RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-223ENST00000584472 ADGRB1O14514 1584 aa22.98■■□□□ 1.27
CSNK1D-223ENST00000584472 L3MBTL2Q969R5 705 aa22.98■■□□□ 1.27
CSNK1D-223ENST00000584472 TMEM132EQ6IEE7 984 aa22.97■■□□□ 1.27
CSNK1D-223ENST00000584472 TIMELESSQ9UNS1 1208 aa22.97■■□□□ 1.27
CSNK1D-223ENST00000584472 NALCNQ8IZF0 1738 aa22.96■■□□□ 1.27
CSNK1D-223ENST00000584472 KIAA1210Q9ULL0 1709 aa22.96■■□□□ 1.27
CSNK1D-223ENST00000584472 BRINP3Q76B58 766 aa22.95■■□□□ 1.26
CSNK1D-223ENST00000584472 SPATA31A6Q5VVP1 1343 aa22.94■■□□□ 1.26
CSNK1D-223ENST00000584472 STK26Q9P289 416 aa22.93■■□□□ 1.26
CSNK1D-223ENST00000584472 SHPRHQ149N8 1683 aa22.93■■□□□ 1.26
CSNK1D-223ENST00000584472 SIRT1Q96EB6 747 aa22.92■■□□□ 1.26
CSNK1D-223ENST00000584472 DLC1Q96QB1 1528 aa22.92■■□□□ 1.26
CSNK1D-223ENST00000584472 NHSL1Q5SYE7 1610 aa22.91■■□□□ 1.26
CSNK1D-223ENST00000584472 RGS17Q9UGC6 210 aaPredicted RBP22.89■■□□□ 1.25
CSNK1D-223ENST00000584472 CDC42BPGQ6DT37 1551 aa22.88■■□□□ 1.25
CSNK1D-223ENST00000584472 C1orf167Q5SNV9 1468 aa22.86■■□□□ 1.25
CSNK1D-223ENST00000584472 WAPLQ7Z5K2 1190 aa22.84■■□□□ 1.25
CSNK1D-223ENST00000584472 PLEKHH1Q9ULM0 1364 aa22.84■■□□□ 1.25
CSNK1D-223ENST00000584472 TRPM1Q7Z4N2 1603 aa22.83■■□□□ 1.25
CSNK1D-223ENST00000584472 LRRC59Q96AG4 307 aaKnown RBP22.82■■□□□ 1.24
CSNK1D-223ENST00000584472 ARHGEF28Q8N1W1 1705 aaKnown RBP22.82■■□□□ 1.24
CSNK1D-223ENST00000584472 PRAM1Q96QH2 718 aa22.81■■□□□ 1.24
CSNK1D-223ENST00000584472 LRP6O75581 1613 aa22.8■■□□□ 1.24
CSNK1D-223ENST00000584472 TRAK1Q9UPV9 953 aa22.8■■□□□ 1.24
CSNK1D-223ENST00000584472 ZEB1P37275 1124 aaPredicted RBP22.79■■□□□ 1.24
CSNK1D-223ENST00000584472 NBPF8Q3BBV2 869 aa22.79■■□□□ 1.24
CSNK1D-223ENST00000584472 ADGRB2O60241 1585 aa22.79■■□□□ 1.24
CSNK1D-223ENST00000584472 NBPF1Q3BBV0 1214 aa22.78■■□□□ 1.24
CSNK1D-223ENST00000584472 POGKQ9P215 609 aa22.78■■□□□ 1.24
CSNK1D-223ENST00000584472 FMN2Q9NZ56 1722 aa22.77■■□□□ 1.23
CSNK1D-223ENST00000584472 SOS2Q07890 1332 aaPredicted RBP22.76■■□□□ 1.23
CSNK1D-223ENST00000584472 POTEAQ6S8J7 498 aa22.74■■□□□ 1.23
CSNK1D-223ENST00000584472 ZNF772Q68DY9 489 aaPredicted RBP22.73■■□□□ 1.23
CSNK1D-223ENST00000584472 ROCK2O75116 1388 aaKnown RBP22.73■■□□□ 1.23
CSNK1D-223ENST00000584472 GPRASP1Q5JY77 1395 aa22.73■■□□□ 1.23
CSNK1D-223ENST00000584472 PNPLA6Q8IY17 1366 aa22.73■■□□□ 1.23
CSNK1D-223ENST00000584472 SAFB2Q14151 953 aaKnown RBP eCLIP22.72■■□□□ 1.231e-12■■■■■ 37.9
CSNK1D-223ENST00000584472 RALGAPBQ86X10 1494 aa22.72■■□□□ 1.23
CSNK1D-223ENST00000584472 MEX3CQ5U5Q3 659 aaKnown RBP22.7■■□□□ 1.22
CSNK1D-223ENST00000584472 ORAI2Q96SN7 254 aa22.7■■□□□ 1.22
CSNK1D-223ENST00000584472 NPHP3Q7Z494 1330 aa22.7■■□□□ 1.22
CSNK1D-223ENST00000584472 EIF3AQ14152 1382 aaKnown RBP22.68■■□□□ 1.22
CSNK1D-223ENST00000584472 COL22A1Q8NFW1 1626 aaPredicted RBP22.68■■□□□ 1.22
CSNK1D-223ENST00000584472 ANKARQ7Z5J8 1434 aa22.66■■□□□ 1.22
CSNK1D-223ENST00000584472 MINK1Q8N4C8 1332 aaPredicted RBP22.66■■□□□ 1.22
CSNK1D-223ENST00000584472 KIF1AQ12756 1690 aa22.65■■□□□ 1.22
CSNK1D-223ENST00000584472 DDX17Q92841 729 aaKnown RBP22.65■■□□□ 1.22
CSNK1D-223ENST00000584472 PXDNQ92626 1479 aa22.65■■□□□ 1.22
CSNK1D-223ENST00000584472 QRICH2Q9H0J4 1663 aa22.65■■□□□ 1.22
CSNK1D-223ENST00000584472 CENPJQ9HC77 1338 aaPredicted RBP22.64■■□□□ 1.22
CSNK1D-223ENST00000584472 TULP4Q9NRJ4 1543 aa22.64■■□□□ 1.21
CSNK1D-223ENST00000584472 ESCO1Q5FWF5 840 aa22.64■■□□□ 1.21
CSNK1D-223ENST00000584472 CDK12Q9NYV4 1490 aaPredicted RBP22.64■■□□□ 1.21
CSNK1D-223ENST00000584472 WASLO00401 505 aaPredicted RBP22.63■■□□□ 1.21
CSNK1D-223ENST00000584472 HIRIP3Q9BW71 556 aaPredicted RBP22.63■■□□□ 1.21
CSNK1D-223ENST00000584472 USP32Q8NFA0 1604 aa22.63■■□□□ 1.21
CSNK1D-223ENST00000584472 RGPD8O14715 1765 aaPredicted RBP22.62■■□□□ 1.21
CSNK1D-223ENST00000584472 NUTM2FA1L443 756 aa22.61■■□□□ 1.21
CSNK1D-223ENST00000584472 NUTM2BA6NNL0 878 aaPredicted RBP22.6■■□□□ 1.21
CSNK1D-223ENST00000584472 NUTM2EB1AL46 878 aaPredicted RBP22.6■■□□□ 1.21
CSNK1D-223ENST00000584472 NUTM2AQ8IVF1 878 aaPredicted RBP22.6■■□□□ 1.21
CSNK1D-223ENST00000584472 CARD11Q9BXL7 1154 aa22.6■■□□□ 1.21
CSNK1D-223ENST00000584472 AFF2P51816 1311 aa22.57■■□□□ 1.2
CSNK1D-223ENST00000584472 ITSN1Q15811 1721 aa22.57■■□□□ 1.2
CSNK1D-223ENST00000584472 ATP7BP35670 1465 aa22.56■■□□□ 1.2
CSNK1D-223ENST00000584472 FOXO3O43524 673 aa22.56■■□□□ 1.2
CSNK1D-223ENST00000584472 SBNO2Q9Y2G9 1366 aa22.55■■□□□ 1.2
CSNK1D-223ENST00000584472 PHF8Q9UPP1 1060 aa22.55■■□□□ 1.2
CSNK1D-223ENST00000584472 PRR36Q9H6K5 1346 aa22.55■■□□□ 1.2
CSNK1D-223ENST00000584472 RXRBP28702 533 aa22.54■■□□□ 1.2
CSNK1D-223ENST00000584472 CDK19Q9BWU1 502 aa22.54■■□□□ 1.2
CSNK1D-223ENST00000584472 TOPAZ1Q8N9V7 1692 aa22.53■■□□□ 1.2
CSNK1D-223ENST00000584472 FNBP4Q8N3X1 1017 aaPredicted RBP22.52■■□□□ 1.2
CSNK1D-223ENST00000584472 C8orf37Q96NL8 207 aa22.52■■□□□ 1.2
CSNK1D-223ENST00000584472 NUDT16Q96DE0 195 aaKnown RBP22.51■■□□□ 1.19
CSNK1D-223ENST00000584472 SPATA31A3Q5VYP0 1347 aa22.51■■□□□ 1.19
CSNK1D-223ENST00000584472 SBNO1A3KN83 1393 aa22.5■■□□□ 1.19
CSNK1D-223ENST00000584472 USP47Q96K76 1375 aa22.5■■□□□ 1.19
CSNK1D-223ENST00000584472 RBM6P78332 1123 aaKnown RBP22.49■■□□□ 1.19
CSNK1D-223ENST00000584472 NGLY1Q96IV0 654 aa22.49■■□□□ 1.19
CSNK1D-223ENST00000584472 EVC2Q86UK5 1308 aa22.49■■□□□ 1.19
CSNK1D-223ENST00000584472 MARF1Q9Y4F3 1742 aaKnown RBP22.48■■□□□ 1.19
CSNK1D-223ENST00000584472 PSME1Q06323 249 aa22.48■■□□□ 1.19
CSNK1D-223ENST00000584472 CCDC61Q9Y6R9 512 aa22.48■■□□□ 1.19
CSNK1D-223ENST00000584472 ADAMTS2O95450 1211 aa22.47■■□□□ 1.19
CSNK1D-223ENST00000584472 SRPK2P78362 688 aaKnown RBP22.47■■□□□ 1.19
CSNK1D-223ENST00000584472 TNS3Q68CZ2 1445 aa22.47■■□□□ 1.19
CSNK1D-223ENST00000584472 KRT28Q7Z3Y7 464 aa22.46■■□□□ 1.19
CSNK1D-223ENST00000584472 PMFBP1Q8TBY8 1022 aa22.46■■□□□ 1.19
CSNK1D-223ENST00000584472 QTRT2Q9H974 415 aaKnown RBP22.46■■□□□ 1.19
CSNK1D-223ENST00000584472 EIF4G2P78344 907 aaKnown RBP eCLIP22.45■■□□□ 1.18
CSNK1D-223ENST00000584472 XPCQ01831 940 aaPredicted RBP22.45■■□□□ 1.18
CSNK1D-223ENST00000584472 ARHGEF10O15013 1369 aa22.45■■□□□ 1.18
CSNK1D-223ENST00000584472 TRPC5Q9UL62 973 aaPredicted RBP22.44■■□□□ 1.18
CSNK1D-223ENST00000584472 POLR3AO14802 1390 aaPredicted RBP22.43■■□□□ 1.18
CSNK1D-223ENST00000584472 PLEKHG3A1L390 1219 aa22.43■■□□□ 1.18
CSNK1D-223ENST00000584472 CABP2Q9NPB3 220 aa22.43■■□□□ 1.18
CSNK1D-223ENST00000584472 USP21Q9UK80 565 aa22.43■■□□□ 1.18
CSNK1D-223ENST00000584472 TRPM3Q9HCF6 1732 aaPredicted RBP22.43■■□□□ 1.18
CSNK1D-223ENST00000584472 ATRNO75882 1429 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms