RNA–Protein interactions for RNA: ENST00000584250.1

TTC39C-209, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 1 (best) BASIC

Gene TTC39C, Length 1,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-209ENST00000584250 PRAM1Q96QH2 718 aa35.98■■■■□ 3.35
TTC39C-209ENST00000584250 C1orf167Q5SNV9 1468 aa35.98■■■■□ 3.35
TTC39C-209ENST00000584250 CDC42BPGQ6DT37 1551 aa35.96■■■■□ 3.35
TTC39C-209ENST00000584250 DLC1Q96QB1 1528 aa35.95■■■■□ 3.35
TTC39C-209ENST00000584250 NBPF1Q3BBV0 1214 aa35.95■■■■□ 3.35
TTC39C-209ENST00000584250 COL16A1Q07092 1604 aaPredicted RBP35.94■■■■□ 3.34
TTC39C-209ENST00000584250 DDX17Q92841 729 aaKnown RBP35.93■■■■□ 3.34
TTC39C-209ENST00000584250 ORAI2Q96SN7 254 aa35.92■■■■□ 3.34
TTC39C-209ENST00000584250 AHDC1Q5TGY3 1603 aaPredicted RBP35.92■■■■□ 3.34
TTC39C-209ENST00000584250 NUTM2FA1L443 756 aa35.91■■■■□ 3.34
TTC39C-209ENST00000584250 KIAA1210Q9ULL0 1709 aa35.91■■■■□ 3.34
TTC39C-209ENST00000584250 POGKQ9P215 609 aa35.88■■■■□ 3.33
TTC39C-209ENST00000584250 MED1Q15648 1581 aaPredicted RBP35.88■■■■□ 3.33
TTC39C-209ENST00000584250 DISP3Q9P2K9 1392 aa35.88■■■■□ 3.33
TTC39C-209ENST00000584250 NHSL1Q5SYE7 1610 aa35.86■■■■□ 3.33
TTC39C-209ENST00000584250 ARHGEF28Q8N1W1 1705 aaKnown RBP35.85■■■■□ 3.33
TTC39C-209ENST00000584250 FMN2Q9NZ56 1722 aa35.85■■■■□ 3.33
TTC39C-209ENST00000584250 HIRIP3Q9BW71 556 aaPredicted RBP35.81■■■■□ 3.32
TTC39C-209ENST00000584250 MINK1Q8N4C8 1332 aaPredicted RBP35.81■■■■□ 3.32
TTC39C-209ENST00000584250 NBPF8Q3BBV2 869 aa35.8■■■■□ 3.32
TTC39C-209ENST00000584250 ESCO1Q5FWF5 840 aa35.78■■■■□ 3.32
TTC39C-209ENST00000584250 TRPM1Q7Z4N2 1603 aa35.78■■■■□ 3.32
TTC39C-209ENST00000584250 RGPD8O14715 1765 aaPredicted RBP35.76■■■■□ 3.32
TTC39C-209ENST00000584250 JCADQ9P266 1359 aa35.76■■■■□ 3.31
TTC39C-209ENST00000584250 ADGRB2O60241 1585 aa35.75■■■■□ 3.31
TTC39C-209ENST00000584250 TONSLQ96HA7 1378 aa35.74■■■■□ 3.31
TTC39C-209ENST00000584250 USP32Q8NFA0 1604 aa35.71■■■■□ 3.31
TTC39C-209ENST00000584250 FOXO3O43524 673 aa35.68■■■■□ 3.3
TTC39C-209ENST00000584250 SOS2Q07890 1332 aaPredicted RBP35.67■■■■□ 3.3
TTC39C-209ENST00000584250 XPCQ01831 940 aaPredicted RBP35.67■■■■□ 3.3
TTC39C-209ENST00000584250 SHPRHQ149N8 1683 aa35.67■■■■□ 3.3
TTC39C-209ENST00000584250 PRR36Q9H6K5 1346 aa35.65■■■■□ 3.3
TTC39C-209ENST00000584250 WASLO00401 505 aaPredicted RBP35.64■■■■□ 3.3
TTC39C-209ENST00000584250 LRP6O75581 1613 aa35.64■■■■□ 3.3
TTC39C-209ENST00000584250 ROCK2O75116 1388 aaKnown RBP35.64■■■■□ 3.3
TTC39C-209ENST00000584250 ILDR2Q71H61 639 aa35.63■■■■□ 3.29
TTC39C-209ENST00000584250 LRRC59Q96AG4 307 aaKnown RBP35.63■■■■□ 3.29
TTC39C-209ENST00000584250 PXDNQ92626 1479 aa35.61■■■■□ 3.29
TTC39C-209ENST00000584250 PHF8Q9UPP1 1060 aa35.6■■■■□ 3.29
TTC39C-209ENST00000584250 PNPLA6Q8IY17 1366 aa35.6■■■■□ 3.29
TTC39C-209ENST00000584250 NPHP3Q7Z494 1330 aa35.59■■■■□ 3.29
TTC39C-209ENST00000584250 ANKARQ7Z5J8 1434 aa35.59■■■■□ 3.29
TTC39C-209ENST00000584250 TULP4Q9NRJ4 1543 aa35.58■■■■□ 3.29
TTC39C-209ENST00000584250 KIF1AQ12756 1690 aa35.58■■■■□ 3.29
TTC39C-209ENST00000584250 CENPJQ9HC77 1338 aaPredicted RBP35.57■■■■□ 3.29
TTC39C-209ENST00000584250 SPATA31A6Q5VVP1 1343 aa35.57■■■■□ 3.28
TTC39C-209ENST00000584250 PMFBP1Q8TBY8 1022 aa35.56■■■■□ 3.28
TTC39C-209ENST00000584250 PHF23Q9BUL5 403 aaPredicted RBP35.56■■■■□ 3.28
TTC39C-209ENST00000584250 RGS17Q9UGC6 210 aaPredicted RBP35.56■■■■□ 3.28
TTC39C-209ENST00000584250 GPRASP1Q5JY77 1395 aa35.55■■■■□ 3.28
TTC39C-209ENST00000584250 NUTM2BA6NNL0 878 aaPredicted RBP35.55■■■■□ 3.28
TTC39C-209ENST00000584250 NUTM2EB1AL46 878 aaPredicted RBP35.55■■■■□ 3.28
TTC39C-209ENST00000584250 NUTM2AQ8IVF1 878 aaPredicted RBP35.55■■■■□ 3.28
TTC39C-209ENST00000584250 CDK19Q9BWU1 502 aa35.55■■■■□ 3.28
TTC39C-209ENST00000584250 QRICH2Q9H0J4 1663 aa35.55■■■■□ 3.28
TTC39C-209ENST00000584250 RALGAPBQ86X10 1494 aa35.53■■■■□ 3.28
TTC39C-209ENST00000584250 ATP7BP35670 1465 aa35.51■■■■□ 3.28
TTC39C-209ENST00000584250 KRT28Q7Z3Y7 464 aa35.5■■■■□ 3.27
TTC39C-209ENST00000584250 NUDT16Q96DE0 195 aaKnown RBP35.49■■■■□ 3.27
TTC39C-209ENST00000584250 EIF3AQ14152 1382 aaKnown RBP35.49■■■■□ 3.27
TTC39C-209ENST00000584250 CARD11Q9BXL7 1154 aa35.47■■■■□ 3.27
TTC39C-209ENST00000584250 CLSPNQ9HAW4 1339 aa35.47■■■■□ 3.27
TTC39C-209ENST00000584250 CCER1Q8TC90 406 aaPredicted RBP35.46■■■■□ 3.27
TTC39C-209ENST00000584250 SPATA31A3Q5VYP0 1347 aa35.42■■■■□ 3.26
TTC39C-209ENST00000584250 CABP2Q9NPB3 220 aa35.42■■■■□ 3.26
TTC39C-209ENST00000584250 MEX3CQ5U5Q3 659 aaKnown RBP35.41■■■■□ 3.26
TTC39C-209ENST00000584250 COL22A1Q8NFW1 1626 aaPredicted RBP35.41■■■■□ 3.26
TTC39C-209ENST00000584250 TOPAZ1Q8N9V7 1692 aa35.4■■■■□ 3.26
TTC39C-209ENST00000584250 PSME1Q06323 249 aa35.4■■■■□ 3.26
TTC39C-209ENST00000584250 ITSN1Q15811 1721 aa35.39■■■■□ 3.26
TTC39C-209ENST00000584250 SRPK2P78362 688 aaKnown RBP35.38■■■■□ 3.25
TTC39C-209ENST00000584250 POTEAQ6S8J7 498 aa35.38■■■■□ 3.25
TTC39C-209ENST00000584250 ADAMTS2O95450 1211 aa35.36■■■■□ 3.25
TTC39C-209ENST00000584250 TRPM3Q9HCF6 1732 aaPredicted RBP35.36■■■■□ 3.25
TTC39C-209ENST00000584250 TNS3Q68CZ2 1445 aa35.35■■■■□ 3.25
TTC39C-209ENST00000584250 NGDNQ8NEJ9 315 aaKnown RBP35.35■■■■□ 3.25
TTC39C-209ENST00000584250 CCDC61Q9Y6R9 512 aa35.35■■■■□ 3.25
TTC39C-209ENST00000584250 SBNO1A3KN83 1393 aa35.33■■■■□ 3.25
TTC39C-209ENST00000584250 PLEKHG5O94827 1062 aa35.31■■■■□ 3.24
TTC39C-209ENST00000584250 LMOD2Q6P5Q4 547 aa35.3■■■■□ 3.24
TTC39C-209ENST00000584250 C8orf37Q96NL8 207 aa35.3■■■■□ 3.24
TTC39C-209ENST00000584250 ACEP12821 1306 aa35.3■■■■□ 3.24
TTC39C-209ENST00000584250 EVC2Q86UK5 1308 aa35.3■■■■□ 3.24
TTC39C-209ENST00000584250 PLEKHG3A1L390 1219 aa35.29■■■■□ 3.24
TTC39C-209ENST00000584250 TIMELESSQ9UNS1 1208 aa35.29■■■■□ 3.24
TTC39C-209ENST00000584250 CABLES1Q8TDN4 633 aa35.28■■■■□ 3.24
TTC39C-209ENST00000584250 PPIP5K1Q6PFW1 1433 aa35.28■■■■□ 3.24
TTC39C-209ENST00000584250 POLR3AO14802 1390 aaPredicted RBP35.27■■■■□ 3.24
TTC39C-209ENST00000584250 AFF2P51816 1311 aa35.27■■■■□ 3.24
TTC39C-209ENST00000584250 ALS2Q96Q42 1657 aa35.26■■■■□ 3.23
TTC39C-209ENST00000584250 SBNO2Q9Y2G9 1366 aa35.24■■■■□ 3.23
TTC39C-209ENST00000584250 CABP1Q9NZU7 370 aa35.23■■■■□ 3.23
TTC39C-209ENST00000584250 ST20-MTHFSA0A0A6YYL1 179 aa35.21■■■■□ 3.23
TTC39C-209ENST00000584250 PAK3O75914 559 aaPredicted RBP35.21■■■■□ 3.23
TTC39C-209ENST00000584250 NGLY1Q96IV0 654 aa35.2■■■■□ 3.23
TTC39C-209ENST00000584250 ARHGEF10O15013 1369 aa35.2■■■■□ 3.23
TTC39C-209ENST00000584250 ABCA3Q99758 1704 aa35.2■■■■□ 3.23
TTC39C-209ENST00000584250 MARF1Q9Y4F3 1742 aaKnown RBP35.19■■■■□ 3.22
TTC39C-209ENST00000584250 TESK2Q96S53 571 aa35.18■■■■□ 3.22
TTC39C-209ENST00000584250 ZNF772Q68DY9 489 aaPredicted RBP35.16■■■■□ 3.22
Retrieved 100 of 20,778 RNA–protein pairs in 233.8 ms