RNA–Protein interactions for RNA: ENST00000583948.5

NUP85-224, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 1,197 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-224ENST00000583948 COL22A1Q8NFW1 1626 aaPredicted RBP17.72■□□□□ 0.43
NUP85-224ENST00000583948 RALGAPBQ86X10 1494 aa17.72■□□□□ 0.43
NUP85-224ENST00000583948 ROBO2Q9HCK4 1378 aa17.72■□□□□ 0.43
NUP85-224ENST00000583948 NUTM2FA1L443 756 aa17.72■□□□□ 0.43
NUP85-224ENST00000583948 HRCP23327 699 aa17.7■□□□□ 0.42
NUP85-224ENST00000583948 FOXO3O43524 673 aa17.69■□□□□ 0.42
NUP85-224ENST00000583948 ESCO1Q5FWF5 840 aa17.68■□□□□ 0.42
NUP85-224ENST00000583948 SEPT12Q8IYM1 358 aa17.68■□□□□ 0.42
NUP85-224ENST00000583948 IQGAP3Q86VI3 1631 aa17.67■□□□□ 0.42
NUP85-224ENST00000583948 NUP155O75694 1391 aa17.66■□□□□ 0.42
NUP85-224ENST00000583948 FAM182BQ5T319 152 aa17.66■□□□□ 0.42
NUP85-224ENST00000583948 PXDNQ92626 1479 aa17.66■□□□□ 0.42
NUP85-224ENST00000583948 UNC5CLQ8IV45 518 aa17.65■□□□□ 0.42
NUP85-224ENST00000583948 NEXMIFQ5QGS0 1516 aa17.65■□□□□ 0.42
NUP85-224ENST00000583948 SF3B2Q13435 895 aaKnown RBP17.64■□□□□ 0.41
NUP85-224ENST00000583948 APLP2Q06481 763 aa17.63■□□□□ 0.41
NUP85-224ENST00000583948 CABLES1Q8TDN4 633 aa17.63■□□□□ 0.41
NUP85-224ENST00000583948 SPHKAPQ2M3C7 1700 aa17.62■□□□□ 0.41
NUP85-224ENST00000583948 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.62■□□□□ 0.41
NUP85-224ENST00000583948 EN1Q05925 392 aaPredicted RBP17.62■□□□□ 0.41
NUP85-224ENST00000583948 R3HDM1Q15032 1099 aaKnown RBP17.62■□□□□ 0.41
NUP85-224ENST00000583948 SLIT2O94813 1529 aa17.62■□□□□ 0.41
NUP85-224ENST00000583948 CLTCL1P53675 1640 aa17.61■□□□□ 0.41
NUP85-224ENST00000583948 ITGAEP38570 1179 aa17.61■□□□□ 0.41
NUP85-224ENST00000583948 CCDC9Q9Y3X0 531 aaKnown RBP17.6■□□□□ 0.41
NUP85-224ENST00000583948 NPHP3Q7Z494 1330 aa17.58■□□□□ 0.4
NUP85-224ENST00000583948 KRT27Q7Z3Y8 459 aa17.58■□□□□ 0.4
NUP85-224ENST00000583948 A0A0G2JS52 829 aa17.57■□□□□ 0.4
NUP85-224ENST00000583948 MYT1Q01538 1121 aa17.57■□□□□ 0.4
NUP85-224ENST00000583948 WAPLQ7Z5K2 1190 aa17.56■□□□□ 0.4
NUP85-224ENST00000583948 YY1P25490 414 aa17.55■□□□□ 0.4
NUP85-224ENST00000583948 PLCH1Q4KWH8 1693 aa17.55■□□□□ 0.4
NUP85-224ENST00000583948 USP32Q8NFA0 1604 aa17.54■□□□□ 0.4
NUP85-224ENST00000583948 STK26Q9P289 416 aa17.54■□□□□ 0.4
NUP85-224ENST00000583948 SPATA31A3Q5VYP0 1347 aa17.53■□□□□ 0.4
NUP85-224ENST00000583948 BAG6P46379 1132 aa17.53■□□□□ 0.4
NUP85-224ENST00000583948 VPS72Q15906 364 aa17.53■□□□□ 0.4
NUP85-224ENST00000583948 FAM98CQ17RN3 349 aaKnown RBP17.53■□□□□ 0.4
NUP85-224ENST00000583948 EZH2Q15910 746 aaKnown RBP17.52■□□□□ 0.4
NUP85-224ENST00000583948 PLEKHH1Q9ULM0 1364 aa17.52■□□□□ 0.39
NUP85-224ENST00000583948 NAIPQ13075 1403 aa17.51■□□□□ 0.39
NUP85-224ENST00000583948 KIF1BO60333 1816 aa17.5■□□□□ 0.39
NUP85-224ENST00000583948 ONECUT3O60422 494 aaPredicted RBP17.5■□□□□ 0.39
NUP85-224ENST00000583948 HAP1P54257 671 aaPredicted RBP17.5■□□□□ 0.39
NUP85-224ENST00000583948 KRT28Q7Z3Y7 464 aa17.5■□□□□ 0.39
NUP85-224ENST00000583948 RGPD8O14715 1765 aaPredicted RBP17.5■□□□□ 0.39
NUP85-224ENST00000583948 CDC42BPGQ6DT37 1551 aa17.49■□□□□ 0.39
NUP85-224ENST00000583948 FAM83GA6ND36 823 aa17.49■□□□□ 0.39
NUP85-224ENST00000583948 LMOD2Q6P5Q4 547 aa17.48■□□□□ 0.39
NUP85-224ENST00000583948 HFM1A2PYH4 1435 aa17.47■□□□□ 0.39
NUP85-224ENST00000583948 PPARGC1BQ86YN6 1023 aaKnown RBP17.46■□□□□ 0.39
NUP85-224ENST00000583948 ABCA3Q99758 1704 aa17.46■□□□□ 0.39
NUP85-224ENST00000583948 ROCK1Q13464 1354 aa17.45■□□□□ 0.38
NUP85-224ENST00000583948 TNS1Q9HBL0 1735 aaKnown RBP17.45■□□□□ 0.38
NUP85-224ENST00000583948 TMEM132EQ6IEE7 984 aa17.45■□□□□ 0.38
NUP85-224ENST00000583948 VGFO15240 615 aaPredicted RBP17.43■□□□□ 0.38
NUP85-224ENST00000583948 RGPD1P0DJD0 1748 aa17.43■□□□□ 0.38
NUP85-224ENST00000583948 NWD2Q9ULI1 1742 aa17.43■□□□□ 0.38
NUP85-224ENST00000583948 NRAPQ86VF7 1730 aa17.42■□□□□ 0.38
NUP85-224ENST00000583948 FMN2Q9NZ56 1722 aa17.42■□□□□ 0.38
NUP85-224ENST00000583948 PPLO60437 1756 aa17.42■□□□□ 0.38
NUP85-224ENST00000583948 ADGRF5Q8IZF2 1346 aa17.42■□□□□ 0.38
NUP85-224ENST00000583948 CAMTA1Q9Y6Y1 1673 aa17.42■□□□□ 0.38
NUP85-224ENST00000583948 LRPPRCP42704 1394 aaKnown RBP17.41■□□□□ 0.38
NUP85-224ENST00000583948 PRAG1Q86YV5 1406 aa17.41■□□□□ 0.38
NUP85-224ENST00000583948 TRIM37O94972 964 aa17.41■□□□□ 0.38
NUP85-224ENST00000583948 BTG4Q9NY30 223 aa17.41■□□□□ 0.38
NUP85-224ENST00000583948 TNS3Q68CZ2 1445 aa17.4■□□□□ 0.38
NUP85-224ENST00000583948 CAMKK2Q96RR4 588 aa17.4■□□□□ 0.38
NUP85-224ENST00000583948 PMFBP1Q8TBY8 1022 aa17.38■□□□□ 0.37
NUP85-224ENST00000583948 CCDC144AA2RUR9 1427 aa17.38■□□□□ 0.37
NUP85-224ENST00000583948 PHF8Q9UPP1 1060 aa17.37■□□□□ 0.37
NUP85-224ENST00000583948 SAFB2Q14151 953 aaKnown RBP eCLIP17.36■□□□□ 0.37
NUP85-224ENST00000583948 KIF1AQ12756 1690 aa17.36■□□□□ 0.37
NUP85-224ENST00000583948 APBA3O96018 575 aa17.35■□□□□ 0.37
NUP85-224ENST00000583948 RGL3Q3MIN7 710 aa17.34■□□□□ 0.37
NUP85-224ENST00000583948 IFT172Q9UG01 1749 aa17.34■□□□□ 0.37
NUP85-224ENST00000583948 PSME1Q06323 249 aa17.33■□□□□ 0.36
NUP85-224ENST00000583948 THSD7AQ9UPZ6 1657 aa17.32■□□□□ 0.36
NUP85-224ENST00000583948 SPATA31A5Q5VU36 1347 aa17.32■□□□□ 0.36
NUP85-224ENST00000583948 SPATA31A7Q8IWB4 1347 aa17.32■□□□□ 0.36
NUP85-224ENST00000583948 NUP188Q5SRE5 1749 aa17.32■□□□□ 0.36
NUP85-224ENST00000583948 UTRNP46939 3433 aa17.31■□□□□ 0.36
NUP85-224ENST00000583948 DISP2A7MBM2 1401 aa17.31■□□□□ 0.36
NUP85-224ENST00000583948 PPP1R1BQ9UD71 204 aaPredicted RBP17.3■□□□□ 0.36
NUP85-224ENST00000583948 TECPR2O15040 1411 aa17.3■□□□□ 0.36
NUP85-224ENST00000583948 RPGRIP1LQ68CZ1 1315 aa17.29■□□□□ 0.36
NUP85-224ENST00000583948 CHRNA2Q15822 529 aa17.29■□□□□ 0.36
NUP85-224ENST00000583948 PDGFDQ9GZP0 370 aaPredicted RBP17.29■□□□□ 0.36
NUP85-224ENST00000583948 NRXN1Q9ULB1 1477 aa17.29■□□□□ 0.36
NUP85-224ENST00000583948 RREB1Q92766 1687 aa17.29■□□□□ 0.36
NUP85-224ENST00000583948 SBNO1A3KN83 1393 aa17.28■□□□□ 0.36
NUP85-224ENST00000583948 USP35Q9P2H5 1018 aa17.28■□□□□ 0.36
NUP85-224ENST00000583948 COL14A1Q05707 1796 aaKnown RBP17.28■□□□□ 0.36
NUP85-224ENST00000583948 KNDC1Q76NI1 1749 aa17.27■□□□□ 0.36
NUP85-224ENST00000583948 SENP3-EIF4A1A0A087X0R7 540 aa17.27■□□□□ 0.36
NUP85-224ENST00000583948 ZNF784Q8NCA9 323 aaPredicted RBP17.27■□□□□ 0.36
NUP85-224ENST00000583948 STRN4Q9NRL3 753 aa17.27■□□□□ 0.36
NUP85-224ENST00000583948 TRPM3Q9HCF6 1732 aaPredicted RBP17.27■□□□□ 0.35
NUP85-224ENST00000583948 ABCC11Q96J66 1382 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms