RNA–Protein interactions for RNA: ENST00000583842.1

CCDC84-210, Transcript of coiled-coil domain containing 84, humanhuman

TSL 3

Gene CCDC84, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-210ENST00000583842 PHLPP1O60346 1717 aa16.15■□□□□ 0.18
CCDC84-210ENST00000583842 COL16A1Q07092 1604 aaPredicted RBP16.15■□□□□ 0.18
CCDC84-210ENST00000583842 NPHP3Q7Z494 1330 aa16.15■□□□□ 0.18
CCDC84-210ENST00000583842 ESCO1Q5FWF5 840 aa16.14■□□□□ 0.17
CCDC84-210ENST00000583842 DLC1Q96QB1 1528 aa16.14■□□□□ 0.17
CCDC84-210ENST00000583842 LAMC1P11047 1609 aa16.13■□□□□ 0.17
CCDC84-210ENST00000583842 ZNF772Q68DY9 489 aaPredicted RBP16.13■□□□□ 0.17
CCDC84-210ENST00000583842 POGKQ9P215 609 aa16.13■□□□□ 0.17
CCDC84-210ENST00000583842 TRIM26Q12899 539 aaPredicted RBP16.12■□□□□ 0.17
CCDC84-210ENST00000583842 PRAM1Q96QH2 718 aa16.12■□□□□ 0.17
CCDC84-210ENST00000583842 CDC42BPGQ6DT37 1551 aa16.11■□□□□ 0.17
CCDC84-210ENST00000583842 PLEKHH1Q9ULM0 1364 aa16.11■□□□□ 0.17
CCDC84-210ENST00000583842 NALCNQ8IZF0 1738 aa16.11■□□□□ 0.17
CCDC84-210ENST00000583842 KNDC1Q76NI1 1749 aa16.1■□□□□ 0.17
CCDC84-210ENST00000583842 ADGRB1O14514 1584 aa16.09■□□□□ 0.17
CCDC84-210ENST00000583842 FOXO3O43524 673 aa16.09■□□□□ 0.17
CCDC84-210ENST00000583842 PSME1Q06323 249 aa16.08■□□□□ 0.16
CCDC84-210ENST00000583842 TRAK1Q9UPV9 953 aa16.08■□□□□ 0.16
CCDC84-210ENST00000583842 NHSL1Q5SYE7 1610 aa16.08■□□□□ 0.16
CCDC84-210ENST00000583842 POTEAQ6S8J7 498 aa16.07■□□□□ 0.16
CCDC84-210ENST00000583842 EIF3AQ14152 1382 aaKnown RBP16.07■□□□□ 0.16
CCDC84-210ENST00000583842 PNPLA6Q8IY17 1366 aa16.07■□□□□ 0.16
CCDC84-210ENST00000583842 SHPRHQ149N8 1683 aa16.07■□□□□ 0.16
CCDC84-210ENST00000583842 WASLO00401 505 aaPredicted RBP16.06■□□□□ 0.16
CCDC84-210ENST00000583842 MEX3CQ5U5Q3 659 aaKnown RBP16.06■□□□□ 0.16
CCDC84-210ENST00000583842 DDX17Q92841 729 aaKnown RBP16.06■□□□□ 0.16
CCDC84-210ENST00000583842 PHF8Q9UPP1 1060 aa16.06■□□□□ 0.16
CCDC84-210ENST00000583842 ANKARQ7Z5J8 1434 aa16.05■□□□□ 0.16
CCDC84-210ENST00000583842 L3MBTL2Q969R5 705 aa16.05■□□□□ 0.16
CCDC84-210ENST00000583842 KRT28Q7Z3Y7 464 aa16.04■□□□□ 0.16
CCDC84-210ENST00000583842 FNBP4Q8N3X1 1017 aaPredicted RBP16.03■□□□□ 0.16
CCDC84-210ENST00000583842 SPATA31A3Q5VYP0 1347 aa16.02■□□□□ 0.16
CCDC84-210ENST00000583842 NUTM2BA6NNL0 878 aaPredicted RBP16.02■□□□□ 0.16
CCDC84-210ENST00000583842 NUTM2EB1AL46 878 aaPredicted RBP16.02■□□□□ 0.16
CCDC84-210ENST00000583842 NUTM2AQ8IVF1 878 aaPredicted RBP16.02■□□□□ 0.16
CCDC84-210ENST00000583842 SBNO1A3KN83 1393 aa16.01■□□□□ 0.15
CCDC84-210ENST00000583842 SIN3AQ96ST3 1273 aa16.01■□□□□ 0.15
CCDC84-210ENST00000583842 LRP6O75581 1613 aa16.01■□□□□ 0.15
CCDC84-210ENST00000583842 PXDNQ92626 1479 aa16■□□□□ 0.15
CCDC84-210ENST00000583842 NUTM2FA1L443 756 aa16■□□□□ 0.15
CCDC84-210ENST00000583842 NBPF1Q3BBV0 1214 aa16■□□□□ 0.15
CCDC84-210ENST00000583842 KIAA1210Q9ULL0 1709 aa15.99■□□□□ 0.15
CCDC84-210ENST00000583842 RXRBP28702 533 aa15.99■□□□□ 0.15
CCDC84-210ENST00000583842 SAFB2Q14151 953 aaKnown RBP eCLIP15.99■□□□□ 0.15
CCDC84-210ENST00000583842 NGLY1Q96IV0 654 aa15.99■□□□□ 0.15
CCDC84-210ENST00000583842 CCDC61Q9Y6R9 512 aa15.99■□□□□ 0.15
CCDC84-210ENST00000583842 ADGRB2O60241 1585 aa15.98■□□□□ 0.15
CCDC84-210ENST00000583842 FMN2Q9NZ56 1722 aa15.97■□□□□ 0.15
CCDC84-210ENST00000583842 PLEKHG3A1L390 1219 aa15.97■□□□□ 0.15
CCDC84-210ENST00000583842 QTRT2Q9H974 415 aaKnown RBP15.97■□□□□ 0.15
CCDC84-210ENST00000583842 AFF2P51816 1311 aa15.96■□□□□ 0.15
CCDC84-210ENST00000583842 MINK1Q8N4C8 1332 aaPredicted RBP15.96■□□□□ 0.15
CCDC84-210ENST00000583842 RBM6P78332 1123 aaKnown RBP15.96■□□□□ 0.15
CCDC84-210ENST00000583842 NEUROD1Q13562 356 aa15.96■□□□□ 0.15
CCDC84-210ENST00000583842 NUDT16Q96DE0 195 aaKnown RBP15.96■□□□□ 0.15
CCDC84-210ENST00000583842 CDK19Q9BWU1 502 aa15.96■□□□□ 0.15
CCDC84-210ENST00000583842 HIRIP3Q9BW71 556 aaPredicted RBP15.95■□□□□ 0.14
CCDC84-210ENST00000583842 ARHGEF10O15013 1369 aa15.95■□□□□ 0.14
CCDC84-210ENST00000583842 GPRASP1Q5JY77 1395 aa15.95■□□□□ 0.14
CCDC84-210ENST00000583842 CDK12Q9NYV4 1490 aaPredicted RBP15.95■□□□□ 0.14
CCDC84-210ENST00000583842 KIF1AQ12756 1690 aa15.95■□□□□ 0.14
CCDC84-210ENST00000583842 C8orf37Q96NL8 207 aa15.94■□□□□ 0.14
CCDC84-210ENST00000583842 TRPC5Q9UL62 973 aaPredicted RBP15.94■□□□□ 0.14
CCDC84-210ENST00000583842 COL22A1Q8NFW1 1626 aaPredicted RBP15.94■□□□□ 0.14
CCDC84-210ENST00000583842 PRR36Q9H6K5 1346 aa15.94■□□□□ 0.14
CCDC84-210ENST00000583842 ADAMTS2O95450 1211 aa15.93■□□□□ 0.14
CCDC84-210ENST00000583842 XPCQ01831 940 aaPredicted RBP15.93■□□□□ 0.14
CCDC84-210ENST00000583842 USP21Q9UK80 565 aa15.93■□□□□ 0.14
CCDC84-210ENST00000583842 TIMELESSQ9UNS1 1208 aa15.93■□□□□ 0.14
CCDC84-210ENST00000583842 CENPJQ9HC77 1338 aaPredicted RBP15.93■□□□□ 0.14
CCDC84-210ENST00000583842 SLC24A1O60721 1099 aa15.92■□□□□ 0.14
CCDC84-210ENST00000583842 NGDNQ8NEJ9 315 aaKnown RBP15.92■□□□□ 0.14
CCDC84-210ENST00000583842 PMFBP1Q8TBY8 1022 aa15.92■□□□□ 0.14
CCDC84-210ENST00000583842 TULP4Q9NRJ4 1543 aa15.92■□□□□ 0.14
CCDC84-210ENST00000583842 BRD4O60885 1362 aaPredicted RBP15.91■□□□□ 0.14
CCDC84-210ENST00000583842 NBPF8Q3BBV2 869 aa15.9■□□□□ 0.14
CCDC84-210ENST00000583842 TNS3Q68CZ2 1445 aa15.9■□□□□ 0.14
CCDC84-210ENST00000583842 POLR3AO14802 1390 aaPredicted RBP15.89■□□□□ 0.13
CCDC84-210ENST00000583842 CLSPNQ9HAW4 1339 aa15.89■□□□□ 0.13
CCDC84-210ENST00000583842 PUS7Q96PZ0 661 aaKnown RBP15.88■□□□□ 0.13
CCDC84-210ENST00000583842 UNC5CLQ8IV45 518 aa15.87■□□□□ 0.13
CCDC84-210ENST00000583842 ZNF692Q9BU19 519 aaPredicted RBP15.87■□□□□ 0.13
CCDC84-210ENST00000583842 EVC2Q86UK5 1308 aa15.87■□□□□ 0.13
CCDC84-210ENST00000583842 BCL9LQ86UU0 1499 aa15.86■□□□□ 0.13
CCDC84-210ENST00000583842 ONECUT3O60422 494 aaPredicted RBP15.86■□□□□ 0.13
CCDC84-210ENST00000583842 USP32Q8NFA0 1604 aa15.86■□□□□ 0.13
CCDC84-210ENST00000583842 ROCK2O75116 1388 aaKnown RBP15.86■□□□□ 0.13
CCDC84-210ENST00000583842 GJD4Q96KN9 370 aaPredicted RBP15.85■□□□□ 0.13
CCDC84-210ENST00000583842 ACEP12821 1306 aa15.85■□□□□ 0.13
CCDC84-210ENST00000583842 TONSLQ96HA7 1378 aa15.85■□□□□ 0.13
CCDC84-210ENST00000583842 ARHGEF28Q8N1W1 1705 aaKnown RBP15.85■□□□□ 0.13
CCDC84-210ENST00000583842 SRPK2P78362 688 aaKnown RBP15.84■□□□□ 0.13
CCDC84-210ENST00000583842 RGPD8O14715 1765 aaPredicted RBP15.84■□□□□ 0.13
CCDC84-210ENST00000583842 SBNO2Q9Y2G9 1366 aa15.84■□□□□ 0.13
CCDC84-210ENST00000583842 ATRNO75882 1429 aa15.84■□□□□ 0.13
CCDC84-210ENST00000583842 ATP7BP35670 1465 aa15.84■□□□□ 0.13
CCDC84-210ENST00000583842 SLIT2O94813 1529 aa15.84■□□□□ 0.13
CCDC84-210ENST00000583842 FAM83GA6ND36 823 aa15.83■□□□□ 0.12
CCDC84-210ENST00000583842 HAP1P54257 671 aaPredicted RBP15.83■□□□□ 0.12
CCDC84-210ENST00000583842 LMOD2Q6P5Q4 547 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms