RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.65■■□□□ 1.7
RFFL-211ENST00000584541 C14orf37Q86TY3 774 aa25.63■■□□□ 1.69
RFFL-211ENST00000584541 NALCNQ8IZF0 1738 aa25.63■■□□□ 1.69
RFFL-211ENST00000584541 NCOA3Q9Y6Q9 1424 aa25.63■■□□□ 1.69
RFFL-211ENST00000584541 MINK1Q8N4C8 1332 aaPredicted RBP25.63■■□□□ 1.69
RFFL-211ENST00000584541 LRRC7Q96NW7 1537 aa25.62■■□□□ 1.69
RFFL-211ENST00000584541 ADGRB2O60241 1585 aa25.61■■□□□ 1.69
RFFL-211ENST00000584541 XIRP1Q702N8 1843 aaKnown RBP25.61■■□□□ 1.69
RFFL-211ENST00000584541 TESK2Q96S53 571 aa25.61■■□□□ 1.69
RFFL-211ENST00000584541 LTBP4Q8N2S1 1624 aa25.61■■□□□ 1.69
RFFL-211ENST00000584541 TMEM94Q12767 1356 aa25.6■■□□□ 1.69
RFFL-211ENST00000584541 TMF1P82094 1093 aa25.6■■□□□ 1.69
RFFL-211ENST00000584541 ADGRL3Q9HAR2 1447 aa25.59■■□□□ 1.69
RFFL-211ENST00000584541 RBM33Q96EV2 1170 aaKnown RBP25.58■■□□□ 1.69
RFFL-211ENST00000584541 EVC2Q86UK5 1308 aa25.58■■□□□ 1.69
RFFL-211ENST00000584541 CDCA8Q53HL2 280 aa25.55■■□□□ 1.68
RFFL-211ENST00000584541 CDC42BPGQ6DT37 1551 aa25.55■■□□□ 1.68
RFFL-211ENST00000584541 TULP4Q9NRJ4 1543 aa25.54■■□□□ 1.68
RFFL-211ENST00000584541 C19orf44Q9H6X5 657 aa25.53■■□□□ 1.68
RFFL-211ENST00000584541 MSH6P52701 1360 aa25.53■■□□□ 1.68
RFFL-211ENST00000584541 WASLO00401 505 aaPredicted RBP25.52■■□□□ 1.68
RFFL-211ENST00000584541 FMN2Q9NZ56 1722 aa25.51■■□□□ 1.68
RFFL-211ENST00000584541 ZNF316A6NFI3 1004 aaPredicted RBP25.51■■□□□ 1.67
RFFL-211ENST00000584541 SOCS7O14512 581 aa25.51■■□□□ 1.67
RFFL-211ENST00000584541 DISP3Q9P2K9 1392 aa25.51■■□□□ 1.67
RFFL-211ENST00000584541 DCCP43146 1447 aa25.5■■□□□ 1.67
RFFL-211ENST00000584541 SRPK2P78362 688 aaKnown RBP25.5■■□□□ 1.67
RFFL-211ENST00000584541 CDK19Q9BWU1 502 aa25.5■■□□□ 1.67
RFFL-211ENST00000584541 ATF3P18847 181 aa25.48■■□□□ 1.67
RFFL-211ENST00000584541 PUS7Q96PZ0 661 aaKnown RBP25.47■■□□□ 1.67
RFFL-211ENST00000584541 POLR3GLQ9BT43 218 aa25.46■■□□□ 1.67
RFFL-211ENST00000584541 ITSN1Q15811 1721 aa25.46■■□□□ 1.67
RFFL-211ENST00000584541 CADPS2Q86UW7 1296 aa25.45■■□□□ 1.66
RFFL-211ENST00000584541 CABP2Q9NPB3 220 aa25.45■■□□□ 1.66
RFFL-211ENST00000584541 C11orf95C9JLR9 678 aaPredicted RBP25.44■■□□□ 1.66
RFFL-211ENST00000584541 ILDR2Q71H61 639 aa25.44■■□□□ 1.66
RFFL-211ENST00000584541 RGPD8O14715 1765 aaPredicted RBP25.44■■□□□ 1.66
RFFL-211ENST00000584541 ATAD2Q6PL18 1390 aa25.44■■□□□ 1.66
RFFL-211ENST00000584541 KIF7Q2M1P5 1343 aa25.43■■□□□ 1.66
RFFL-211ENST00000584541 CCDC7Q96M83 1385 aa25.43■■□□□ 1.66
RFFL-211ENST00000584541 ANKARQ7Z5J8 1434 aa25.42■■□□□ 1.66
RFFL-211ENST00000584541 IQSEC2Q5JU85 1478 aa25.41■■□□□ 1.66
RFFL-211ENST00000584541 USP32Q8NFA0 1604 aa25.41■■□□□ 1.66
RFFL-211ENST00000584541 WASHC2AQ641Q2 1341 aa25.4■■□□□ 1.66
RFFL-211ENST00000584541 NUTM2FA1L443 756 aa25.4■■□□□ 1.66
RFFL-211ENST00000584541 NUDT16Q96DE0 195 aaKnown RBP25.4■■□□□ 1.66
RFFL-211ENST00000584541 ATP7BP35670 1465 aa25.4■■□□□ 1.66
RFFL-211ENST00000584541 TOPAZ1Q8N9V7 1692 aa25.39■■□□□ 1.65
RFFL-211ENST00000584541 CCDC61Q9Y6R9 512 aa25.37■■□□□ 1.65
RFFL-211ENST00000584541 MYOM1P52179 1685 aa25.36■■□□□ 1.65
RFFL-211ENST00000584541 NINLQ9Y2I6 1382 aa25.36■■□□□ 1.65
RFFL-211ENST00000584541 CERKQ8TCT0 537 aa25.36■■□□□ 1.65
RFFL-211ENST00000584541 MST1RQ04912 1400 aa25.36■■□□□ 1.65
RFFL-211ENST00000584541 PRR36Q9H6K5 1346 aa25.36■■□□□ 1.65
RFFL-211ENST00000584541 TMC1Q8TDI8 760 aa25.35■■□□□ 1.65
RFFL-211ENST00000584541 PPIP5K1Q6PFW1 1433 aa25.34■■□□□ 1.65
RFFL-211ENST00000584541 C1orf167Q5SNV9 1468 aa25.34■■□□□ 1.65
RFFL-211ENST00000584541 KIF1AQ12756 1690 aa25.32■■□□□ 1.64
RFFL-211ENST00000584541 SLAIN2Q9P270 581 aa25.31■■□□□ 1.64
RFFL-211ENST00000584541 ESCO1Q5FWF5 840 aa25.3■■□□□ 1.64
RFFL-211ENST00000584541 CABP1Q9NZU7 370 aa25.3■■□□□ 1.64
RFFL-211ENST00000584541 TOM1O60784 492 aa25.29■■□□□ 1.64
RFFL-211ENST00000584541 SLC12A5Q9H2X9 1139 aa25.28■■□□□ 1.64
RFFL-211ENST00000584541 AKAP12Q02952 1782 aa25.27■■□□□ 1.64
RFFL-211ENST00000584541 PLEKHG3A1L390 1219 aa25.27■■□□□ 1.64
RFFL-211ENST00000584541 TERF2IPQ9NYB0 399 aa25.27■■□□□ 1.64
RFFL-211ENST00000584541 PHF8Q9UPP1 1060 aa25.27■■□□□ 1.64
RFFL-211ENST00000584541 HDGFL2Q7Z4V5 671 aaPredicted RBP25.25■■□□□ 1.63
RFFL-211ENST00000584541 PMFBP1Q8TBY8 1022 aa25.25■■□□□ 1.63
RFFL-211ENST00000584541 ORAI2Q96SN7 254 aa25.25■■□□□ 1.63
RFFL-211ENST00000584541 NGDNQ8NEJ9 315 aaKnown RBP25.24■■□□□ 1.63
RFFL-211ENST00000584541 ANKRD36BQ8N2N9 1353 aa25.23■■□□□ 1.63
RFFL-211ENST00000584541 UBAP1LF5GYI3 381 aa25.23■■□□□ 1.63
RFFL-211ENST00000584541 DDX10Q13206 875 aaKnown RBP25.23■■□□□ 1.63
RFFL-211ENST00000584541 ACEP12821 1306 aa25.22■■□□□ 1.63
RFFL-211ENST00000584541 MON2Q7Z3U7 1717 aa25.22■■□□□ 1.63
RFFL-211ENST00000584541 ROBO1Q9Y6N7 1651 aa25.21■■□□□ 1.63
RFFL-211ENST00000584541 ZNF692Q9BU19 519 aaPredicted RBP25.21■■□□□ 1.63
RFFL-211ENST00000584541 PANK3Q9H999 370 aa25.21■■□□□ 1.63
RFFL-211ENST00000584541 POLR3AO14802 1390 aaPredicted RBP25.2■■□□□ 1.63
RFFL-211ENST00000584541 CD163L1Q9NR16 1453 aa25.2■■□□□ 1.62
RFFL-211ENST00000584541 A0A1W2PP64 1363 aa25.19■■□□□ 1.62
RFFL-211ENST00000584541 BRINP3Q76B58 766 aa25.19■■□□□ 1.62
RFFL-211ENST00000584541 CPSF1Q10570 1443 aaKnown RBP25.19■■□□□ 1.62
RFFL-211ENST00000584541 KTN1Q86UP2 1357 aaKnown RBP25.18■■□□□ 1.62
RFFL-211ENST00000584541 PSME1Q06323 249 aa25.16■■□□□ 1.62
RFFL-211ENST00000584541 NPHP3Q7Z494 1330 aa25.15■■□□□ 1.62
RFFL-211ENST00000584541 SCAF1Q9H7N4 1312 aaKnown RBP25.15■■□□□ 1.62
RFFL-211ENST00000584541 FOXO3O43524 673 aa25.15■■□□□ 1.62
RFFL-211ENST00000584541 PIP4K2BP78356 416 aa25.15■■□□□ 1.62
RFFL-211ENST00000584541 NHSL1Q5SYE7 1610 aa25.15■■□□□ 1.62
RFFL-211ENST00000584541 USP6P35125 1406 aa25.14■■□□□ 1.62
RFFL-211ENST00000584541 BRD4O60885 1362 aaPredicted RBP25.13■■□□□ 1.61
RFFL-211ENST00000584541 EDC4Q6P2E9 1401 aaKnown RBP25.12■■□□□ 1.61
RFFL-211ENST00000584541 NSD3Q9BZ95 1437 aa25.12■■□□□ 1.61
RFFL-211ENST00000584541 KNSTRNQ9Y448 316 aa25.12■■□□□ 1.61
RFFL-211ENST00000584541 NRKQ7Z2Y5 1582 aa25.12■■□□□ 1.61
RFFL-211ENST00000584541 KIF20BQ96Q89 1820 aa25.1■■□□□ 1.61
RFFL-211ENST00000584541 KRT28Q7Z3Y7 464 aa25.1■■□□□ 1.61
RFFL-211ENST00000584541 CARD14Q9BXL6 1004 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms