RNA–Protein interactions for RNA: ENST00000585752.5

ATG4D-203, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 729 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-203ENST00000585752 MYOM2P54296 1465 aa27.3■■□□□ 1.96
ATG4D-203ENST00000585752 ORAI2Q96SN7 254 aa27.29■■□□□ 1.96
ATG4D-203ENST00000585752 C14orf93Q9H972 538 aaKnown RBP27.29■■□□□ 1.96
ATG4D-203ENST00000585752 ABCC11Q96J66 1382 aa27.29■■□□□ 1.96
ATG4D-203ENST00000585752 YTHDC2Q9H6S0 1430 aaKnown RBP27.29■■□□□ 1.96
ATG4D-203ENST00000585752 TECPR2O15040 1411 aa27.28■■□□□ 1.96
ATG4D-203ENST00000585752 ESCO1Q5FWF5 840 aa27.28■■□□□ 1.96
ATG4D-203ENST00000585752 POTEAQ6S8J7 498 aa27.28■■□□□ 1.96
ATG4D-203ENST00000585752 CDC42BPGQ6DT37 1551 aa27.27■■□□□ 1.96
ATG4D-203ENST00000585752 CFAP70Q5T0N1 1121 aa27.27■■□□□ 1.96
ATG4D-203ENST00000585752 ZNF772Q68DY9 489 aaPredicted RBP27.27■■□□□ 1.96
ATG4D-203ENST00000585752 KDM2AQ9Y2K7 1162 aa27.27■■□□□ 1.96
ATG4D-203ENST00000585752 DCAF11Q8TEB1 546 aa27.25■■□□□ 1.95
ATG4D-203ENST00000585752 LRP6O75581 1613 aa27.25■■□□□ 1.95
ATG4D-203ENST00000585752 NUTM2FA1L443 756 aa27.24■■□□□ 1.95
ATG4D-203ENST00000585752 NRXN1Q9ULB1 1477 aa27.23■■□□□ 1.95
ATG4D-203ENST00000585752 SIRT1Q96EB6 747 aa27.22■■□□□ 1.95
ATG4D-203ENST00000585752 STAC3Q96MF2 364 aa27.21■■□□□ 1.95
ATG4D-203ENST00000585752 POGKQ9P215 609 aa27.21■■□□□ 1.95
ATG4D-203ENST00000585752 NPHP3Q7Z494 1330 aa27.2■■□□□ 1.95
ATG4D-203ENST00000585752 PNPLA6Q8IY17 1366 aa27.2■■□□□ 1.94
ATG4D-203ENST00000585752 PLEKHH1Q9ULM0 1364 aa27.19■■□□□ 1.94
ATG4D-203ENST00000585752 SOS2Q07890 1332 aaPredicted RBP27.18■■□□□ 1.94
ATG4D-203ENST00000585752 SAFB2Q14151 953 aaKnown RBP eCLIP27.17■■□□□ 1.94
ATG4D-203ENST00000585752 C8orf37Q96NL8 207 aa27.17■■□□□ 1.94
ATG4D-203ENST00000585752 FMN2Q9NZ56 1722 aa27.16■■□□□ 1.94
ATG4D-203ENST00000585752 FOXO3O43524 673 aa27.15■■□□□ 1.94
ATG4D-203ENST00000585752 PRAM1Q96QH2 718 aa27.15■■□□□ 1.94
ATG4D-203ENST00000585752 AFF2P51816 1311 aa27.14■■□□□ 1.93
ATG4D-203ENST00000585752 ADAMTS2O95450 1211 aa27.13■■□□□ 1.93
ATG4D-203ENST00000585752 RGPD8O14715 1765 aaPredicted RBP27.12■■□□□ 1.93
ATG4D-203ENST00000585752 TRAK1Q9UPV9 953 aa27.12■■□□□ 1.93
ATG4D-203ENST00000585752 KIF1AQ12756 1690 aa27.11■■□□□ 1.93
ATG4D-203ENST00000585752 RXRBP28702 533 aa27.11■■□□□ 1.93
ATG4D-203ENST00000585752 NGLY1Q96IV0 654 aa27.11■■□□□ 1.93
ATG4D-203ENST00000585752 XPCQ01831 940 aaPredicted RBP27.1■■□□□ 1.93
ATG4D-203ENST00000585752 DLC1Q96QB1 1528 aa27.1■■□□□ 1.93
ATG4D-203ENST00000585752 PCGF6Q9BYE7 350 aa27.09■■□□□ 1.93
ATG4D-203ENST00000585752 PSME1Q06323 249 aa27.05■■□□□ 1.92
ATG4D-203ENST00000585752 PHF8Q9UPP1 1060 aa27.05■■□□□ 1.92
ATG4D-203ENST00000585752 QTRT2Q9H974 415 aaKnown RBP27.04■■□□□ 1.92
ATG4D-203ENST00000585752 PXDNQ92626 1479 aa27.04■■□□□ 1.92
ATG4D-203ENST00000585752 ADGRB1O14514 1584 aa27.04■■□□□ 1.92
ATG4D-203ENST00000585752 COL22A1Q8NFW1 1626 aaPredicted RBP27.04■■□□□ 1.92
ATG4D-203ENST00000585752 KRT28Q7Z3Y7 464 aa27.03■■□□□ 1.92
ATG4D-203ENST00000585752 MINK1Q8N4C8 1332 aaPredicted RBP27.01■■□□□ 1.91
ATG4D-203ENST00000585752 HIRIP3Q9BW71 556 aaPredicted RBP27.01■■□□□ 1.91
ATG4D-203ENST00000585752 EIF3AQ14152 1382 aaKnown RBP27■■□□□ 1.91
ATG4D-203ENST00000585752 HAP1P54257 671 aaPredicted RBP27■■□□□ 1.91
ATG4D-203ENST00000585752 MARF1Q9Y4F3 1742 aaKnown RBP26.99■■□□□ 1.91
ATG4D-203ENST00000585752 USP21Q9UK80 565 aa26.99■■□□□ 1.91
ATG4D-203ENST00000585752 RBM6P78332 1123 aaKnown RBP26.97■■□□□ 1.91
ATG4D-203ENST00000585752 LMOD2Q6P5Q4 547 aa26.97■■□□□ 1.91
ATG4D-203ENST00000585752 ADGRB2O60241 1585 aa26.97■■□□□ 1.91
ATG4D-203ENST00000585752 PMFBP1Q8TBY8 1022 aa26.96■■□□□ 1.91
ATG4D-203ENST00000585752 ANKARQ7Z5J8 1434 aa26.96■■□□□ 1.91
ATG4D-203ENST00000585752 KIAA1210Q9ULL0 1709 aa26.96■■□□□ 1.91
ATG4D-203ENST00000585752 SPATA31A3Q5VYP0 1347 aa26.95■■□□□ 1.91
ATG4D-203ENST00000585752 TRPC5Q9UL62 973 aaPredicted RBP26.95■■□□□ 1.9
ATG4D-203ENST00000585752 ARHGEF28Q8N1W1 1705 aaKnown RBP26.95■■□□□ 1.9
ATG4D-203ENST00000585752 WASLO00401 505 aaPredicted RBP26.93■■□□□ 1.9
ATG4D-203ENST00000585752 CDK12Q9NYV4 1490 aaPredicted RBP26.93■■□□□ 1.9
ATG4D-203ENST00000585752 PLEKHG5O94827 1062 aa26.92■■□□□ 1.9
ATG4D-203ENST00000585752 GPRASP1Q5JY77 1395 aa26.9■■□□□ 1.9
ATG4D-203ENST00000585752 USP32Q8NFA0 1604 aa26.9■■□□□ 1.9
ATG4D-203ENST00000585752 TNS3Q68CZ2 1445 aa26.9■■□□□ 1.9
ATG4D-203ENST00000585752 FNBP4Q8N3X1 1017 aaPredicted RBP26.89■■□□□ 1.9
ATG4D-203ENST00000585752 ITSN1Q15811 1721 aa26.89■■□□□ 1.9
ATG4D-203ENST00000585752 TULP4Q9NRJ4 1543 aa26.89■■□□□ 1.89
ATG4D-203ENST00000585752 SBNO1A3KN83 1393 aa26.88■■□□□ 1.89
ATG4D-203ENST00000585752 ARHGEF10O15013 1369 aa26.87■■□□□ 1.89
ATG4D-203ENST00000585752 NEUROD1Q13562 356 aa26.87■■□□□ 1.89
ATG4D-203ENST00000585752 NGDNQ8NEJ9 315 aaKnown RBP26.87■■□□□ 1.89
ATG4D-203ENST00000585752 PAK3O75914 559 aaPredicted RBP26.82■■□□□ 1.88
ATG4D-203ENST00000585752 NBPF1Q3BBV0 1214 aa26.82■■□□□ 1.88
ATG4D-203ENST00000585752 SIN3AQ96ST3 1273 aa26.82■■□□□ 1.88
ATG4D-203ENST00000585752 L3MBTL2Q969R5 705 aa26.81■■□□□ 1.88
ATG4D-203ENST00000585752 CDK19Q9BWU1 502 aa26.81■■□□□ 1.88
ATG4D-203ENST00000585752 CABLES1Q8TDN4 633 aa26.8■■□□□ 1.88
ATG4D-203ENST00000585752 UPF1Q92900 1129 aaKnown RBP eCLIP26.8■■□□□ 1.88
ATG4D-203ENST00000585752 NUDT16Q96DE0 195 aaKnown RBP26.8■■□□□ 1.88
ATG4D-203ENST00000585752 PRR36Q9H6K5 1346 aa26.8■■□□□ 1.88
ATG4D-203ENST00000585752 RGS12O14924 1447 aa26.8■■□□□ 1.88
ATG4D-203ENST00000585752 ATRNO75882 1429 aa26.79■■□□□ 1.88
ATG4D-203ENST00000585752 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.78■■□□□ 1.88
ATG4D-203ENST00000585752 UNC5CLQ8IV45 518 aa26.77■■□□□ 1.88
ATG4D-203ENST00000585752 TRPM3Q9HCF6 1732 aaPredicted RBP26.76■■□□□ 1.88
ATG4D-203ENST00000585752 BCL9LQ86UU0 1499 aa26.76■■□□□ 1.87
ATG4D-203ENST00000585752 CENPJQ9HC77 1338 aaPredicted RBP26.76■■□□□ 1.87
ATG4D-203ENST00000585752 GJD4Q96KN9 370 aaPredicted RBP26.76■■□□□ 1.87
ATG4D-203ENST00000585752 SRPK2P78362 688 aaKnown RBP26.75■■□□□ 1.87
ATG4D-203ENST00000585752 ABCA3Q99758 1704 aa26.74■■□□□ 1.87
ATG4D-203ENST00000585752 CCDC9Q9Y3X0 531 aaKnown RBP26.73■■□□□ 1.87
ATG4D-203ENST00000585752 CCDC61Q9Y6R9 512 aa26.73■■□□□ 1.87
ATG4D-203ENST00000585752 ATP7BP35670 1465 aa26.73■■□□□ 1.87
ATG4D-203ENST00000585752 PLCH1Q4KWH8 1693 aa26.72■■□□□ 1.87
ATG4D-203ENST00000585752 ALS2Q96Q42 1657 aa26.72■■□□□ 1.87
ATG4D-203ENST00000585752 QRICH2Q9H0J4 1663 aa26.72■■□□□ 1.87
ATG4D-203ENST00000585752 ATAD2Q6PL18 1390 aa26.71■■□□□ 1.87
ATG4D-203ENST00000585752 NWD2Q9ULI1 1742 aa26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms