RNA–Protein interactions for RNA: ENST00000583753.5

RNF43-207, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-207ENST00000583753 RBM42Q9BTD8 480 aaKnown RBP13.17□□□□□ -0.3
RNF43-207ENST00000583753 CAVIN1Q6NZI2 390 aaKnown RBP13.16□□□□□ -0.3
RNF43-207ENST00000583753 KDM5CP41229 1560 aa13.16□□□□□ -0.3
RNF43-207ENST00000583753 NSD3Q9BZ95 1437 aa13.15□□□□□ -0.3
RNF43-207ENST00000583753 TRIM27P14373 513 aa13.15□□□□□ -0.3
RNF43-207ENST00000583753 UHRF1BP1Q6BDS2 1440 aa13.15□□□□□ -0.3
RNF43-207ENST00000583753 NASPP49321 788 aaPredicted RBP13.15□□□□□ -0.3
RNF43-207ENST00000583753 ATF7IPQ6VMQ6 1270 aa13.15□□□□□ -0.3
RNF43-207ENST00000583753 R3HCC1Q9Y3T6 440 aaKnown RBP13.15□□□□□ -0.3
RNF43-207ENST00000583753 CASC1Q6TDU7 716 aa13.15□□□□□ -0.3
RNF43-207ENST00000583753 TNPO1Q92973 898 aaKnown RBP13.15□□□□□ -0.3
RNF43-207ENST00000583753 LRRIQ1Q96JM4 1722 aa13.14□□□□□ -0.31
RNF43-207ENST00000583753 KIF14Q15058 1648 aa13.14□□□□□ -0.31
RNF43-207ENST00000583753 SSFA2P28290 1259 aa13.13□□□□□ -0.31
RNF43-207ENST00000583753 MLECQ14165 292 aa13.13□□□□□ -0.31
RNF43-207ENST00000583753 CCDC141Q6ZP82 1450 aa13.12□□□□□ -0.31
RNF43-207ENST00000583753 DIAPH1O60610 1272 aaKnown RBP13.12□□□□□ -0.31
RNF43-207ENST00000583753 A2MP01023 1474 aa13.12□□□□□ -0.31
RNF43-207ENST00000583753 RAPGEF6Q8TEU7 1601 aa13.12□□□□□ -0.31
RNF43-207ENST00000583753 GRIN2AQ12879 1464 aa13.12□□□□□ -0.31
RNF43-207ENST00000583753 BLMP54132 1417 aaPredicted RBP13.12□□□□□ -0.31
RNF43-207ENST00000583753 HDGFL2Q7Z4V5 671 aaPredicted RBP13.11□□□□□ -0.31
RNF43-207ENST00000583753 NECTIN2Q92692 538 aa13.11□□□□□ -0.31
RNF43-207ENST00000583753 COL17A1Q9UMD9 1497 aaPredicted RBP13.11□□□□□ -0.31
RNF43-207ENST00000583753 TRIM6-TRIM34B2RNG4 842 aa13.11□□□□□ -0.31
RNF43-207ENST00000583753 PRKAR2BP31323 418 aa13.11□□□□□ -0.31
RNF43-207ENST00000583753 WDR63Q8IWG1 891 aa13.11□□□□□ -0.31
RNF43-207ENST00000583753 BCL11BQ9C0K0 894 aaPredicted RBP13.11□□□□□ -0.31
RNF43-207ENST00000583753 USP19O94966 1318 aa13.11□□□□□ -0.31
RNF43-207ENST00000583753 EVC2Q86UK5 1308 aa13.11□□□□□ -0.31
RNF43-207ENST00000583753 SYNJ2O15056 1496 aa13.11□□□□□ -0.31
RNF43-207ENST00000583753 ATP10BO94823 1461 aa13.11□□□□□ -0.31
RNF43-207ENST00000583753 ZMYM4Q5VZL5 1548 aa13.11□□□□□ -0.31
RNF43-207ENST00000583753 DISP1Q96F81 1524 aa13.11□□□□□ -0.31
RNF43-207ENST00000583753 FAM135AQ9P2D6 1515 aa13.11□□□□□ -0.31
RNF43-207ENST00000583753 PRPF40AO75400 957 aaKnown RBP13.11□□□□□ -0.31
RNF43-207ENST00000583753 CHD1LQ86WJ1 897 aa13.11□□□□□ -0.31
RNF43-207ENST00000583753 TMPOP42166 694 aaKnown RBP13.1□□□□□ -0.31
RNF43-207ENST00000583753 MAGI2Q86UL8 1455 aa13.1□□□□□ -0.31
RNF43-207ENST00000583753 KIAA1211Q6ZU35 1233 aa13.1□□□□□ -0.31
RNF43-207ENST00000583753 NGEFQ8N5V2 710 aa13.1□□□□□ -0.31
RNF43-207ENST00000583753 MRC2Q9UBG0 1479 aa13.09□□□□□ -0.31
RNF43-207ENST00000583753 TAOK2Q9UL54 1235 aa13.09□□□□□ -0.31
RNF43-207ENST00000583753 TERF2IPQ9NYB0 399 aa13.09□□□□□ -0.31
RNF43-207ENST00000583753 GPRASP1Q5JY77 1395 aa13.09□□□□□ -0.31
RNF43-207ENST00000583753 RILPL2Q969X0 211 aa13.09□□□□□ -0.31
RNF43-207ENST00000583753 MBD5Q9P267 1494 aa13.08□□□□□ -0.31
RNF43-207ENST00000583753 C14orf37Q86TY3 774 aa13.08□□□□□ -0.32
RNF43-207ENST00000583753 SKOR2Q2VWA4 1001 aaPredicted RBP13.07□□□□□ -0.32
RNF43-207ENST00000583753 ZNF521Q96K83 1311 aa13.07□□□□□ -0.32
RNF43-207ENST00000583753 DCTN1Q14203 1278 aa13.07□□□□□ -0.32
RNF43-207ENST00000583753 SCAPERQ9BY12 1400 aa13.07□□□□□ -0.32
RNF43-207ENST00000583753 K7ELQ4 463 aaPredicted RBP13.06□□□□□ -0.32
RNF43-207ENST00000583753 SMARCA5O60264 1052 aaPredicted RBP13.06□□□□□ -0.32
RNF43-207ENST00000583753 ZMYND15Q9H091 742 aa13.06□□□□□ -0.32
RNF43-207ENST00000583753 ABCA5Q8WWZ7 1642 aa13.06□□□□□ -0.32
RNF43-207ENST00000583753 KIF16BQ96L93 1317 aa13.06□□□□□ -0.32
RNF43-207ENST00000583753 KIAA0556O60303 1618 aa13.06□□□□□ -0.32
RNF43-207ENST00000583753 CHMP4BQ9H444 224 aaKnown RBP13.06□□□□□ -0.32
RNF43-207ENST00000583753 IFT140Q96RY7 1462 aa13.06□□□□□ -0.32
RNF43-207ENST00000583753 ST18O60284 1047 aa13.05□□□□□ -0.32
RNF43-207ENST00000583753 CHMP3Q9Y3E7 222 aa13.05□□□□□ -0.32
RNF43-207ENST00000583753 ARHGEF12Q9NZN5 1544 aa13.05□□□□□ -0.32
RNF43-207ENST00000583753 RBM27Q9P2N5 1060 aaKnown RBP13.05□□□□□ -0.32
RNF43-207ENST00000583753 XPCQ01831 940 aaPredicted RBP13.04□□□□□ -0.32
RNF43-207ENST00000583753 ASXL1Q8IXJ9 1541 aa13.04□□□□□ -0.32
RNF43-207ENST00000583753 SCAF11Q99590 1463 aaKnown RBP13.04□□□□□ -0.32
RNF43-207ENST00000583753 CDC45O75419 566 aa13.04□□□□□ -0.32
RNF43-207ENST00000583753 CLCN1P35523 988 aa13.04□□□□□ -0.32
RNF43-207ENST00000583753 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.03□□□□□ -0.32
RNF43-207ENST00000583753 TBC1D9Q6ZT07 1266 aa13.03□□□□□ -0.32
RNF43-207ENST00000583753 ANTXR1Q9H6X2 564 aa13.03□□□□□ -0.32
RNF43-207ENST00000583753 GAS2L3Q86XJ1 694 aa13.03□□□□□ -0.32
RNF43-207ENST00000583753 ZNF428Q96B54 188 aa13.03□□□□□ -0.32
RNF43-207ENST00000583753 CHAMP1Q96JM3 812 aa13.03□□□□□ -0.32
RNF43-207ENST00000583753 CABP1Q9NZU7 370 aa13.03□□□□□ -0.32
RNF43-207ENST00000583753 SYCP2Q9BX26 1530 aa13.03□□□□□ -0.32
RNF43-207ENST00000583753 GAS2L2Q8NHY3 880 aa13.02□□□□□ -0.32
RNF43-207ENST00000583753 PRAM1Q96QH2 718 aa13.02□□□□□ -0.32
RNF43-207ENST00000583753 C16orf71Q8IYS4 520 aaPredicted RBP13.02□□□□□ -0.32
RNF43-207ENST00000583753 ESF1Q9H501 851 aaKnown RBP13.02□□□□□ -0.32
RNF43-207ENST00000583753 ANO2Q9NQ90 1003 aa13.02□□□□□ -0.32
RNF43-207ENST00000583753 NEK4P51957 841 aa13.02□□□□□ -0.33
RNF43-207ENST00000583753 TRMT2AQ8IZ69 625 aaKnown RBP13.02□□□□□ -0.33
RNF43-207ENST00000583753 AAMPQ13685 434 aa13.01□□□□□ -0.33
RNF43-207ENST00000583753 TWISTNBQ3B726 338 aaPredicted RBP13.01□□□□□ -0.33
RNF43-207ENST00000583753 TSHZ3Q63HK5 1081 aa13.01□□□□□ -0.33
RNF43-207ENST00000583753 ADGRL2O95490 1459 aa13.01□□□□□ -0.33
RNF43-207ENST00000583753 ADAMTS12P58397 1594 aa13.01□□□□□ -0.33
RNF43-207ENST00000583753 VGFO15240 615 aaPredicted RBP13.01□□□□□ -0.33
RNF43-207ENST00000583753 OS9Q13438 667 aaPredicted RBP13.01□□□□□ -0.33
RNF43-207ENST00000583753 NINLQ9Y2I6 1382 aa13.01□□□□□ -0.33
RNF43-207ENST00000583753 SYCE3A1L190 88 aa13□□□□□ -0.33
RNF43-207ENST00000583753 FAM83GA6ND36 823 aa13□□□□□ -0.33
RNF43-207ENST00000583753 PTMSP20962 102 aa13□□□□□ -0.33
RNF43-207ENST00000583753 MIS18AQ9NYP9 233 aa13□□□□□ -0.33
RNF43-207ENST00000583753 DTNBO60941 627 aa13□□□□□ -0.33
RNF43-207ENST00000583753 GDPD2Q9HCC8 539 aa13□□□□□ -0.33
RNF43-207ENST00000583753 RRS1Q15050 365 aaKnown RBP12.99□□□□□ -0.33
RNF43-207ENST00000583753 TSPYL6Q8N831 410 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms