RNA–Protein interactions for RNA: ENST00000582293.1

RNF43-206, Transcript of ring finger protein 43, humanhuman

TSL 2

Gene RNF43, Length 324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-206ENST00000582293 GPRASP1Q5JY77 1395 aa23.54■■□□□ 1.36
RNF43-206ENST00000582293 CDC42BPGQ6DT37 1551 aa23.54■■□□□ 1.36
RNF43-206ENST00000582293 PIP4K2BP78356 416 aa23.54■■□□□ 1.36
RNF43-206ENST00000582293 MST1RQ04912 1400 aa23.53■■□□□ 1.36
RNF43-206ENST00000582293 TIMELESSQ9UNS1 1208 aa23.53■■□□□ 1.36
RNF43-206ENST00000582293 CADPS2Q86UW7 1296 aa23.52■■□□□ 1.36
RNF43-206ENST00000582293 SLAIN2Q9P270 581 aa23.52■■□□□ 1.36
RNF43-206ENST00000582293 ROCK2O75116 1388 aaKnown RBP23.51■■□□□ 1.35
RNF43-206ENST00000582293 ROBO1Q9Y6N7 1651 aa23.51■■□□□ 1.35
RNF43-206ENST00000582293 ATF3P18847 181 aa23.5■■□□□ 1.35
RNF43-206ENST00000582293 SAFB2Q14151 953 aaKnown RBP eCLIP23.5■■□□□ 1.35
RNF43-206ENST00000582293 ADGRB2O60241 1585 aa23.49■■□□□ 1.35
RNF43-206ENST00000582293 POGKQ9P215 609 aa23.47■■□□□ 1.35
RNF43-206ENST00000582293 SCAF1Q9H7N4 1312 aaKnown RBP23.47■■□□□ 1.35
RNF43-206ENST00000582293 C1orf167Q5SNV9 1468 aa23.47■■□□□ 1.35
RNF43-206ENST00000582293 FMN2Q9NZ56 1722 aa23.47■■□□□ 1.35
RNF43-206ENST00000582293 MINK1Q8N4C8 1332 aaPredicted RBP23.43■■□□□ 1.34
RNF43-206ENST00000582293 BRINP3Q76B58 766 aa23.42■■□□□ 1.34
RNF43-206ENST00000582293 HIRIP3Q9BW71 556 aaPredicted RBP23.42■■□□□ 1.34
RNF43-206ENST00000582293 QRICH2Q9H0J4 1663 aa23.41■■□□□ 1.34
RNF43-206ENST00000582293 USP32Q8NFA0 1604 aa23.41■■□□□ 1.34
RNF43-206ENST00000582293 HSPA1LP34931 641 aa23.41■■□□□ 1.34
RNF43-206ENST00000582293 CARD11Q9BXL7 1154 aa23.41■■□□□ 1.34
RNF43-206ENST00000582293 CENPJQ9HC77 1338 aaPredicted RBP23.39■■□□□ 1.34
RNF43-206ENST00000582293 NUTM2FA1L443 756 aa23.38■■□□□ 1.33
RNF43-206ENST00000582293 ORAI2Q96SN7 254 aa23.38■■□□□ 1.33
RNF43-206ENST00000582293 RGPD8O14715 1765 aaPredicted RBP23.37■■□□□ 1.33
RNF43-206ENST00000582293 AHDC1Q5TGY3 1603 aaPredicted RBP23.37■■□□□ 1.33
RNF43-206ENST00000582293 WASLO00401 505 aaPredicted RBP23.36■■□□□ 1.33
RNF43-206ENST00000582293 NHSL1Q5SYE7 1610 aa23.36■■□□□ 1.33
RNF43-206ENST00000582293 PRR36Q9H6K5 1346 aa23.35■■□□□ 1.33
RNF43-206ENST00000582293 TULP4Q9NRJ4 1543 aa23.34■■□□□ 1.33
RNF43-206ENST00000582293 COL16A1Q07092 1604 aaPredicted RBP23.33■■□□□ 1.33
RNF43-206ENST00000582293 PHLPP1O60346 1717 aa23.33■■□□□ 1.32
RNF43-206ENST00000582293 ANKARQ7Z5J8 1434 aa23.33■■□□□ 1.32
RNF43-206ENST00000582293 EIF3AQ14152 1382 aaKnown RBP23.32■■□□□ 1.32
RNF43-206ENST00000582293 DDX17Q92841 729 aaKnown RBP23.32■■□□□ 1.32
RNF43-206ENST00000582293 ATP7BP35670 1465 aa23.31■■□□□ 1.32
RNF43-206ENST00000582293 ESCO1Q5FWF5 840 aa23.3■■□□□ 1.32
RNF43-206ENST00000582293 CDK19Q9BWU1 502 aa23.3■■□□□ 1.32
RNF43-206ENST00000582293 SBNO2Q9Y2G9 1366 aa23.29■■□□□ 1.32
RNF43-206ENST00000582293 KIF1AQ12756 1690 aa23.28■■□□□ 1.32
RNF43-206ENST00000582293 TOPAZ1Q8N9V7 1692 aa23.28■■□□□ 1.32
RNF43-206ENST00000582293 USP47Q96K76 1375 aa23.27■■□□□ 1.31
RNF43-206ENST00000582293 ST20-MTHFSA0A0A6YYL1 179 aa23.25■■□□□ 1.31
RNF43-206ENST00000582293 TESK2Q96S53 571 aa23.25■■□□□ 1.31
RNF43-206ENST00000582293 PXDNQ92626 1479 aa23.24■■□□□ 1.31
RNF43-206ENST00000582293 NUDT16Q96DE0 195 aaKnown RBP23.24■■□□□ 1.31
RNF43-206ENST00000582293 CABP2Q9NPB3 220 aa23.23■■□□□ 1.31
RNF43-206ENST00000582293 PHF8Q9UPP1 1060 aa23.23■■□□□ 1.31
RNF43-206ENST00000582293 SOS2Q07890 1332 aaPredicted RBP23.23■■□□□ 1.31
RNF43-206ENST00000582293 ITSN1Q15811 1721 aa23.22■■□□□ 1.31
RNF43-206ENST00000582293 FOXO3O43524 673 aa23.22■■□□□ 1.31
RNF43-206ENST00000582293 EVC2Q86UK5 1308 aa23.2■■□□□ 1.3
RNF43-206ENST00000582293 PMFBP1Q8TBY8 1022 aa23.2■■□□□ 1.3
RNF43-206ENST00000582293 SRPK2P78362 688 aaKnown RBP23.19■■□□□ 1.3
RNF43-206ENST00000582293 NPHP3Q7Z494 1330 aa23.18■■□□□ 1.3
RNF43-206ENST00000582293 XPCQ01831 940 aaPredicted RBP23.18■■□□□ 1.3
RNF43-206ENST00000582293 SHPRHQ149N8 1683 aa23.17■■□□□ 1.3
RNF43-206ENST00000582293 CCDC61Q9Y6R9 512 aa23.17■■□□□ 1.3
RNF43-206ENST00000582293 PLEKHG3A1L390 1219 aa23.15■■□□□ 1.3
RNF43-206ENST00000582293 TRPM3Q9HCF6 1732 aaPredicted RBP23.15■■□□□ 1.3
RNF43-206ENST00000582293 PPIP5K1Q6PFW1 1433 aa23.15■■□□□ 1.3
RNF43-206ENST00000582293 JCADQ9P266 1359 aa23.14■■□□□ 1.3
RNF43-206ENST00000582293 POLR3AO14802 1390 aaPredicted RBP23.14■■□□□ 1.29
RNF43-206ENST00000582293 DISP3Q9P2K9 1392 aa23.14■■□□□ 1.29
RNF43-206ENST00000582293 KRT28Q7Z3Y7 464 aa23.13■■□□□ 1.29
RNF43-206ENST00000582293 PNPLA6Q8IY17 1366 aa23.13■■□□□ 1.29
RNF43-206ENST00000582293 LRRC59Q96AG4 307 aaKnown RBP23.12■■□□□ 1.29
RNF43-206ENST00000582293 HSPA5P11021 654 aaKnown RBP23.11■■□□□ 1.29
RNF43-206ENST00000582293 ACEP12821 1306 aa23.1■■□□□ 1.29
RNF43-206ENST00000582293 CABP1Q9NZU7 370 aa23.1■■□□□ 1.29
RNF43-206ENST00000582293 SPATA31A3Q5VYP0 1347 aa23.09■■□□□ 1.29
RNF43-206ENST00000582293 COL22A1Q8NFW1 1626 aaPredicted RBP23.09■■□□□ 1.29
RNF43-206ENST00000582293 ATAD2Q6PL18 1390 aa23.09■■□□□ 1.29
RNF43-206ENST00000582293 MED1Q15648 1581 aaPredicted RBP23.09■■□□□ 1.29
RNF43-206ENST00000582293 LRP6O75581 1613 aa23.08■■□□□ 1.29
RNF43-206ENST00000582293 EIF4G2P78344 907 aaKnown RBP eCLIP23.08■■□□□ 1.29
RNF43-206ENST00000582293 PSME1Q06323 249 aa23.08■■□□□ 1.29
RNF43-206ENST00000582293 NGDNQ8NEJ9 315 aaKnown RBP23.08■■□□□ 1.29
RNF43-206ENST00000582293 PUS7Q96PZ0 661 aaKnown RBP23.08■■□□□ 1.29
RNF43-206ENST00000582293 SBNO1A3KN83 1393 aa23.08■■□□□ 1.29
RNF43-206ENST00000582293 ALS2Q96Q42 1657 aa23.08■■□□□ 1.29
RNF43-206ENST00000582293 TNS3Q68CZ2 1445 aa23.07■■□□□ 1.28
RNF43-206ENST00000582293 CD163L1Q9NR16 1453 aa23.06■■□□□ 1.28
RNF43-206ENST00000582293 AKAP12Q02952 1782 aa23.05■■□□□ 1.28
RNF43-206ENST00000582293 TMF1P82094 1093 aa23.04■■□□□ 1.28
RNF43-206ENST00000582293 CPSF1Q10570 1443 aaKnown RBP23.04■■□□□ 1.28
RNF43-206ENST00000582293 SPATA31A6Q5VVP1 1343 aa23.04■■□□□ 1.28
RNF43-206ENST00000582293 SSH2Q76I76 1423 aa23.03■■□□□ 1.28
RNF43-206ENST00000582293 USP6P35125 1406 aa23.02■■□□□ 1.28
RNF43-206ENST00000582293 SLC24A1O60721 1099 aa23.02■■□□□ 1.28
RNF43-206ENST00000582293 SLC12A5Q9H2X9 1139 aa23.02■■□□□ 1.28
RNF43-206ENST00000582293 NRKQ7Z2Y5 1582 aa23.01■■□□□ 1.27
RNF43-206ENST00000582293 MON2Q7Z3U7 1717 aa23■■□□□ 1.27
RNF43-206ENST00000582293 MYOM1P52179 1685 aa23■■□□□ 1.27
RNF43-206ENST00000582293 ABCA3Q99758 1704 aa22.99■■□□□ 1.27
RNF43-206ENST00000582293 CRYBG1Q9Y4K1 1723 aa22.99■■□□□ 1.27
RNF43-206ENST00000582293 C11orf95C9JLR9 678 aaPredicted RBP22.98■■□□□ 1.27
RNF43-206ENST00000582293 TMC1Q8TDI8 760 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms