RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 TECPR2O15040 1411 aa17.76■□□□□ 0.43
SRSF1-204ENST00000581979 C1orf167Q5SNV9 1468 aa17.76■□□□□ 0.43
SRSF1-204ENST00000581979 DIEXFQ68CQ4 756 aaKnown RBP17.74■□□□□ 0.43
SRSF1-204ENST00000581979 LRPPRCP42704 1394 aaKnown RBP17.74■□□□□ 0.43
SRSF1-204ENST00000581979 LRP6O75581 1613 aa17.73■□□□□ 0.43
SRSF1-204ENST00000581979 ABCC11Q96J66 1382 aa17.73■□□□□ 0.43
SRSF1-204ENST00000581979 NRXN1Q9ULB1 1477 aa17.73■□□□□ 0.43
SRSF1-204ENST00000581979 POTEAQ6S8J7 498 aa17.72■□□□□ 0.43
SRSF1-204ENST00000581979 MYOM2P54296 1465 aa17.72■□□□□ 0.43
SRSF1-204ENST00000581979 LAMC1P11047 1609 aa17.72■□□□□ 0.43
SRSF1-204ENST00000581979 LRRC59Q96AG4 307 aaKnown RBP17.71■□□□□ 0.43
SRSF1-204ENST00000581979 KNDC1Q76NI1 1749 aa17.71■□□□□ 0.42
SRSF1-204ENST00000581979 CDC42BPGQ6DT37 1551 aa17.71■□□□□ 0.42
SRSF1-204ENST00000581979 RALGAPBQ86X10 1494 aa17.7■□□□□ 0.42
SRSF1-204ENST00000581979 TMEM132EQ6IEE7 984 aa17.7■□□□□ 0.42
SRSF1-204ENST00000581979 HIRIP3Q9BW71 556 aaPredicted RBP17.7■□□□□ 0.42
SRSF1-204ENST00000581979 C14orf93Q9H972 538 aaKnown RBP17.7■□□□□ 0.42
SRSF1-204ENST00000581979 EIF4G2P78344 907 aaKnown RBP eCLIP17.69■□□□□ 0.42
SRSF1-204ENST00000581979 STK26Q9P289 416 aa17.69■□□□□ 0.42
SRSF1-204ENST00000581979 TRPM1Q7Z4N2 1603 aa17.69■□□□□ 0.42
SRSF1-204ENST00000581979 DDX17Q92841 729 aaKnown RBP17.69■□□□□ 0.42
SRSF1-204ENST00000581979 ORAI2Q96SN7 254 aa17.69■□□□□ 0.42
SRSF1-204ENST00000581979 YTHDC2Q9H6S0 1430 aaKnown RBP17.68■□□□□ 0.42
SRSF1-204ENST00000581979 SIRT1Q96EB6 747 aa17.68■□□□□ 0.42
SRSF1-204ENST00000581979 HSPA5P11021 654 aaKnown RBP17.67■□□□□ 0.42
SRSF1-204ENST00000581979 WAPLQ7Z5K2 1190 aa17.67■□□□□ 0.42
SRSF1-204ENST00000581979 SOS2Q07890 1332 aaPredicted RBP17.66■□□□□ 0.42
SRSF1-204ENST00000581979 MEX3CQ5U5Q3 659 aaKnown RBP17.66■□□□□ 0.42
SRSF1-204ENST00000581979 PNPLA6Q8IY17 1366 aa17.66■□□□□ 0.42
SRSF1-204ENST00000581979 PLEKHH1Q9ULM0 1364 aa17.66■□□□□ 0.42
SRSF1-204ENST00000581979 CFAP70Q5T0N1 1121 aa17.65■□□□□ 0.42
SRSF1-204ENST00000581979 STAC3Q96MF2 364 aa17.64■□□□□ 0.41
SRSF1-204ENST00000581979 NUTM2BA6NNL0 878 aaPredicted RBP17.64■□□□□ 0.41
SRSF1-204ENST00000581979 NUTM2EB1AL46 878 aaPredicted RBP17.64■□□□□ 0.41
SRSF1-204ENST00000581979 ZNF772Q68DY9 489 aaPredicted RBP17.64■□□□□ 0.41
SRSF1-204ENST00000581979 NUTM2AQ8IVF1 878 aaPredicted RBP17.64■□□□□ 0.41
SRSF1-204ENST00000581979 ROCK2O75116 1388 aaKnown RBP17.63■□□□□ 0.41
SRSF1-204ENST00000581979 CARD11Q9BXL7 1154 aa17.62■□□□□ 0.41
SRSF1-204ENST00000581979 ESCO1Q5FWF5 840 aa17.61■□□□□ 0.41
SRSF1-204ENST00000581979 USP47Q96K76 1375 aa17.61■□□□□ 0.41
SRSF1-204ENST00000581979 NPHP3Q7Z494 1330 aa17.6■□□□□ 0.41
SRSF1-204ENST00000581979 FMN2Q9NZ56 1722 aa17.6■□□□□ 0.41
SRSF1-204ENST00000581979 ADGRB1O14514 1584 aa17.59■□□□□ 0.41
SRSF1-204ENST00000581979 DLC1Q96QB1 1528 aa17.59■□□□□ 0.41
SRSF1-204ENST00000581979 PXDNQ92626 1479 aa17.58■□□□□ 0.41
SRSF1-204ENST00000581979 KIAA1210Q9ULL0 1709 aa17.57■□□□□ 0.4
SRSF1-204ENST00000581979 AFF2P51816 1311 aa17.57■□□□□ 0.4
SRSF1-204ENST00000581979 COL22A1Q8NFW1 1626 aaPredicted RBP17.57■□□□□ 0.4
SRSF1-204ENST00000581979 NUTM2FA1L443 756 aa17.56■□□□□ 0.4
SRSF1-204ENST00000581979 FOXO3O43524 673 aa17.56■□□□□ 0.4
SRSF1-204ENST00000581979 PRAM1Q96QH2 718 aa17.56■□□□□ 0.4
SRSF1-204ENST00000581979 GPRASP1Q5JY77 1395 aa17.56■□□□□ 0.4
SRSF1-204ENST00000581979 NBPF1Q3BBV0 1214 aa17.55■□□□□ 0.4
SRSF1-204ENST00000581979 KIF1AQ12756 1690 aa17.54■□□□□ 0.4
SRSF1-204ENST00000581979 C8orf37Q96NL8 207 aa17.54■□□□□ 0.4
SRSF1-204ENST00000581979 DDX10Q13206 875 aaKnown RBP17.53■□□□□ 0.4
SRSF1-204ENST00000581979 RXRBP28702 533 aa17.52■□□□□ 0.4
SRSF1-204ENST00000581979 ADGRB2O60241 1585 aa17.52■□□□□ 0.4
SRSF1-204ENST00000581979 ADAMTS2O95450 1211 aa17.52■□□□□ 0.39
SRSF1-204ENST00000581979 POGKQ9P215 609 aa17.52■□□□□ 0.39
SRSF1-204ENST00000581979 CDK12Q9NYV4 1490 aaPredicted RBP17.51■□□□□ 0.39
SRSF1-204ENST00000581979 XPCQ01831 940 aaPredicted RBP17.51■□□□□ 0.39
SRSF1-204ENST00000581979 SAFB2Q14151 953 aaKnown RBP eCLIP17.51■□□□□ 0.39
SRSF1-204ENST00000581979 TRAK1Q9UPV9 953 aa17.51■□□□□ 0.39
SRSF1-204ENST00000581979 RGPD8O14715 1765 aaPredicted RBP17.5■□□□□ 0.39
SRSF1-204ENST00000581979 NGLY1Q96IV0 654 aa17.5■□□□□ 0.39
SRSF1-204ENST00000581979 WASHC2AQ641Q2 1341 aa17.5■□□□□ 0.39
SRSF1-204ENST00000581979 PHF8Q9UPP1 1060 aa17.5■□□□□ 0.39
SRSF1-204ENST00000581979 ANKARQ7Z5J8 1434 aa17.49■□□□□ 0.39
SRSF1-204ENST00000581979 ST20-MTHFSA0A0A6YYL1 179 aa17.49■□□□□ 0.39
SRSF1-204ENST00000581979 SPATA31A3Q5VYP0 1347 aa17.48■□□□□ 0.39
SRSF1-204ENST00000581979 FNBP4Q8N3X1 1017 aaPredicted RBP17.48■□□□□ 0.39
SRSF1-204ENST00000581979 QTRT2Q9H974 415 aaKnown RBP17.48■□□□□ 0.39
SRSF1-204ENST00000581979 CCDC7Q96M83 1385 aa17.48■□□□□ 0.39
SRSF1-204ENST00000581979 KRT28Q7Z3Y7 464 aa17.47■□□□□ 0.39
SRSF1-204ENST00000581979 USP32Q8NFA0 1604 aa17.47■□□□□ 0.39
SRSF1-204ENST00000581979 C11orf95C9JLR9 678 aaPredicted RBP17.47■□□□□ 0.39
SRSF1-204ENST00000581979 RBM6P78332 1123 aaKnown RBP17.47■□□□□ 0.39
SRSF1-204ENST00000581979 MIER1Q8N108 512 aa17.46■□□□□ 0.39
SRSF1-204ENST00000581979 KIF7Q2M1P5 1343 aa17.45■□□□□ 0.38
SRSF1-204ENST00000581979 MARF1Q9Y4F3 1742 aaKnown RBP17.44■□□□□ 0.38
SRSF1-204ENST00000581979 PSME1Q06323 249 aa17.44■□□□□ 0.38
SRSF1-204ENST00000581979 USP21Q9UK80 565 aa17.44■□□□□ 0.38
SRSF1-204ENST00000581979 EIF3AQ14152 1382 aaKnown RBP17.44■□□□□ 0.38
SRSF1-204ENST00000581979 MINK1Q8N4C8 1332 aaPredicted RBP17.44■□□□□ 0.38
SRSF1-204ENST00000581979 ARHGEF28Q8N1W1 1705 aaKnown RBP17.44■□□□□ 0.38
SRSF1-204ENST00000581979 SBNO1A3KN83 1393 aa17.44■□□□□ 0.38
SRSF1-204ENST00000581979 TNS3Q68CZ2 1445 aa17.43■□□□□ 0.38
SRSF1-204ENST00000581979 WASLO00401 505 aaPredicted RBP17.43■□□□□ 0.38
SRSF1-204ENST00000581979 TULP4Q9NRJ4 1543 aa17.43■□□□□ 0.38
SRSF1-204ENST00000581979 RGS12O14924 1447 aa17.42■□□□□ 0.38
SRSF1-204ENST00000581979 TRPC5Q9UL62 973 aaPredicted RBP17.41■□□□□ 0.38
SRSF1-204ENST00000581979 PRR36Q9H6K5 1346 aa17.41■□□□□ 0.38
SRSF1-204ENST00000581979 BCL9LQ86UU0 1499 aa17.41■□□□□ 0.38
SRSF1-204ENST00000581979 PMFBP1Q8TBY8 1022 aa17.41■□□□□ 0.38
SRSF1-204ENST00000581979 POLR3GLQ9BT43 218 aa17.41■□□□□ 0.38
SRSF1-204ENST00000581979 ATRNO75882 1429 aa17.41■□□□□ 0.38
SRSF1-204ENST00000581979 UPF1Q92900 1129 aaKnown RBP eCLIP17.4■□□□□ 0.381e-16■□□□□ 9.5
SRSF1-204ENST00000581979 ARHGEF10O15013 1369 aa17.39■□□□□ 0.37
SRSF1-204ENST00000581979 TRPM3Q9HCF6 1732 aaPredicted RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms