RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-223ENST00000582114 ESCO1Q5FWF5 840 aa17.3■□□□□ 0.36
CDK5RAP3-223ENST00000582114 ANKRD30BQ9BXX2 1392 aa17.29■□□□□ 0.36
CDK5RAP3-223ENST00000582114 SOS2Q07890 1332 aaPredicted RBP17.29■□□□□ 0.36
CDK5RAP3-223ENST00000582114 LAMC1P11047 1609 aa17.29■□□□□ 0.36
CDK5RAP3-223ENST00000582114 PLEKHH1Q9ULM0 1364 aa17.28■□□□□ 0.36
CDK5RAP3-223ENST00000582114 XPCQ01831 940 aaPredicted RBP17.28■□□□□ 0.36
CDK5RAP3-223ENST00000582114 QTRT2Q9H974 415 aaKnown RBP17.28■□□□□ 0.36
CDK5RAP3-223ENST00000582114 CDC42BPGQ6DT37 1551 aa17.28■□□□□ 0.36
CDK5RAP3-223ENST00000582114 UPF1Q92900 1129 aaKnown RBP eCLIP17.27■□□□□ 0.36
CDK5RAP3-223ENST00000582114 NGLY1Q96IV0 654 aa17.27■□□□□ 0.36
CDK5RAP3-223ENST00000582114 PIK3C2GO75747 1445 aa17.27■□□□□ 0.35
CDK5RAP3-223ENST00000582114 LRPPRCP42704 1394 aaKnown RBP17.27■□□□□ 0.35
CDK5RAP3-223ENST00000582114 TECPR2O15040 1411 aa17.25■□□□□ 0.35
CDK5RAP3-223ENST00000582114 FOXO3O43524 673 aa17.25■□□□□ 0.35
CDK5RAP3-223ENST00000582114 NPHP3Q7Z494 1330 aa17.23■□□□□ 0.35
CDK5RAP3-223ENST00000582114 YTHDC2Q9H6S0 1430 aaKnown RBP17.23■□□□□ 0.35
CDK5RAP3-223ENST00000582114 KNDC1Q76NI1 1749 aa17.23■□□□□ 0.35
CDK5RAP3-223ENST00000582114 ABCC11Q96J66 1382 aa17.23■□□□□ 0.35
CDK5RAP3-223ENST00000582114 RAB3GAP2Q9H2M9 1393 aa17.23■□□□□ 0.35
CDK5RAP3-223ENST00000582114 CDK12Q9NYV4 1490 aaPredicted RBP17.23■□□□□ 0.35
CDK5RAP3-223ENST00000582114 RGS12O14924 1447 aa17.22■□□□□ 0.35
CDK5RAP3-223ENST00000582114 RBM6P78332 1123 aaKnown RBP17.22■□□□□ 0.35
CDK5RAP3-223ENST00000582114 PXDNQ92626 1479 aa17.22■□□□□ 0.35
CDK5RAP3-223ENST00000582114 CFAP70Q5T0N1 1121 aa17.21■□□□□ 0.35
CDK5RAP3-223ENST00000582114 USP21Q9UK80 565 aa17.21■□□□□ 0.35
CDK5RAP3-223ENST00000582114 SAFB2Q14151 953 aaKnown RBP eCLIP17.2■□□□□ 0.34
CDK5RAP3-223ENST00000582114 COL22A1Q8NFW1 1626 aaPredicted RBP17.2■□□□□ 0.34
CDK5RAP3-223ENST00000582114 C14orf93Q9H972 538 aaKnown RBP17.19■□□□□ 0.34
CDK5RAP3-223ENST00000582114 FMN2Q9NZ56 1722 aa17.18■□□□□ 0.34
CDK5RAP3-223ENST00000582114 MYOM2P54296 1465 aa17.18■□□□□ 0.34
CDK5RAP3-223ENST00000582114 PLEKHG5O94827 1062 aa17.17■□□□□ 0.34
CDK5RAP3-223ENST00000582114 NRXN1Q9ULB1 1477 aa17.17■□□□□ 0.34
CDK5RAP3-223ENST00000582114 DHX57Q6P158 1386 aaKnown RBP17.16■□□□□ 0.34
CDK5RAP3-223ENST00000582114 PRAM1Q96QH2 718 aa17.16■□□□□ 0.34
CDK5RAP3-223ENST00000582114 TRPC5Q9UL62 973 aaPredicted RBP17.16■□□□□ 0.34
CDK5RAP3-223ENST00000582114 ACIN1Q9UKV3 1341 aaKnown RBP17.16■□□□□ 0.34
CDK5RAP3-223ENST00000582114 FNBP4Q8N3X1 1017 aaPredicted RBP17.15■□□□□ 0.34
CDK5RAP3-223ENST00000582114 RGPD8O14715 1765 aaPredicted RBP17.15■□□□□ 0.34
CDK5RAP3-223ENST00000582114 KDM2AQ9Y2K7 1162 aa17.14■□□□□ 0.33
CDK5RAP3-223ENST00000582114 KIF1AQ12756 1690 aa17.13■□□□□ 0.33
CDK5RAP3-223ENST00000582114 KRT28Q7Z3Y7 464 aa17.13■□□□□ 0.33
CDK5RAP3-223ENST00000582114 MARF1Q9Y4F3 1742 aaKnown RBP17.13■□□□□ 0.33
CDK5RAP3-223ENST00000582114 ATRNO75882 1429 aa17.13■□□□□ 0.33
CDK5RAP3-223ENST00000582114 SIRT1Q96EB6 747 aa17.12■□□□□ 0.33
CDK5RAP3-223ENST00000582114 POGKQ9P215 609 aa17.12■□□□□ 0.33
CDK5RAP3-223ENST00000582114 PHF8Q9UPP1 1060 aa17.12■□□□□ 0.33
CDK5RAP3-223ENST00000582114 SPATA31A3Q5VYP0 1347 aa17.12■□□□□ 0.33
CDK5RAP3-223ENST00000582114 TRAK1Q9UPV9 953 aa17.11■□□□□ 0.33
CDK5RAP3-223ENST00000582114 BCL9LQ86UU0 1499 aa17.11■□□□□ 0.33
CDK5RAP3-223ENST00000582114 DCAF11Q8TEB1 546 aa17.1■□□□□ 0.33
CDK5RAP3-223ENST00000582114 HIRIP3Q9BW71 556 aaPredicted RBP17.1■□□□□ 0.33
CDK5RAP3-223ENST00000582114 LMOD2Q6P5Q4 547 aa17.09■□□□□ 0.33
CDK5RAP3-223ENST00000582114 PMFBP1Q8TBY8 1022 aa17.09■□□□□ 0.33
CDK5RAP3-223ENST00000582114 CABLES1Q8TDN4 633 aa17.09■□□□□ 0.33
CDK5RAP3-223ENST00000582114 ATAD2Q6PL18 1390 aa17.08■□□□□ 0.32
CDK5RAP3-223ENST00000582114 HAP1P54257 671 aaPredicted RBP17.08■□□□□ 0.32
CDK5RAP3-223ENST00000582114 ADGRB1O14514 1584 aa17.07■□□□□ 0.32
CDK5RAP3-223ENST00000582114 DLC1Q96QB1 1528 aa17.07■□□□□ 0.32
CDK5RAP3-223ENST00000582114 TNS3Q68CZ2 1445 aa17.07■□□□□ 0.32
CDK5RAP3-223ENST00000582114 MINK1Q8N4C8 1332 aaPredicted RBP17.07■□□□□ 0.32
CDK5RAP3-223ENST00000582114 PSME1Q06323 249 aa17.07■□□□□ 0.32
CDK5RAP3-223ENST00000582114 GJD4Q96KN9 370 aaPredicted RBP17.06■□□□□ 0.32
CDK5RAP3-223ENST00000582114 USP32Q8NFA0 1604 aa17.06■□□□□ 0.32
CDK5RAP3-223ENST00000582114 UNC5CLQ8IV45 518 aa17.04■□□□□ 0.32
CDK5RAP3-223ENST00000582114 SLIT2O94813 1529 aa17.03■□□□□ 0.32
CDK5RAP3-223ENST00000582114 ADGRB2O60241 1585 aa17.02■□□□□ 0.32
CDK5RAP3-223ENST00000582114 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.02■□□□□ 0.32
CDK5RAP3-223ENST00000582114 RALGAPBQ86X10 1494 aa17.02■□□□□ 0.32
CDK5RAP3-223ENST00000582114 EP400Q96L91 3159 aa17.02■□□□□ 0.31
CDK5RAP3-223ENST00000582114 ANKARQ7Z5J8 1434 aa17.02■□□□□ 0.31
CDK5RAP3-223ENST00000582114 SBNO1A3KN83 1393 aa17.02■□□□□ 0.31
CDK5RAP3-223ENST00000582114 PRR36Q9H6K5 1346 aa17.01■□□□□ 0.31
CDK5RAP3-223ENST00000582114 GLI3P10071 1580 aa17.01■□□□□ 0.31
CDK5RAP3-223ENST00000582114 ABCA3Q99758 1704 aa17.01■□□□□ 0.31
CDK5RAP3-223ENST00000582114 CCDC9Q9Y3X0 531 aaKnown RBP17■□□□□ 0.31
CDK5RAP3-223ENST00000582114 ARHGEF10O15013 1369 aa17■□□□□ 0.31
CDK5RAP3-223ENST00000582114 PLCH1Q4KWH8 1693 aa16.99■□□□□ 0.31
CDK5RAP3-223ENST00000582114 TULP4Q9NRJ4 1543 aa16.98■□□□□ 0.31
CDK5RAP3-223ENST00000582114 WASLO00401 505 aaPredicted RBP16.98■□□□□ 0.31
CDK5RAP3-223ENST00000582114 TRPM3Q9HCF6 1732 aaPredicted RBP16.97■□□□□ 0.31
CDK5RAP3-223ENST00000582114 HRCP23327 699 aa16.97■□□□□ 0.31
CDK5RAP3-223ENST00000582114 GPRASP1Q5JY77 1395 aa16.97■□□□□ 0.31
CDK5RAP3-223ENST00000582114 ARHGEF28Q8N1W1 1705 aaKnown RBP16.96■□□□□ 0.31
CDK5RAP3-223ENST00000582114 FAM83GA6ND36 823 aa16.96■□□□□ 0.31
CDK5RAP3-223ENST00000582114 PAK3O75914 559 aaPredicted RBP16.96■□□□□ 0.31
CDK5RAP3-223ENST00000582114 NGDNQ8NEJ9 315 aaKnown RBP16.96■□□□□ 0.31
CDK5RAP3-223ENST00000582114 EIF3AQ14152 1382 aaKnown RBP16.96■□□□□ 0.31
CDK5RAP3-223ENST00000582114 VPS72Q15906 364 aa16.95■□□□□ 0.3
CDK5RAP3-223ENST00000582114 SEPT12Q8IYM1 358 aa16.95■□□□□ 0.3
CDK5RAP3-223ENST00000582114 BRWD3Q6RI45 1802 aa16.95■□□□□ 0.3
CDK5RAP3-223ENST00000582114 NWD2Q9ULI1 1742 aa16.94■□□□□ 0.3
CDK5RAP3-223ENST00000582114 STAC3Q96MF2 364 aa16.94■□□□□ 0.3
CDK5RAP3-223ENST00000582114 ALS2Q96Q42 1657 aa16.94■□□□□ 0.3
CDK5RAP3-223ENST00000582114 A0A0G2JS52 829 aa16.93■□□□□ 0.3
CDK5RAP3-223ENST00000582114 MYT1Q01538 1121 aa16.93■□□□□ 0.3
CDK5RAP3-223ENST00000582114 NUDT16Q96DE0 195 aaKnown RBP16.92■□□□□ 0.3
CDK5RAP3-223ENST00000582114 BTG4Q9NY30 223 aa16.92■□□□□ 0.3
CDK5RAP3-223ENST00000582114 ATP7BP35670 1465 aa16.92■□□□□ 0.3
CDK5RAP3-223ENST00000582114 NBPF1Q3BBV0 1214 aa16.9■□□□□ 0.3
CDK5RAP3-223ENST00000582114 CCDC125Q86Z20 511 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms