RNA–Protein interactions for RNA: ENST00000586607.5

H3F3B-204, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 4 BASIC

Gene H3F3B, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-204ENST00000586607 SCAF1Q9H7N4 1312 aaKnown RBP14.06□□□□□ -0.16
H3F3B-204ENST00000586607 GPRASP1Q5JY77 1395 aa14.06□□□□□ -0.16
H3F3B-204ENST00000586607 ADGRB2O60241 1585 aa14.05□□□□□ -0.16
H3F3B-204ENST00000586607 TRPM1Q7Z4N2 1603 aa14.05□□□□□ -0.16
H3F3B-204ENST00000586607 HSPA1LP34931 641 aa14.05□□□□□ -0.16
H3F3B-204ENST00000586607 PRAM1Q96QH2 718 aa14.05□□□□□ -0.16
H3F3B-204ENST00000586607 TRAK1Q9UPV9 953 aa14.05□□□□□ -0.16
H3F3B-204ENST00000586607 C1orf167Q5SNV9 1468 aa14.05□□□□□ -0.16
H3F3B-204ENST00000586607 NBPF1Q3BBV0 1214 aa14.04□□□□□ -0.16
H3F3B-204ENST00000586607 AHDC1Q5TGY3 1603 aaPredicted RBP14.04□□□□□ -0.16
H3F3B-204ENST00000586607 BRINP3Q76B58 766 aa14.03□□□□□ -0.16
H3F3B-204ENST00000586607 POGKQ9P215 609 aa14.03□□□□□ -0.16
H3F3B-204ENST00000586607 ARHGEF28Q8N1W1 1705 aaKnown RBP14.03□□□□□ -0.16
H3F3B-204ENST00000586607 NBPF8Q3BBV2 869 aa14.02□□□□□ -0.17
H3F3B-204ENST00000586607 RALGAPBQ86X10 1494 aa14.01□□□□□ -0.17
H3F3B-204ENST00000586607 ANKARQ7Z5J8 1434 aa14□□□□□ -0.17
H3F3B-204ENST00000586607 ROCK2O75116 1388 aaKnown RBP14□□□□□ -0.17
H3F3B-204ENST00000586607 EIF3AQ14152 1382 aaKnown RBP14□□□□□ -0.17
H3F3B-204ENST00000586607 FMN2Q9NZ56 1722 aa14□□□□□ -0.17
H3F3B-204ENST00000586607 NHSL1Q5SYE7 1610 aa13.98□□□□□ -0.17
H3F3B-204ENST00000586607 CCER1Q8TC90 406 aaPredicted RBP13.98□□□□□ -0.17
H3F3B-204ENST00000586607 COL16A1Q07092 1604 aaPredicted RBP13.97□□□□□ -0.17
H3F3B-204ENST00000586607 CENPJQ9HC77 1338 aaPredicted RBP13.96□□□□□ -0.17
H3F3B-204ENST00000586607 PHLPP1O60346 1717 aa13.96□□□□□ -0.17
H3F3B-204ENST00000586607 WASLO00401 505 aaPredicted RBP13.96□□□□□ -0.17
H3F3B-204ENST00000586607 ORAI2Q96SN7 254 aa13.96□□□□□ -0.17
H3F3B-204ENST00000586607 SBNO2Q9Y2G9 1366 aa13.96□□□□□ -0.18
H3F3B-204ENST00000586607 TULP4Q9NRJ4 1543 aa13.95□□□□□ -0.18
H3F3B-204ENST00000586607 SAFB2Q14151 953 aaKnown RBP eCLIP13.95□□□□□ -0.18
H3F3B-204ENST00000586607 JCADQ9P266 1359 aa13.95□□□□□ -0.18
H3F3B-204ENST00000586607 KIF1AQ12756 1690 aa13.95□□□□□ -0.18
H3F3B-204ENST00000586607 SOS2Q07890 1332 aaPredicted RBP13.94□□□□□ -0.18
H3F3B-204ENST00000586607 MINK1Q8N4C8 1332 aaPredicted RBP13.94□□□□□ -0.18
H3F3B-204ENST00000586607 ESCO1Q5FWF5 840 aa13.94□□□□□ -0.18
H3F3B-204ENST00000586607 NPHP3Q7Z494 1330 aa13.93□□□□□ -0.18
H3F3B-204ENST00000586607 CARD11Q9BXL7 1154 aa13.93□□□□□ -0.18
H3F3B-204ENST00000586607 USP32Q8NFA0 1604 aa13.93□□□□□ -0.18
H3F3B-204ENST00000586607 LRRC59Q96AG4 307 aaKnown RBP13.92□□□□□ -0.18
H3F3B-204ENST00000586607 HIRIP3Q9BW71 556 aaPredicted RBP13.92□□□□□ -0.18
H3F3B-204ENST00000586607 ATP7BP35670 1465 aa13.92□□□□□ -0.18
H3F3B-204ENST00000586607 PXDNQ92626 1479 aa13.91□□□□□ -0.18
H3F3B-204ENST00000586607 SHPRHQ149N8 1683 aa13.91□□□□□ -0.18
H3F3B-204ENST00000586607 QRICH2Q9H0J4 1663 aa13.91□□□□□ -0.18
H3F3B-204ENST00000586607 SPATA31A6Q5VVP1 1343 aa13.9□□□□□ -0.18
H3F3B-204ENST00000586607 PRR36Q9H6K5 1346 aa13.9□□□□□ -0.18
H3F3B-204ENST00000586607 CDK19Q9BWU1 502 aa13.9□□□□□ -0.18
H3F3B-204ENST00000586607 PHF8Q9UPP1 1060 aa13.9□□□□□ -0.18
H3F3B-204ENST00000586607 NUTM2FA1L443 756 aa13.89□□□□□ -0.19
H3F3B-204ENST00000586607 SLC24A1O60721 1099 aa13.89□□□□□ -0.19
H3F3B-204ENST00000586607 FOXO3O43524 673 aa13.88□□□□□ -0.19
H3F3B-204ENST00000586607 NUDT16Q96DE0 195 aaKnown RBP13.88□□□□□ -0.19
H3F3B-204ENST00000586607 CCDC61Q9Y6R9 512 aa13.88□□□□□ -0.19
H3F3B-204ENST00000586607 EVC2Q86UK5 1308 aa13.88□□□□□ -0.19
H3F3B-204ENST00000586607 MED1Q15648 1581 aaPredicted RBP13.88□□□□□ -0.19
H3F3B-204ENST00000586607 PLEKHG3A1L390 1219 aa13.87□□□□□ -0.19
H3F3B-204ENST00000586607 DDX17Q92841 729 aaKnown RBP13.87□□□□□ -0.19
H3F3B-204ENST00000586607 PUS7Q96PZ0 661 aaKnown RBP13.87□□□□□ -0.19
H3F3B-204ENST00000586607 TOPAZ1Q8N9V7 1692 aa13.87□□□□□ -0.19
H3F3B-204ENST00000586607 ITSN1Q15811 1721 aa13.87□□□□□ -0.19
H3F3B-204ENST00000586607 SBNO1A3KN83 1393 aa13.86□□□□□ -0.19
H3F3B-204ENST00000586607 PNPLA6Q8IY17 1366 aa13.86□□□□□ -0.19
H3F3B-204ENST00000586607 RGPD8O14715 1765 aaPredicted RBP13.86□□□□□ -0.19
H3F3B-204ENST00000586607 POLR3AO14802 1390 aaPredicted RBP13.85□□□□□ -0.19
H3F3B-204ENST00000586607 PSME1Q06323 249 aa13.85□□□□□ -0.19
H3F3B-204ENST00000586607 COL22A1Q8NFW1 1626 aaPredicted RBP13.85□□□□□ -0.19
H3F3B-204ENST00000586607 KRT28Q7Z3Y7 464 aa13.84□□□□□ -0.19
H3F3B-204ENST00000586607 SPATA31A3Q5VYP0 1347 aa13.84□□□□□ -0.19
H3F3B-204ENST00000586607 BRD4O60885 1362 aaPredicted RBP13.83□□□□□ -0.19
H3F3B-204ENST00000586607 ATAD2Q6PL18 1390 aa13.83□□□□□ -0.19
H3F3B-204ENST00000586607 USP47Q96K76 1375 aa13.83□□□□□ -0.19
H3F3B-204ENST00000586607 SRPK2P78362 688 aaKnown RBP13.83□□□□□ -0.2
H3F3B-204ENST00000586607 TESK2Q96S53 571 aa13.83□□□□□ -0.2
H3F3B-204ENST00000586607 TNS3Q68CZ2 1445 aa13.82□□□□□ -0.2
H3F3B-204ENST00000586607 ST20-MTHFSA0A0A6YYL1 179 aa13.82□□□□□ -0.2
H3F3B-204ENST00000586607 PMFBP1Q8TBY8 1022 aa13.82□□□□□ -0.2
H3F3B-204ENST00000586607 CABP2Q9NPB3 220 aa13.81□□□□□ -0.2
H3F3B-204ENST00000586607 LRP6O75581 1613 aa13.81□□□□□ -0.2
H3F3B-204ENST00000586607 ARHGEF10O15013 1369 aa13.81□□□□□ -0.2
H3F3B-204ENST00000586607 PPIP5K1Q6PFW1 1433 aa13.81□□□□□ -0.2
H3F3B-204ENST00000586607 NGDNQ8NEJ9 315 aaKnown RBP13.8□□□□□ -0.2
H3F3B-204ENST00000586607 TRPM3Q9HCF6 1732 aaPredicted RBP13.8□□□□□ -0.2
H3F3B-204ENST00000586607 XPCQ01831 940 aaPredicted RBP13.79□□□□□ -0.2
H3F3B-204ENST00000586607 ACEP12821 1306 aa13.79□□□□□ -0.2
H3F3B-204ENST00000586607 DISP3Q9P2K9 1392 aa13.79□□□□□ -0.2
H3F3B-204ENST00000586607 ALS2Q96Q42 1657 aa13.77□□□□□ -0.21
H3F3B-204ENST00000586607 ZNF692Q9BU19 519 aaPredicted RBP13.77□□□□□ -0.21
H3F3B-204ENST00000586607 CABP1Q9NZU7 370 aa13.77□□□□□ -0.21
H3F3B-204ENST00000586607 NINLQ9Y2I6 1382 aa13.77□□□□□ -0.21
H3F3B-204ENST00000586607 CPSF1Q10570 1443 aaKnown RBP13.76□□□□□ -0.21
H3F3B-204ENST00000586607 SSH2Q76I76 1423 aa13.76□□□□□ -0.21
H3F3B-204ENST00000586607 USP6P35125 1406 aa13.75□□□□□ -0.21
H3F3B-204ENST00000586607 TMF1P82094 1093 aa13.75□□□□□ -0.21
H3F3B-204ENST00000586607 CDCA8Q53HL2 280 aa13.75□□□□□ -0.21
H3F3B-204ENST00000586607 PHF23Q9BUL5 403 aaPredicted RBP13.74□□□□□ -0.21
H3F3B-204ENST00000586607 RGS17Q9UGC6 210 aaPredicted RBP13.74□□□□□ -0.21
H3F3B-204ENST00000586607 EIF4G2P78344 907 aaKnown RBP eCLIP13.73□□□□□ -0.21
H3F3B-204ENST00000586607 CD163L1Q9NR16 1453 aa13.73□□□□□ -0.21
H3F3B-204ENST00000586607 NUTM2BA6NNL0 878 aaPredicted RBP13.72□□□□□ -0.21
H3F3B-204ENST00000586607 NUTM2EB1AL46 878 aaPredicted RBP13.72□□□□□ -0.21
H3F3B-204ENST00000586607 MEX3CQ5U5Q3 659 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms