RNA–Protein interactions for RNA: ENST00000586080.1

R3HDM4-202, Transcript of R3H domain containing 4, humanhuman

TSL 4

Gene R3HDM4, Length 537 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-202ENST00000586080 SIRT1Q96EB6 747 aa31.3■■■□□ 2.6
R3HDM4-202ENST00000586080 POGKQ9P215 609 aa31.3■■■□□ 2.6
R3HDM4-202ENST00000586080 L3MBTL2Q969R5 705 aa31.29■■■□□ 2.6
R3HDM4-202ENST00000586080 MED1Q15648 1581 aaPredicted RBP31.29■■■□□ 2.6
R3HDM4-202ENST00000586080 CDC42BPGQ6DT37 1551 aa31.29■■■□□ 2.6
R3HDM4-202ENST00000586080 AHDC1Q5TGY3 1603 aaPredicted RBP31.27■■■□□ 2.6
R3HDM4-202ENST00000586080 DLC1Q96QB1 1528 aa31.26■■■□□ 2.59
R3HDM4-202ENST00000586080 NUTM2FA1L443 756 aa31.26■■■□□ 2.59
R3HDM4-202ENST00000586080 COL16A1Q07092 1604 aaPredicted RBP31.24■■■□□ 2.59
R3HDM4-202ENST00000586080 DDX17Q92841 729 aaKnown RBP31.24■■■□□ 2.59
R3HDM4-202ENST00000586080 ORAI2Q96SN7 254 aa31.24■■■□□ 2.59
R3HDM4-202ENST00000586080 JCADQ9P266 1359 aa31.23■■■□□ 2.59
R3HDM4-202ENST00000586080 PCGF6Q9BYE7 350 aa31.22■■■□□ 2.59
R3HDM4-202ENST00000586080 ESCO1Q5FWF5 840 aa31.2■■■□□ 2.59
R3HDM4-202ENST00000586080 PHF23Q9BUL5 403 aaPredicted RBP31.2■■■□□ 2.59
R3HDM4-202ENST00000586080 NBPF1Q3BBV0 1214 aa31.17■■■□□ 2.58
R3HDM4-202ENST00000586080 HIRIP3Q9BW71 556 aaPredicted RBP31.16■■■□□ 2.58
R3HDM4-202ENST00000586080 MINK1Q8N4C8 1332 aaPredicted RBP31.16■■■□□ 2.58
R3HDM4-202ENST00000586080 NHSL1Q5SYE7 1610 aa31.15■■■□□ 2.58
R3HDM4-202ENST00000586080 KIAA1210Q9ULL0 1709 aa31.13■■■□□ 2.57
R3HDM4-202ENST00000586080 TONSLQ96HA7 1378 aa31.13■■■□□ 2.57
R3HDM4-202ENST00000586080 FMN2Q9NZ56 1722 aa31.11■■■□□ 2.57
R3HDM4-202ENST00000586080 LRRC59Q96AG4 307 aaKnown RBP31.1■■■□□ 2.57
R3HDM4-202ENST00000586080 NPHP3Q7Z494 1330 aa31.08■■■□□ 2.57
R3HDM4-202ENST00000586080 ARHGEF28Q8N1W1 1705 aaKnown RBP31.07■■■□□ 2.56
R3HDM4-202ENST00000586080 SPATA31A6Q5VVP1 1343 aa31.07■■■□□ 2.56
R3HDM4-202ENST00000586080 ADGRB2O60241 1585 aa31.07■■■□□ 2.56
R3HDM4-202ENST00000586080 FOXO3O43524 673 aa31.06■■■□□ 2.56
R3HDM4-202ENST00000586080 SOS2Q07890 1332 aaPredicted RBP31.05■■■□□ 2.56
R3HDM4-202ENST00000586080 XPCQ01831 940 aaPredicted RBP31.05■■■□□ 2.56
R3HDM4-202ENST00000586080 ILDR2Q71H61 639 aa31.04■■■□□ 2.56
R3HDM4-202ENST00000586080 ROCK2O75116 1388 aaKnown RBP31.04■■■□□ 2.56
R3HDM4-202ENST00000586080 SHPRHQ149N8 1683 aa31.03■■■□□ 2.56
R3HDM4-202ENST00000586080 NUTM2BA6NNL0 878 aaPredicted RBP31.03■■■□□ 2.56
R3HDM4-202ENST00000586080 NUTM2EB1AL46 878 aaPredicted RBP31.03■■■□□ 2.56
R3HDM4-202ENST00000586080 MEX3CQ5U5Q3 659 aaKnown RBP31.03■■■□□ 2.56
R3HDM4-202ENST00000586080 NUTM2AQ8IVF1 878 aaPredicted RBP31.03■■■□□ 2.56
R3HDM4-202ENST00000586080 WASLO00401 505 aaPredicted RBP31.02■■■□□ 2.56
R3HDM4-202ENST00000586080 EIF3AQ14152 1382 aaKnown RBP31.02■■■□□ 2.56
R3HDM4-202ENST00000586080 ANKARQ7Z5J8 1434 aa31.01■■■□□ 2.55
R3HDM4-202ENST00000586080 PHF8Q9UPP1 1060 aa31.01■■■□□ 2.55
R3HDM4-202ENST00000586080 PNPLA6Q8IY17 1366 aa31.01■■■□□ 2.55
R3HDM4-202ENST00000586080 LRP6O75581 1613 aa31■■■□□ 2.55
R3HDM4-202ENST00000586080 NBPF8Q3BBV2 869 aa31■■■□□ 2.55
R3HDM4-202ENST00000586080 TRPM1Q7Z4N2 1603 aa30.99■■■□□ 2.55
R3HDM4-202ENST00000586080 CENPJQ9HC77 1338 aaPredicted RBP30.98■■■□□ 2.55
R3HDM4-202ENST00000586080 KIF1AQ12756 1690 aa30.97■■■□□ 2.55
R3HDM4-202ENST00000586080 TULP4Q9NRJ4 1543 aa30.97■■■□□ 2.55
R3HDM4-202ENST00000586080 PXDNQ92626 1479 aa30.96■■■□□ 2.55
R3HDM4-202ENST00000586080 PMFBP1Q8TBY8 1022 aa30.96■■■□□ 2.55
R3HDM4-202ENST00000586080 PRR36Q9H6K5 1346 aa30.95■■■□□ 2.54
R3HDM4-202ENST00000586080 USP32Q8NFA0 1604 aa30.93■■■□□ 2.54
R3HDM4-202ENST00000586080 KRT28Q7Z3Y7 464 aa30.92■■■□□ 2.54
R3HDM4-202ENST00000586080 CDK19Q9BWU1 502 aa30.92■■■□□ 2.54
R3HDM4-202ENST00000586080 RGS17Q9UGC6 210 aaPredicted RBP30.91■■■□□ 2.54
R3HDM4-202ENST00000586080 RGPD8O14715 1765 aaPredicted RBP30.9■■■□□ 2.54
R3HDM4-202ENST00000586080 PSME1Q06323 249 aa30.88■■■□□ 2.53
R3HDM4-202ENST00000586080 NUDT16Q96DE0 195 aaKnown RBP30.88■■■□□ 2.53
R3HDM4-202ENST00000586080 CARD11Q9BXL7 1154 aa30.88■■■□□ 2.53
R3HDM4-202ENST00000586080 ATP7BP35670 1465 aa30.87■■■□□ 2.53
R3HDM4-202ENST00000586080 GPRASP1Q5JY77 1395 aa30.86■■■□□ 2.53
R3HDM4-202ENST00000586080 RALGAPBQ86X10 1494 aa30.86■■■□□ 2.53
R3HDM4-202ENST00000586080 ADAMTS2O95450 1211 aa30.85■■■□□ 2.53
R3HDM4-202ENST00000586080 SRPK2P78362 688 aaKnown RBP30.85■■■□□ 2.53
R3HDM4-202ENST00000586080 NGDNQ8NEJ9 315 aaKnown RBP30.85■■■□□ 2.53
R3HDM4-202ENST00000586080 SPATA31A3Q5VYP0 1347 aa30.84■■■□□ 2.53
R3HDM4-202ENST00000586080 QRICH2Q9H0J4 1663 aa30.84■■■□□ 2.53
R3HDM4-202ENST00000586080 LMOD2Q6P5Q4 547 aa30.83■■■□□ 2.53
R3HDM4-202ENST00000586080 CCER1Q8TC90 406 aaPredicted RBP30.83■■■□□ 2.53
R3HDM4-202ENST00000586080 CLSPNQ9HAW4 1339 aa30.82■■■□□ 2.52
R3HDM4-202ENST00000586080 C8orf37Q96NL8 207 aa30.82■■■□□ 2.52
R3HDM4-202ENST00000586080 TNS3Q68CZ2 1445 aa30.81■■■□□ 2.52
R3HDM4-202ENST00000586080 POTEAQ6S8J7 498 aa30.81■■■□□ 2.52
R3HDM4-202ENST00000586080 CABP2Q9NPB3 220 aa30.8■■■□□ 2.52
R3HDM4-202ENST00000586080 PLEKHG5O94827 1062 aa30.79■■■□□ 2.52
R3HDM4-202ENST00000586080 SBNO1A3KN83 1393 aa30.79■■■□□ 2.52
R3HDM4-202ENST00000586080 COL22A1Q8NFW1 1626 aaPredicted RBP30.78■■■□□ 2.52
R3HDM4-202ENST00000586080 CCDC61Q9Y6R9 512 aa30.78■■■□□ 2.52
R3HDM4-202ENST00000586080 AFF2P51816 1311 aa30.77■■■□□ 2.52
R3HDM4-202ENST00000586080 ZNF772Q68DY9 489 aaPredicted RBP30.77■■■□□ 2.52
R3HDM4-202ENST00000586080 ITSN1Q15811 1721 aa30.76■■■□□ 2.51
R3HDM4-202ENST00000586080 EVC2Q86UK5 1308 aa30.75■■■□□ 2.51
R3HDM4-202ENST00000586080 NGLY1Q96IV0 654 aa30.74■■■□□ 2.51
R3HDM4-202ENST00000586080 PAK3O75914 559 aaPredicted RBP30.73■■■□□ 2.51
R3HDM4-202ENST00000586080 HAP1P54257 671 aaPredicted RBP30.73■■■□□ 2.51
R3HDM4-202ENST00000586080 ARHGEF10O15013 1369 aa30.73■■■□□ 2.51
R3HDM4-202ENST00000586080 PPIP5K1Q6PFW1 1433 aa30.71■■■□□ 2.51
R3HDM4-202ENST00000586080 ACEP12821 1306 aa30.71■■■□□ 2.51
R3HDM4-202ENST00000586080 TOPAZ1Q8N9V7 1692 aa30.7■■■□□ 2.5
R3HDM4-202ENST00000586080 SOCS7O14512 581 aa30.69■■■□□ 2.5
R3HDM4-202ENST00000586080 CABLES1Q8TDN4 633 aa30.69■■■□□ 2.5
R3HDM4-202ENST00000586080 PLEKHG3A1L390 1219 aa30.68■■■□□ 2.5
R3HDM4-202ENST00000586080 TIMELESSQ9UNS1 1208 aa30.68■■■□□ 2.5
R3HDM4-202ENST00000586080 POLR3AO14802 1390 aaPredicted RBP30.66■■■□□ 2.5
R3HDM4-202ENST00000586080 TRPM3Q9HCF6 1732 aaPredicted RBP30.66■■■□□ 2.5
R3HDM4-202ENST00000586080 CABP1Q9NZU7 370 aa30.64■■■□□ 2.5
R3HDM4-202ENST00000586080 SBNO2Q9Y2G9 1366 aa30.64■■■□□ 2.5
R3HDM4-202ENST00000586080 USP21Q9UK80 565 aa30.62■■■□□ 2.49
R3HDM4-202ENST00000586080 ATAD2Q6PL18 1390 aa30.59■■■□□ 2.49
R3HDM4-202ENST00000586080 QTRT2Q9H974 415 aaKnown RBP30.59■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms