RNA–Protein interactions for RNA: ENST00000582486.5

GGA3-213, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5 BASIC

Gene GGA3, Length 2,319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-213ENST00000582486 ABCC11Q96J66 1382 aa15.13■□□□□ 0.01
GGA3-213ENST00000582486 NPC1L1Q9UHC9 1359 aa15.13■□□□□ 0.01
GGA3-213ENST00000582486 SRPK2P78362 688 aaKnown RBP15.13■□□□□ 0.01
GGA3-213ENST00000582486 DLC1Q96QB1 1528 aa15.12■□□□□ 0.01
GGA3-213ENST00000582486 PLEKHH1Q9ULM0 1364 aa15.11■□□□□ 0.01
GGA3-213ENST00000582486 PPP2R1AP30153 589 aa15.11■□□□□ 0.01
GGA3-213ENST00000582486 EID1Q9Y6B2 187 aa15.11■□□□□ 0.01
GGA3-213ENST00000582486 THEMISQ8N1K5 641 aaPredicted RBP15.1■□□□□ 0.01
GGA3-213ENST00000582486 PLEKHG1Q9ULL1 1385 aa15.1■□□□□ 0.01
GGA3-213ENST00000582486 RIMS1Q86UR5 1692 aaKnown RBP15.1■□□□□ 0.01
GGA3-213ENST00000582486 ADAMTS13Q76LX8 1427 aa15.1■□□□□ 0.01
GGA3-213ENST00000582486 NSD3Q9BZ95 1437 aa15.1■□□□□ 0.01
GGA3-213ENST00000582486 ZBED9Q6R2W3 1325 aa15.1■□□□□ 0.01
GGA3-213ENST00000582486 CDK19Q9BWU1 502 aa15.09■□□□□ 0.01
GGA3-213ENST00000582486 SLIT1O75093 1534 aa15.08■□□□□ 0.01
GGA3-213ENST00000582486 ARHGAP23Q9P227 1491 aa15.08■□□□□ 0
GGA3-213ENST00000582486 ATAD2Q6PL18 1390 aa15.07■□□□□ 0
GGA3-213ENST00000582486 ANKRD36BQ8N2N9 1353 aa15.07■□□□□ 0
GGA3-213ENST00000582486 SLC26A8Q96RN1 970 aa15.07■□□□□ 0
GGA3-213ENST00000582486 SENP3-EIF4A1A0A087X0R7 540 aa15.06■□□□□ 0
GGA3-213ENST00000582486 ADAMTSL3P82987 1691 aa15.06■□□□□ 0
GGA3-213ENST00000582486 TECPR2O15040 1411 aa15.05■□□□□ 0
GGA3-213ENST00000582486 SIRT1Q96EB6 747 aa15.05■□□□□ 0
GGA3-213ENST00000582486 NINLQ9Y2I6 1382 aa15.05■□□□□ 0
GGA3-213ENST00000582486 FAM135BQ49AJ0 1406 aa15.04■□□□□ -0
GGA3-213ENST00000582486 MED14O60244 1454 aa15.04■□□□□ -0
GGA3-213ENST00000582486 CGNL1Q0VF96 1302 aa15.04■□□□□ -0
GGA3-213ENST00000582486 A0A1W2PP64 1363 aa15.04■□□□□ -0
GGA3-213ENST00000582486 KNDC1Q76NI1 1749 aa15.03■□□□□ -0
GGA3-213ENST00000582486 CEP170BQ9Y4F5 1589 aaPredicted RBP15.03■□□□□ -0
GGA3-213ENST00000582486 ROBO2Q9HCK4 1378 aa15.03■□□□□ -0
GGA3-213ENST00000582486 CABP1Q9NZU7 370 aa15.03■□□□□ -0
GGA3-213ENST00000582486 WASLO00401 505 aaPredicted RBP15.02■□□□□ -0
GGA3-213ENST00000582486 MORC1Q86VD1 984 aa15.02■□□□□ -0
GGA3-213ENST00000582486 CPS1P31327 1500 aa15.02■□□□□ -0
GGA3-213ENST00000582486 TERF2IPQ9NYB0 399 aa15.01□□□□□ -0.01
GGA3-213ENST00000582486 TBX22Q9Y458 520 aa15.01□□□□□ -0.01
GGA3-213ENST00000582486 PTPRUQ92729 1446 aa15.01□□□□□ -0.01
GGA3-213ENST00000582486 CD163L1Q9NR16 1453 aa15.01□□□□□ -0.01
GGA3-213ENST00000582486 TNNT2P45379 298 aaPredicted RBP15□□□□□ -0.01
GGA3-213ENST00000582486 USP32Q8NFA0 1604 aa15□□□□□ -0.01
GGA3-213ENST00000582486 ADAMTS8Q9UP79 889 aa15□□□□□ -0.01
GGA3-213ENST00000582486 AMOTL2Q9Y2J4 779 aa14.99□□□□□ -0.01
GGA3-213ENST00000582486 MYT1Q01538 1121 aa14.99□□□□□ -0.01
GGA3-213ENST00000582486 HDGFL2Q7Z4V5 671 aaPredicted RBP14.99□□□□□ -0.01
GGA3-213ENST00000582486 WDR43Q15061 677 aaKnown RBP eCLIP14.98□□□□□ -0.01
GGA3-213ENST00000582486 SETD1BQ9UPS6 1966 aaKnown RBP14.98□□□□□ -0.01
GGA3-213ENST00000582486 INSRP06213 1382 aa14.98□□□□□ -0.01
GGA3-213ENST00000582486 SALL2Q9Y467 1007 aaPredicted RBP14.97□□□□□ -0.01
GGA3-213ENST00000582486 SUPT16HQ9Y5B9 1047 aaKnown RBP14.97□□□□□ -0.01
GGA3-213ENST00000582486 NSD2O96028 1365 aa14.97□□□□□ -0.01
GGA3-213ENST00000582486 NUDT16Q96DE0 195 aaKnown RBP14.97□□□□□ -0.01
GGA3-213ENST00000582486 BLMP54132 1417 aaPredicted RBP14.97□□□□□ -0.01
GGA3-213ENST00000582486 ANKLE2Q86XL3 938 aa14.96□□□□□ -0.01
GGA3-213ENST00000582486 FYB1O15117 783 aa14.95□□□□□ -0.02
GGA3-213ENST00000582486 GGNBP2Q9H3C7 697 aa14.95□□□□□ -0.02
GGA3-213ENST00000582486 NCKAP5LQ9HCH0 1330 aa14.95□□□□□ -0.02
GGA3-213ENST00000582486 ZNF142P52746 1687 aaPredicted RBP14.95□□□□□ -0.02
GGA3-213ENST00000582486 DIP2AQ14689 1571 aa14.95□□□□□ -0.02
GGA3-213ENST00000582486 PPIP5K1Q6PFW1 1433 aa14.95□□□□□ -0.02
GGA3-213ENST00000582486 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.94□□□□□ -0.02
GGA3-213ENST00000582486 FKBP8Q14318 412 aa14.94□□□□□ -0.02
GGA3-213ENST00000582486 CCDC61Q9Y6R9 512 aa14.94□□□□□ -0.02
GGA3-213ENST00000582486 ATP7BP35670 1465 aa14.94□□□□□ -0.02
GGA3-213ENST00000582486 POLR3AO14802 1390 aaPredicted RBP14.93□□□□□ -0.02
GGA3-213ENST00000582486 MTHFSP49914 203 aa14.93□□□□□ -0.02
GGA3-213ENST00000582486 PRR36Q9H6K5 1346 aa14.93□□□□□ -0.02
GGA3-213ENST00000582486 NEFLP07196 543 aa14.92□□□□□ -0.02
GGA3-213ENST00000582486 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.92□□□□□ -0.02
GGA3-213ENST00000582486 NUDCQ9Y266 331 aa14.92□□□□□ -0.02
GGA3-213ENST00000582486 PTCH1Q13635 1447 aa14.92□□□□□ -0.02
GGA3-213ENST00000582486 SMG6Q86US8 1419 aaKnown RBP14.92□□□□□ -0.02
GGA3-213ENST00000582486 CPSF1Q10570 1443 aaKnown RBP14.91□□□□□ -0.02
GGA3-213ENST00000582486 NUTM2FA1L443 756 aa14.91□□□□□ -0.02
GGA3-213ENST00000582486 ADGRB2O60241 1585 aa14.91□□□□□ -0.02
GGA3-213ENST00000582486 KCNA6P17658 529 aa14.91□□□□□ -0.02
GGA3-213ENST00000582486 PIK3R4Q99570 1358 aa14.9□□□□□ -0.02
GGA3-213ENST00000582486 CCDC146Q8IYE0 955 aa14.89□□□□□ -0.03
GGA3-213ENST00000582486 XRN1Q8IZH2 1706 aaKnown RBP14.88□□□□□ -0.03
GGA3-213ENST00000582486 CFAP53Q96M91 514 aa14.87□□□□□ -0.03
GGA3-213ENST00000582486 EDC4Q6P2E9 1401 aaKnown RBP14.87□□□□□ -0.03
GGA3-213ENST00000582486 CDC42BPGQ6DT37 1551 aa14.87□□□□□ -0.03
GGA3-213ENST00000582486 PDE3BQ13370 1112 aa14.87□□□□□ -0.03
GGA3-213ENST00000582486 ANKRD26Q9UPS8 1709 aa14.86□□□□□ -0.03
GGA3-213ENST00000582486 ZNF692Q9BU19 519 aaPredicted RBP14.86□□□□□ -0.03
GGA3-213ENST00000582486 KIF20BQ96Q89 1820 aa14.86□□□□□ -0.03
GGA3-213ENST00000582486 CDCA7LQ96GN5 454 aa14.86□□□□□ -0.03
GGA3-213ENST00000582486 SHPRHQ149N8 1683 aa14.85□□□□□ -0.03
GGA3-213ENST00000582486 IRX6P78412 446 aaPredicted RBP14.85□□□□□ -0.03
GGA3-213ENST00000582486 NME9Q86XW9 330 aa14.85□□□□□ -0.03
GGA3-213ENST00000582486 PLEKHG3A1L390 1219 aa14.84□□□□□ -0.03
GGA3-213ENST00000582486 APAF1O14727 1248 aa14.84□□□□□ -0.03
GGA3-213ENST00000582486 ACEP12821 1306 aa14.84□□□□□ -0.03
GGA3-213ENST00000582486 NPHP4O75161 1426 aaPredicted RBP14.84□□□□□ -0.03
GGA3-213ENST00000582486 FBLN1P23142 703 aa14.83□□□□□ -0.03
GGA3-213ENST00000582486 ZRANB1Q9UGI0 708 aa14.83□□□□□ -0.03
GGA3-213ENST00000582486 CHD2O14647 1828 aaKnown RBP14.83□□□□□ -0.04
GGA3-213ENST00000582486 MON2Q7Z3U7 1717 aa14.83□□□□□ -0.04
GGA3-213ENST00000582486 AKAP12Q02952 1782 aa14.83□□□□□ -0.04
GGA3-213ENST00000582486 TOPAZ1Q8N9V7 1692 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms