RNA–Protein interactions for RNA: ENST00000585026.1

CSNK1D-226, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-226ENST00000585026 ATAD2Q6PL18 1390 aa16.06■□□□□ 0.16
CSNK1D-226ENST00000585026 FNBP4Q8N3X1 1017 aaPredicted RBP16.06■□□□□ 0.16
CSNK1D-226ENST00000585026 LRPPRCP42704 1394 aaKnown RBP16.05■□□□□ 0.16
CSNK1D-226ENST00000585026 LAMC1P11047 1609 aa16.02■□□□□ 0.16
CSNK1D-226ENST00000585026 FOXO3O43524 673 aa16■□□□□ 0.15
CSNK1D-226ENST00000585026 CCDC125Q86Z20 511 aa16■□□□□ 0.15
CSNK1D-226ENST00000585026 STK26Q9P289 416 aa16■□□□□ 0.15
CSNK1D-226ENST00000585026 CCDC144AA2RUR9 1427 aa16■□□□□ 0.15
CSNK1D-226ENST00000585026 ANKRD30BQ9BXX2 1392 aa16■□□□□ 0.15
CSNK1D-226ENST00000585026 RGL3Q3MIN7 710 aa15.99■□□□□ 0.15
CSNK1D-226ENST00000585026 ATRNO75882 1429 aa15.98■□□□□ 0.15
CSNK1D-226ENST00000585026 ZRANB1Q9UGI0 708 aa15.98■□□□□ 0.15
CSNK1D-226ENST00000585026 ADGRF5Q8IZF2 1346 aa15.97■□□□□ 0.15
CSNK1D-226ENST00000585026 ACIN1Q9UKV3 1341 aaKnown RBP15.97■□□□□ 0.15
CSNK1D-226ENST00000585026 CDC42BPGQ6DT37 1551 aa15.97■□□□□ 0.15
CSNK1D-226ENST00000585026 ABCC11Q96J66 1382 aa15.97■□□□□ 0.15
CSNK1D-226ENST00000585026 MYOM2P54296 1465 aa15.97■□□□□ 0.15
CSNK1D-226ENST00000585026 XPCQ01831 940 aaPredicted RBP15.96■□□□□ 0.15
CSNK1D-226ENST00000585026 WAPLQ7Z5K2 1190 aa15.96■□□□□ 0.15
CSNK1D-226ENST00000585026 GJD4Q96KN9 370 aaPredicted RBP15.96■□□□□ 0.15
CSNK1D-226ENST00000585026 TECPR2O15040 1411 aa15.95■□□□□ 0.14
CSNK1D-226ENST00000585026 NUTM2FA1L443 756 aa15.95■□□□□ 0.14
CSNK1D-226ENST00000585026 COL22A1Q8NFW1 1626 aaPredicted RBP15.94■□□□□ 0.14
CSNK1D-226ENST00000585026 PXDNQ92626 1479 aa15.94■□□□□ 0.14
CSNK1D-226ENST00000585026 PPLO60437 1756 aa15.94■□□□□ 0.14
CSNK1D-226ENST00000585026 HAP1P54257 671 aaPredicted RBP15.93■□□□□ 0.14
CSNK1D-226ENST00000585026 PSME1Q06323 249 aa15.93■□□□□ 0.14
CSNK1D-226ENST00000585026 TMEM132EQ6IEE7 984 aa15.93■□□□□ 0.14
CSNK1D-226ENST00000585026 UNC5CLQ8IV45 518 aa15.93■□□□□ 0.14
CSNK1D-226ENST00000585026 SIRT1Q96EB6 747 aa15.93■□□□□ 0.14
CSNK1D-226ENST00000585026 MPHOSPH9Q99550 1183 aa15.93■□□□□ 0.14
CSNK1D-226ENST00000585026 BCL9LQ86UU0 1499 aa15.92■□□□□ 0.14
CSNK1D-226ENST00000585026 SPATA31A3Q5VYP0 1347 aa15.92■□□□□ 0.14
CSNK1D-226ENST00000585026 KRT28Q7Z3Y7 464 aa15.91■□□□□ 0.14
CSNK1D-226ENST00000585026 SPATA31E1Q6ZUB1 1445 aa15.91■□□□□ 0.14
CSNK1D-226ENST00000585026 YTHDC2Q9H6S0 1430 aaKnown RBP15.89■□□□□ 0.13
CSNK1D-226ENST00000585026 DHX57Q6P158 1386 aaKnown RBP15.88■□□□□ 0.13
CSNK1D-226ENST00000585026 PIK3C2GO75747 1445 aa15.88■□□□□ 0.13
CSNK1D-226ENST00000585026 SF3B2Q13435 895 aaKnown RBP15.88■□□□□ 0.13
CSNK1D-226ENST00000585026 C14orf93Q9H972 538 aaKnown RBP15.88■□□□□ 0.13
CSNK1D-226ENST00000585026 PHF8Q9UPP1 1060 aa15.88■□□□□ 0.13
CSNK1D-226ENST00000585026 PLEKHH1Q9ULM0 1364 aa15.87■□□□□ 0.13
CSNK1D-226ENST00000585026 SLIT2O94813 1529 aa15.86■□□□□ 0.13
CSNK1D-226ENST00000585026 LMOD2Q6P5Q4 547 aa15.85■□□□□ 0.13
CSNK1D-226ENST00000585026 CCDC9Q9Y3X0 531 aaKnown RBP15.85■□□□□ 0.13
CSNK1D-226ENST00000585026 KIF1AQ12756 1690 aa15.85■□□□□ 0.13
CSNK1D-226ENST00000585026 BLMP54132 1417 aaPredicted RBP15.85■□□□□ 0.13
CSNK1D-226ENST00000585026 RALGAPBQ86X10 1494 aa15.84■□□□□ 0.13
CSNK1D-226ENST00000585026 VPS72Q15906 364 aa15.84■□□□□ 0.13
CSNK1D-226ENST00000585026 POGKQ9P215 609 aa15.84■□□□□ 0.13
CSNK1D-226ENST00000585026 SBNO1A3KN83 1393 aa15.84■□□□□ 0.13
CSNK1D-226ENST00000585026 ARHGEF10O15013 1369 aa15.84■□□□□ 0.13
CSNK1D-226ENST00000585026 TNS3Q68CZ2 1445 aa15.84■□□□□ 0.13
CSNK1D-226ENST00000585026 CFAP70Q5T0N1 1121 aa15.83■□□□□ 0.12
CSNK1D-226ENST00000585026 SEPT12Q8IYM1 358 aa15.83■□□□□ 0.12
CSNK1D-226ENST00000585026 PRAM1Q96QH2 718 aa15.83■□□□□ 0.12
CSNK1D-226ENST00000585026 KNDC1Q76NI1 1749 aa15.82■□□□□ 0.12
CSNK1D-226ENST00000585026 SAFB2Q14151 953 aaKnown RBP eCLIP15.81■□□□□ 0.121e-12■■■■■ 37.9
CSNK1D-226ENST00000585026 FMN2Q9NZ56 1722 aa15.81■□□□□ 0.12
CSNK1D-226ENST00000585026 MARF1Q9Y4F3 1742 aaKnown RBP15.81■□□□□ 0.12
CSNK1D-226ENST00000585026 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.8■□□□□ 0.12
CSNK1D-226ENST00000585026 ONECUT3O60422 494 aaPredicted RBP15.8■□□□□ 0.12
CSNK1D-226ENST00000585026 PLEKHG5O94827 1062 aa15.8■□□□□ 0.12
CSNK1D-226ENST00000585026 CABLES1Q8TDN4 633 aa15.8■□□□□ 0.12
CSNK1D-226ENST00000585026 EIF3AQ14152 1382 aaKnown RBP15.79■□□□□ 0.12
CSNK1D-226ENST00000585026 A0A0G2JS52 829 aa15.79■□□□□ 0.12
CSNK1D-226ENST00000585026 MYT1Q01538 1121 aa15.79■□□□□ 0.12
CSNK1D-226ENST00000585026 KRT27Q7Z3Y8 459 aa15.79■□□□□ 0.12
CSNK1D-226ENST00000585026 USP32Q8NFA0 1604 aa15.79■□□□□ 0.12
CSNK1D-226ENST00000585026 NRXN1Q9ULB1 1477 aa15.78■□□□□ 0.12
CSNK1D-226ENST00000585026 ANKARQ7Z5J8 1434 aa15.78■□□□□ 0.12
CSNK1D-226ENST00000585026 GPRASP1Q5JY77 1395 aa15.78■□□□□ 0.12
CSNK1D-226ENST00000585026 IFT172Q9UG01 1749 aa15.78■□□□□ 0.12
CSNK1D-226ENST00000585026 PMFBP1Q8TBY8 1022 aa15.77■□□□□ 0.12
CSNK1D-226ENST00000585026 GLI3P10071 1580 aa15.77■□□□□ 0.11
CSNK1D-226ENST00000585026 FAM83GA6ND36 823 aa15.76■□□□□ 0.11
CSNK1D-226ENST00000585026 DEFB132Q7Z7B7 95 aa15.76■□□□□ 0.11
CSNK1D-226ENST00000585026 STAC3Q96MF2 364 aa15.76■□□□□ 0.11
CSNK1D-226ENST00000585026 BAG6P46379 1132 aa15.75■□□□□ 0.11
CSNK1D-226ENST00000585026 DLC1Q96QB1 1528 aa15.74■□□□□ 0.11
CSNK1D-226ENST00000585026 NGDNQ8NEJ9 315 aaKnown RBP15.73■□□□□ 0.11
CSNK1D-226ENST00000585026 BTG4Q9NY30 223 aa15.73■□□□□ 0.11
CSNK1D-226ENST00000585026 TRAK1Q9UPV9 953 aa15.73■□□□□ 0.11
CSNK1D-226ENST00000585026 NWD2Q9ULI1 1742 aa15.71■□□□□ 0.11
CSNK1D-226ENST00000585026 WASLO00401 505 aaPredicted RBP15.71■□□□□ 0.11
CSNK1D-226ENST00000585026 TRIM26Q12899 539 aaPredicted RBP15.71■□□□□ 0.11
CSNK1D-226ENST00000585026 FAM98CQ17RN3 349 aaKnown RBP15.71■□□□□ 0.11
CSNK1D-226ENST00000585026 HIRIP3Q9BW71 556 aaPredicted RBP15.71■□□□□ 0.11
CSNK1D-226ENST00000585026 MINK1Q8N4C8 1332 aaPredicted RBP15.7■□□□□ 0.1
CSNK1D-226ENST00000585026 PAK3O75914 559 aaPredicted RBP15.7■□□□□ 0.1
CSNK1D-226ENST00000585026 DCAF11Q8TEB1 546 aa15.7■□□□□ 0.1
CSNK1D-226ENST00000585026 KDM2AQ9Y2K7 1162 aa15.7■□□□□ 0.1
CSNK1D-226ENST00000585026 SRCAPQ6ZRS2 3230 aa15.7■□□□□ 0.1
CSNK1D-226ENST00000585026 EP400Q96L91 3159 aa15.69■□□□□ 0.1
CSNK1D-226ENST00000585026 ADGRB2O60241 1585 aa15.68■□□□□ 0.1
CSNK1D-226ENST00000585026 PRDM11Q9NQV5 511 aa15.68■□□□□ 0.1
CSNK1D-226ENST00000585026 RGPD8O14715 1765 aaPredicted RBP15.67■□□□□ 0.1
CSNK1D-226ENST00000585026 SPATA31A5Q5VU36 1347 aa15.67■□□□□ 0.1
CSNK1D-226ENST00000585026 SPATA31A7Q8IWB4 1347 aa15.67■□□□□ 0.1
CSNK1D-226ENST00000585026 PLCH1Q4KWH8 1693 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms