RNA–Protein interactions for RNA: ENST00000581767.1

DDX42-214, Transcript of DEAD-box helicase 42, humanhuman

Gene DDX42, Length 2,244 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-214ENST00000581767 LAMC1P11047 1609 aa12.58□□□□□ -0.39
DDX42-214ENST00000581767 PNPLA6Q8IY17 1366 aa12.58□□□□□ -0.4
DDX42-214ENST00000581767 HRCP23327 699 aa12.58□□□□□ -0.4
DDX42-214ENST00000581767 DDX17Q92841 729 aaKnown RBP12.58□□□□□ -0.4
DDX42-214ENST00000581767 ORAI2Q96SN7 254 aa12.58□□□□□ -0.4
DDX42-214ENST00000581767 TMEM132EQ6IEE7 984 aa12.57□□□□□ -0.4
DDX42-214ENST00000581767 SIRT1Q96EB6 747 aa12.57□□□□□ -0.4
DDX42-214ENST00000581767 C14orf93Q9H972 538 aaKnown RBP12.57□□□□□ -0.4
DDX42-214ENST00000581767 DHX57Q6P158 1386 aaKnown RBP12.57□□□□□ -0.4
DDX42-214ENST00000581767 YTHDC2Q9H6S0 1430 aaKnown RBP12.57□□□□□ -0.4
DDX42-214ENST00000581767 SOS2Q07890 1332 aaPredicted RBP12.57□□□□□ -0.4
DDX42-214ENST00000581767 NRXN1Q9ULB1 1477 aa12.56□□□□□ -0.4
DDX42-214ENST00000581767 NPHP3Q7Z494 1330 aa12.56□□□□□ -0.4
DDX42-214ENST00000581767 ESCO1Q5FWF5 840 aa12.56□□□□□ -0.4
DDX42-214ENST00000581767 WAPLQ7Z5K2 1190 aa12.56□□□□□ -0.4
DDX42-214ENST00000581767 AFF2P51816 1311 aa12.54□□□□□ -0.4
DDX42-214ENST00000581767 RXRBP28702 533 aa12.54□□□□□ -0.4
DDX42-214ENST00000581767 CFAP70Q5T0N1 1121 aa12.54□□□□□ -0.4
DDX42-214ENST00000581767 STAC3Q96MF2 364 aa12.53□□□□□ -0.4
DDX42-214ENST00000581767 C8orf37Q96NL8 207 aa12.53□□□□□ -0.4
DDX42-214ENST00000581767 PLEKHH1Q9ULM0 1364 aa12.53□□□□□ -0.4
DDX42-214ENST00000581767 FMN2Q9NZ56 1722 aa12.52□□□□□ -0.41
DDX42-214ENST00000581767 NUTM2FA1L443 756 aa12.51□□□□□ -0.41
DDX42-214ENST00000581767 NGLY1Q96IV0 654 aa12.51□□□□□ -0.41
DDX42-214ENST00000581767 CDK12Q9NYV4 1490 aaPredicted RBP12.51□□□□□ -0.41
DDX42-214ENST00000581767 KIF1AQ12756 1690 aa12.51□□□□□ -0.41
DDX42-214ENST00000581767 DLC1Q96QB1 1528 aa12.5□□□□□ -0.41
DDX42-214ENST00000581767 ADAMTS2O95450 1211 aa12.5□□□□□ -0.41
DDX42-214ENST00000581767 POGKQ9P215 609 aa12.5□□□□□ -0.41
DDX42-214ENST00000581767 COL22A1Q8NFW1 1626 aaPredicted RBP12.5□□□□□ -0.41
DDX42-214ENST00000581767 FOXO3O43524 673 aa12.5□□□□□ -0.41
DDX42-214ENST00000581767 PXDNQ92626 1479 aa12.49□□□□□ -0.41
DDX42-214ENST00000581767 DCAF11Q8TEB1 546 aa12.49□□□□□ -0.41
DDX42-214ENST00000581767 PRAM1Q96QH2 718 aa12.49□□□□□ -0.41
DDX42-214ENST00000581767 QTRT2Q9H974 415 aaKnown RBP12.49□□□□□ -0.41
DDX42-214ENST00000581767 KDM2AQ9Y2K7 1162 aa12.49□□□□□ -0.41
DDX42-214ENST00000581767 RBM6P78332 1123 aaKnown RBP12.48□□□□□ -0.41
DDX42-214ENST00000581767 XPCQ01831 940 aaPredicted RBP12.47□□□□□ -0.41
DDX42-214ENST00000581767 PSME1Q06323 249 aa12.47□□□□□ -0.41
DDX42-214ENST00000581767 PHF8Q9UPP1 1060 aa12.47□□□□□ -0.41
DDX42-214ENST00000581767 SAFB2Q14151 953 aaKnown RBP eCLIP12.46□□□□□ -0.41
DDX42-214ENST00000581767 KRT28Q7Z3Y7 464 aa12.46□□□□□ -0.41
DDX42-214ENST00000581767 USP21Q9UK80 565 aa12.46□□□□□ -0.41
DDX42-214ENST00000581767 EIF3AQ14152 1382 aaKnown RBP12.46□□□□□ -0.41
DDX42-214ENST00000581767 ADGRB1O14514 1584 aa12.46□□□□□ -0.41
DDX42-214ENST00000581767 TRAK1Q9UPV9 953 aa12.46□□□□□ -0.42
DDX42-214ENST00000581767 ANKARQ7Z5J8 1434 aa12.45□□□□□ -0.42
DDX42-214ENST00000581767 TRPC5Q9UL62 973 aaPredicted RBP12.45□□□□□ -0.42
DDX42-214ENST00000581767 SPATA31A3Q5VYP0 1347 aa12.45□□□□□ -0.42
DDX42-214ENST00000581767 ADGRB2O60241 1585 aa12.44□□□□□ -0.42
DDX42-214ENST00000581767 FNBP4Q8N3X1 1017 aaPredicted RBP12.44□□□□□ -0.42
DDX42-214ENST00000581767 UPF1Q92900 1129 aaKnown RBP eCLIP12.43□□□□□ -0.426e-10■■■■□ 21.3
DDX42-214ENST00000581767 HAP1P54257 671 aaPredicted RBP12.42□□□□□ -0.42
DDX42-214ENST00000581767 SBNO1A3KN83 1393 aa12.42□□□□□ -0.42
DDX42-214ENST00000581767 TNS3Q68CZ2 1445 aa12.42□□□□□ -0.42
DDX42-214ENST00000581767 MARF1Q9Y4F3 1742 aaKnown RBP12.42□□□□□ -0.42
DDX42-214ENST00000581767 RGS12O14924 1447 aa12.42□□□□□ -0.42
DDX42-214ENST00000581767 MINK1Q8N4C8 1332 aaPredicted RBP12.42□□□□□ -0.42
DDX42-214ENST00000581767 RGPD8O14715 1765 aaPredicted RBP12.41□□□□□ -0.42
DDX42-214ENST00000581767 ATRNO75882 1429 aa12.41□□□□□ -0.42
DDX42-214ENST00000581767 ARHGEF10O15013 1369 aa12.41□□□□□ -0.42
DDX42-214ENST00000581767 HIRIP3Q9BW71 556 aaPredicted RBP12.4□□□□□ -0.42
DDX42-214ENST00000581767 GPRASP1Q5JY77 1395 aa12.4□□□□□ -0.42
DDX42-214ENST00000581767 WASLO00401 505 aaPredicted RBP12.39□□□□□ -0.43
DDX42-214ENST00000581767 TULP4Q9NRJ4 1543 aa12.39□□□□□ -0.43
DDX42-214ENST00000581767 LMOD2Q6P5Q4 547 aa12.39□□□□□ -0.43
DDX42-214ENST00000581767 PMFBP1Q8TBY8 1022 aa12.39□□□□□ -0.43
DDX42-214ENST00000581767 USP32Q8NFA0 1604 aa12.39□□□□□ -0.43
DDX42-214ENST00000581767 KIAA1210Q9ULL0 1709 aa12.38□□□□□ -0.43
DDX42-214ENST00000581767 ATAD2Q6PL18 1390 aa12.38□□□□□ -0.43
DDX42-214ENST00000581767 BCL9LQ86UU0 1499 aa12.37□□□□□ -0.43
DDX42-214ENST00000581767 ARHGEF28Q8N1W1 1705 aaKnown RBP12.37□□□□□ -0.43
DDX42-214ENST00000581767 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.37□□□□□ -0.43
DDX42-214ENST00000581767 UNC5CLQ8IV45 518 aa12.37□□□□□ -0.43
DDX42-214ENST00000581767 NGDNQ8NEJ9 315 aaKnown RBP12.36□□□□□ -0.43
DDX42-214ENST00000581767 GJD4Q96KN9 370 aaPredicted RBP12.36□□□□□ -0.43
DDX42-214ENST00000581767 PRR36Q9H6K5 1346 aa12.36□□□□□ -0.43
DDX42-214ENST00000581767 SLIT2O94813 1529 aa12.36□□□□□ -0.43
DDX42-214ENST00000581767 ITSN1Q15811 1721 aa12.35□□□□□ -0.43
DDX42-214ENST00000581767 PLEKHG5O94827 1062 aa12.34□□□□□ -0.43
DDX42-214ENST00000581767 CABLES1Q8TDN4 633 aa12.34□□□□□ -0.43
DDX42-214ENST00000581767 NUDT16Q96DE0 195 aaKnown RBP12.34□□□□□ -0.43
DDX42-214ENST00000581767 TRPM3Q9HCF6 1732 aaPredicted RBP12.33□□□□□ -0.44
DDX42-214ENST00000581767 ABCA3Q99758 1704 aa12.33□□□□□ -0.44
DDX42-214ENST00000581767 CDK19Q9BWU1 502 aa12.33□□□□□ -0.44
DDX42-214ENST00000581767 NWD2Q9ULI1 1742 aa12.32□□□□□ -0.44
DDX42-214ENST00000581767 PAK3O75914 559 aaPredicted RBP12.32□□□□□ -0.44
DDX42-214ENST00000581767 RALGAPBQ86X10 1494 aa12.32□□□□□ -0.44
DDX42-214ENST00000581767 VPS72Q15906 364 aa12.31□□□□□ -0.44
DDX42-214ENST00000581767 CCDC9Q9Y3X0 531 aaKnown RBP12.31□□□□□ -0.44
DDX42-214ENST00000581767 ATP7BP35670 1465 aa12.31□□□□□ -0.44
DDX42-214ENST00000581767 ALS2Q96Q42 1657 aa12.31□□□□□ -0.44
DDX42-214ENST00000581767 PLCH1Q4KWH8 1693 aa12.31□□□□□ -0.44
DDX42-214ENST00000581767 NBPF1Q3BBV0 1214 aa12.31□□□□□ -0.44
DDX42-214ENST00000581767 CCDC125Q86Z20 511 aa12.3□□□□□ -0.44
DDX42-214ENST00000581767 CENPJQ9HC77 1338 aaPredicted RBP12.3□□□□□ -0.44
DDX42-214ENST00000581767 GLI3P10071 1580 aa12.3□□□□□ -0.44
DDX42-214ENST00000581767 CCDC61Q9Y6R9 512 aa12.3□□□□□ -0.44
DDX42-214ENST00000581767 L3MBTL2Q969R5 705 aa12.29□□□□□ -0.44
DDX42-214ENST00000581767 FAM83GA6ND36 823 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms