RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 XRN1Q8IZH2 1706 aaKnown RBP19.22■□□□□ 0.67
UBBP4-202ENST00000584755 PTCH1Q13635 1447 aa19.22■□□□□ 0.67
UBBP4-202ENST00000584755 ROBO2Q9HCK4 1378 aa19.21■□□□□ 0.67
UBBP4-202ENST00000584755 SAFB2Q14151 953 aaKnown RBP eCLIP19.21■□□□□ 0.67
UBBP4-202ENST00000584755 WAPLQ7Z5K2 1190 aa19.21■□□□□ 0.67
UBBP4-202ENST00000584755 KTN1Q86UP2 1357 aaKnown RBP19.2■□□□□ 0.66
UBBP4-202ENST00000584755 MINK1Q8N4C8 1332 aaPredicted RBP19.19■□□□□ 0.66
UBBP4-202ENST00000584755 NPHP4O75161 1426 aaPredicted RBP19.19■□□□□ 0.66
UBBP4-202ENST00000584755 ADGRB2O60241 1585 aa19.19■□□□□ 0.66
UBBP4-202ENST00000584755 NINLQ9Y2I6 1382 aa19.18■□□□□ 0.66
UBBP4-202ENST00000584755 ATAD2Q6PL18 1390 aa19.17■□□□□ 0.66
UBBP4-202ENST00000584755 AMOTL2Q9Y2J4 779 aa19.16■□□□□ 0.66
UBBP4-202ENST00000584755 CHD2O14647 1828 aaKnown RBP19.16■□□□□ 0.66
UBBP4-202ENST00000584755 NPC1L1Q9UHC9 1359 aa19.16■□□□□ 0.66
UBBP4-202ENST00000584755 PARD3Q8TEW0 1356 aa19.15■□□□□ 0.66
UBBP4-202ENST00000584755 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.15■□□□□ 0.66
UBBP4-202ENST00000584755 CABP2Q9NPB3 220 aa19.15■□□□□ 0.66
UBBP4-202ENST00000584755 RALBP1Q15311 655 aa19.14■□□□□ 0.65
UBBP4-202ENST00000584755 CDK19Q9BWU1 502 aa19.14■□□□□ 0.65
UBBP4-202ENST00000584755 LMTK3Q96Q04 1460 aa19.12■□□□□ 0.65
UBBP4-202ENST00000584755 WASLO00401 505 aaPredicted RBP19.12■□□□□ 0.65
UBBP4-202ENST00000584755 SRPK2P78362 688 aaKnown RBP19.12■□□□□ 0.65
UBBP4-202ENST00000584755 AMER1Q5JTC6 1135 aaPredicted RBP19.12■□□□□ 0.65
UBBP4-202ENST00000584755 SLC12A5Q9H2X9 1139 aa19.12■□□□□ 0.65
UBBP4-202ENST00000584755 KNSTRNQ9Y448 316 aa19.12■□□□□ 0.65
UBBP4-202ENST00000584755 ANKRD36BQ8N2N9 1353 aa19.12■□□□□ 0.65
UBBP4-202ENST00000584755 USP32Q8NFA0 1604 aa19.11■□□□□ 0.65
UBBP4-202ENST00000584755 CARD14Q9BXL6 1004 aa19.11■□□□□ 0.65
UBBP4-202ENST00000584755 NCKAP5LQ9HCH0 1330 aa19.11■□□□□ 0.65
UBBP4-202ENST00000584755 NWD1Q149M9 1564 aa19.1■□□□□ 0.65
UBBP4-202ENST00000584755 TMC1Q8TDI8 760 aa19.09■□□□□ 0.65
UBBP4-202ENST00000584755 CD163L1Q9NR16 1453 aa19.08■□□□□ 0.65
UBBP4-202ENST00000584755 KCNA6P17658 529 aa19.08■□□□□ 0.64
UBBP4-202ENST00000584755 MYBBP1AQ9BQG0 1328 aaKnown RBP19.07■□□□□ 0.64
UBBP4-202ENST00000584755 ATP7BP35670 1465 aa19.06■□□□□ 0.64
UBBP4-202ENST00000584755 NSD3Q9BZ95 1437 aa19.06■□□□□ 0.64
UBBP4-202ENST00000584755 CCDC184Q52MB2 194 aa19.05■□□□□ 0.64
UBBP4-202ENST00000584755 A0A1W2PP64 1363 aa19.04■□□□□ 0.64
UBBP4-202ENST00000584755 BRD4O60885 1362 aaPredicted RBP19.04■□□□□ 0.64
UBBP4-202ENST00000584755 TOPAZ1Q8N9V7 1692 aa19.04■□□□□ 0.64
UBBP4-202ENST00000584755 CC2D1BQ5T0F9 858 aaKnown RBP19.03■□□□□ 0.64
UBBP4-202ENST00000584755 TERF2IPQ9NYB0 399 aa19.03■□□□□ 0.64
UBBP4-202ENST00000584755 NUDT16Q96DE0 195 aaKnown RBP19.02■□□□□ 0.63
UBBP4-202ENST00000584755 CABP1Q9NZU7 370 aa19.02■□□□□ 0.63
UBBP4-202ENST00000584755 PRR36Q9H6K5 1346 aa19.01■□□□□ 0.63
UBBP4-202ENST00000584755 CPSF1Q10570 1443 aaKnown RBP19.01■□□□□ 0.63
UBBP4-202ENST00000584755 PPIP5K1Q6PFW1 1433 aa19.01■□□□□ 0.63
UBBP4-202ENST00000584755 HSPA2P54652 639 aa19.01■□□□□ 0.63
UBBP4-202ENST00000584755 MRS2Q9HD23 443 aa19.01■□□□□ 0.63
UBBP4-202ENST00000584755 CCDC61Q9Y6R9 512 aa19.01■□□□□ 0.63
UBBP4-202ENST00000584755 STRCQ7RTU9 1775 aa19.01■□□□□ 0.63
UBBP4-202ENST00000584755 CDC42BPGQ6DT37 1551 aa19.01■□□□□ 0.63
UBBP4-202ENST00000584755 NSD2O96028 1365 aa19■□□□□ 0.63
UBBP4-202ENST00000584755 NKTRP30414 1462 aaKnown RBP19■□□□□ 0.63
UBBP4-202ENST00000584755 CNGB1Q14028 1251 aaPredicted RBP19■□□□□ 0.63
UBBP4-202ENST00000584755 NLRP13Q86W25 1043 aa19■□□□□ 0.63
UBBP4-202ENST00000584755 NALCNQ8IZF0 1738 aa18.99■□□□□ 0.63
UBBP4-202ENST00000584755 YTHDC1Q96MU7 727 aaKnown RBP18.99■□□□□ 0.63
UBBP4-202ENST00000584755 CGNL1Q0VF96 1302 aa18.99■□□□□ 0.63
UBBP4-202ENST00000584755 HDGFL2Q7Z4V5 671 aaPredicted RBP18.98■□□□□ 0.63
UBBP4-202ENST00000584755 FMN2Q9NZ56 1722 aa18.98■□□□□ 0.63
UBBP4-202ENST00000584755 ANKARQ7Z5J8 1434 aa18.98■□□□□ 0.63
UBBP4-202ENST00000584755 ADGRL3Q9HAR2 1447 aa18.97■□□□□ 0.63
UBBP4-202ENST00000584755 AKAP12Q02952 1782 aa18.97■□□□□ 0.63
UBBP4-202ENST00000584755 ITSN1Q15811 1721 aa18.96■□□□□ 0.63
UBBP4-202ENST00000584755 MON2Q7Z3U7 1717 aa18.96■□□□□ 0.63
UBBP4-202ENST00000584755 PLEKHG3A1L390 1219 aa18.96■□□□□ 0.63
UBBP4-202ENST00000584755 PPP2R1AP30153 589 aa18.95■□□□□ 0.62
UBBP4-202ENST00000584755 EDC4Q6P2E9 1401 aaKnown RBP18.94■□□□□ 0.62
UBBP4-202ENST00000584755 ANKRD26Q9UPS8 1709 aa18.94■□□□□ 0.62
UBBP4-202ENST00000584755 STRCP1A6NGW2 1772 aa18.93■□□□□ 0.62
UBBP4-202ENST00000584755 PNISRQ8TF01 805 aaKnown RBP18.93■□□□□ 0.62
UBBP4-202ENST00000584755 KIF20BQ96Q89 1820 aa18.91■□□□□ 0.62
UBBP4-202ENST00000584755 ZNF692Q9BU19 519 aaPredicted RBP18.91■□□□□ 0.62
UBBP4-202ENST00000584755 NCOA3Q9Y6Q9 1424 aa18.91■□□□□ 0.62
UBBP4-202ENST00000584755 NRKQ7Z2Y5 1582 aa18.91■□□□□ 0.62
UBBP4-202ENST00000584755 POLR3AO14802 1390 aaPredicted RBP18.9■□□□□ 0.62
UBBP4-202ENST00000584755 FYB1O15117 783 aa18.9■□□□□ 0.62
UBBP4-202ENST00000584755 CENPBP07199 599 aaPredicted RBP18.9■□□□□ 0.62
UBBP4-202ENST00000584755 MORC1Q86VD1 984 aa18.9■□□□□ 0.62
UBBP4-202ENST00000584755 RGPD8O14715 1765 aaPredicted RBP18.89■□□□□ 0.62
UBBP4-202ENST00000584755 PROSER2Q86WR7 435 aaPredicted RBP18.88■□□□□ 0.61
UBBP4-202ENST00000584755 ACEP12821 1306 aa18.87■□□□□ 0.61
UBBP4-202ENST00000584755 SSH2Q76I76 1423 aa18.87■□□□□ 0.61
UBBP4-202ENST00000584755 INSRP06213 1382 aa18.87■□□□□ 0.61
UBBP4-202ENST00000584755 USP6P35125 1406 aa18.86■□□□□ 0.61
UBBP4-202ENST00000584755 NUTM2FA1L443 756 aa18.86■□□□□ 0.61
UBBP4-202ENST00000584755 FAM9BQ8IZU0 186 aa18.86■□□□□ 0.61
UBBP4-202ENST00000584755 RBM33Q96EV2 1170 aaKnown RBP18.84■□□□□ 0.61
UBBP4-202ENST00000584755 DCCP43146 1447 aa18.84■□□□□ 0.61
UBBP4-202ENST00000584755 TMEM94Q12767 1356 aa18.84■□□□□ 0.61
UBBP4-202ENST00000584755 GGNBP2Q9H3C7 697 aa18.84■□□□□ 0.61
UBBP4-202ENST00000584755 C19orf44Q9H6X5 657 aa18.83■□□□□ 0.6
UBBP4-202ENST00000584755 TTC21BQ7Z4L5 1316 aa18.82■□□□□ 0.6
UBBP4-202ENST00000584755 SCAF1Q9H7N4 1312 aaKnown RBP18.82■□□□□ 0.6
UBBP4-202ENST00000584755 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.81■□□□□ 0.6
UBBP4-202ENST00000584755 DMRT2Q9Y5R5 561 aa18.8■□□□□ 0.6
UBBP4-202ENST00000584755 XIRP1Q702N8 1843 aaKnown RBP18.79■□□□□ 0.6
UBBP4-202ENST00000584755 C14orf37Q86TY3 774 aa18.79■□□□□ 0.6
UBBP4-202ENST00000584755 PMFBP1Q8TBY8 1022 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms