RNA–Protein interactions for RNA: ENST00000579289.1

SUPT4H1-203, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 3

Gene SUPT4H1, Length 318 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-203ENST00000579289 GJD4Q96KN9 370 aaPredicted RBP17.43■□□□□ 0.38
SUPT4H1-203ENST00000579289 SLIT2O94813 1529 aa17.42■□□□□ 0.38
SUPT4H1-203ENST00000579289 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.42■□□□□ 0.38
SUPT4H1-203ENST00000579289 CLTCL1P53675 1640 aa17.42■□□□□ 0.38
SUPT4H1-203ENST00000579289 BRWD3Q6RI45 1802 aa17.4■□□□□ 0.38
SUPT4H1-203ENST00000579289 BLMP54132 1417 aaPredicted RBP17.4■□□□□ 0.38
SUPT4H1-203ENST00000579289 RALGAPBQ86X10 1494 aa17.4■□□□□ 0.38
SUPT4H1-203ENST00000579289 DEFB132Q7Z7B7 95 aa17.4■□□□□ 0.38
SUPT4H1-203ENST00000579289 APLP2Q06481 763 aa17.36■□□□□ 0.37
SUPT4H1-203ENST00000579289 FOXD1Q16676 465 aa17.36■□□□□ 0.37
SUPT4H1-203ENST00000579289 ONECUT3O60422 494 aaPredicted RBP17.35■□□□□ 0.37
SUPT4H1-203ENST00000579289 ZNF326Q5BKZ1 582 aaKnown RBP17.35■□□□□ 0.37
SUPT4H1-203ENST00000579289 CDC42BPGQ6DT37 1551 aa17.35■□□□□ 0.37
SUPT4H1-203ENST00000579289 UNC5CLQ8IV45 518 aa17.34■□□□□ 0.37
SUPT4H1-203ENST00000579289 HFM1A2PYH4 1435 aa17.33■□□□□ 0.36
SUPT4H1-203ENST00000579289 NPHP3Q7Z494 1330 aa17.33■□□□□ 0.36
SUPT4H1-203ENST00000579289 FOXO3O43524 673 aa17.31■□□□□ 0.36
SUPT4H1-203ENST00000579289 XPCQ01831 940 aaPredicted RBP17.31■□□□□ 0.36
SUPT4H1-203ENST00000579289 SPATA31A3Q5VYP0 1347 aa17.29■□□□□ 0.36
SUPT4H1-203ENST00000579289 ESCO1Q5FWF5 840 aa17.29■□□□□ 0.36
SUPT4H1-203ENST00000579289 USP32Q8NFA0 1604 aa17.29■□□□□ 0.36
SUPT4H1-203ENST00000579289 HRCP23327 699 aa17.28■□□□□ 0.36
SUPT4H1-203ENST00000579289 SEPT12Q8IYM1 358 aa17.28■□□□□ 0.36
SUPT4H1-203ENST00000579289 KIF1BO60333 1816 aa17.27■□□□□ 0.36
SUPT4H1-203ENST00000579289 TECPR2O15040 1411 aa17.26■□□□□ 0.35
SUPT4H1-203ENST00000579289 NAIPQ13075 1403 aa17.26■□□□□ 0.35
SUPT4H1-203ENST00000579289 PPLO60437 1756 aa17.25■□□□□ 0.35
SUPT4H1-203ENST00000579289 VGFO15240 615 aaPredicted RBP17.25■□□□□ 0.35
SUPT4H1-203ENST00000579289 VPS72Q15906 364 aa17.25■□□□□ 0.35
SUPT4H1-203ENST00000579289 PLEKHH1Q9ULM0 1364 aa17.24■□□□□ 0.35
SUPT4H1-203ENST00000579289 PSDA5PKW4 1024 aaPredicted RBP17.23■□□□□ 0.35
SUPT4H1-203ENST00000579289 NWD2Q9ULI1 1742 aa17.22■□□□□ 0.35
SUPT4H1-203ENST00000579289 WAPLQ7Z5K2 1190 aa17.22■□□□□ 0.35
SUPT4H1-203ENST00000579289 PLCH1Q4KWH8 1693 aa17.22■□□□□ 0.35
SUPT4H1-203ENST00000579289 RPGRIP1LQ68CZ1 1315 aa17.21■□□□□ 0.35
SUPT4H1-203ENST00000579289 ABCA3Q99758 1704 aa17.21■□□□□ 0.35
SUPT4H1-203ENST00000579289 FMN2Q9NZ56 1722 aa17.21■□□□□ 0.35
SUPT4H1-203ENST00000579289 NRAPQ86VF7 1730 aa17.19■□□□□ 0.34
SUPT4H1-203ENST00000579289 LRPPRCP42704 1394 aaKnown RBP17.19■□□□□ 0.34
SUPT4H1-203ENST00000579289 NUTM2FA1L443 756 aa17.19■□□□□ 0.34
SUPT4H1-203ENST00000579289 KRT27Q7Z3Y8 459 aa17.19■□□□□ 0.34
SUPT4H1-203ENST00000579289 ADGRF5Q8IZF2 1346 aa17.19■□□□□ 0.34
SUPT4H1-203ENST00000579289 CABLES1Q8TDN4 633 aa17.18■□□□□ 0.34
SUPT4H1-203ENST00000579289 ABCC11Q96J66 1382 aa17.17■□□□□ 0.34
SUPT4H1-203ENST00000579289 KIF1AQ12756 1690 aa17.17■□□□□ 0.34
SUPT4H1-203ENST00000579289 DISP2A7MBM2 1401 aa17.17■□□□□ 0.34
SUPT4H1-203ENST00000579289 KRT28Q7Z3Y7 464 aa17.17■□□□□ 0.34
SUPT4H1-203ENST00000579289 KNDC1Q76NI1 1749 aa17.16■□□□□ 0.34
SUPT4H1-203ENST00000579289 CCDC144AA2RUR9 1427 aa17.16■□□□□ 0.34
SUPT4H1-203ENST00000579289 TNS3Q68CZ2 1445 aa17.16■□□□□ 0.34
SUPT4H1-203ENST00000579289 FAM83GA6ND36 823 aa17.16■□□□□ 0.34
SUPT4H1-203ENST00000579289 RGPD8O14715 1765 aaPredicted RBP17.15■□□□□ 0.34
SUPT4H1-203ENST00000579289 EN1Q05925 392 aaPredicted RBP17.15■□□□□ 0.34
SUPT4H1-203ENST00000579289 TNS1Q9HBL0 1735 aaKnown RBP17.15■□□□□ 0.34
SUPT4H1-203ENST00000579289 ITGAEP38570 1179 aa17.14■□□□□ 0.33
SUPT4H1-203ENST00000579289 SF3B2Q13435 895 aaKnown RBP17.13■□□□□ 0.33
SUPT4H1-203ENST00000579289 SBNO1A3KN83 1393 aa17.13■□□□□ 0.33
SUPT4H1-203ENST00000579289 IFT172Q9UG01 1749 aa17.13■□□□□ 0.33
SUPT4H1-203ENST00000579289 SPATA31E1Q6ZUB1 1445 aa17.13■□□□□ 0.33
SUPT4H1-203ENST00000579289 NRXN1Q9ULB1 1477 aa17.12■□□□□ 0.33
SUPT4H1-203ENST00000579289 R3HDM1Q15032 1099 aaKnown RBP17.12■□□□□ 0.33
SUPT4H1-203ENST00000579289 THSD7AQ9UPZ6 1657 aa17.12■□□□□ 0.33
SUPT4H1-203ENST00000579289 RGPD1P0DJD0 1748 aa17.11■□□□□ 0.33
SUPT4H1-203ENST00000579289 BAG6P46379 1132 aa17.11■□□□□ 0.33
SUPT4H1-203ENST00000579289 TMEM132EQ6IEE7 984 aa17.11■□□□□ 0.33
SUPT4H1-203ENST00000579289 FAM182BQ5T319 152 aa17.1■□□□□ 0.33
SUPT4H1-203ENST00000579289 SIRT1Q96EB6 747 aa17.1■□□□□ 0.33
SUPT4H1-203ENST00000579289 STK26Q9P289 416 aa17.1■□□□□ 0.33
SUPT4H1-203ENST00000579289 RRBP1Q9P2E9 1410 aaKnown RBP17.1■□□□□ 0.33
SUPT4H1-203ENST00000579289 FAM98CQ17RN3 349 aaKnown RBP17.09■□□□□ 0.33
SUPT4H1-203ENST00000579289 CAMKK2Q96RR4 588 aa17.09■□□□□ 0.33
SUPT4H1-203ENST00000579289 PIK3C2GO75747 1445 aa17.09■□□□□ 0.33
SUPT4H1-203ENST00000579289 TRPM3Q9HCF6 1732 aaPredicted RBP17.09■□□□□ 0.33
SUPT4H1-203ENST00000579289 PHF8Q9UPP1 1060 aa17.08■□□□□ 0.32
SUPT4H1-203ENST00000579289 CRYBG1Q9Y4K1 1723 aa17.07■□□□□ 0.32
SUPT4H1-203ENST00000579289 YTHDC2Q9H6S0 1430 aaKnown RBP17.07■□□□□ 0.32
SUPT4H1-203ENST00000579289 EZH2Q15910 746 aaKnown RBP17.07■□□□□ 0.32
SUPT4H1-203ENST00000579289 SPATA31A5Q5VU36 1347 aa17.06■□□□□ 0.32
SUPT4H1-203ENST00000579289 SPATA31A7Q8IWB4 1347 aa17.06■□□□□ 0.32
SUPT4H1-203ENST00000579289 ALS2Q96Q42 1657 aa17.06■□□□□ 0.32
SUPT4H1-203ENST00000579289 UTRNP46939 3433 aa17.06■□□□□ 0.32
SUPT4H1-203ENST00000579289 BTG4Q9NY30 223 aa17.04■□□□□ 0.32
SUPT4H1-203ENST00000579289 ARHGEF10O15013 1369 aa17.03■□□□□ 0.32
SUPT4H1-203ENST00000579289 COL14A1Q05707 1796 aaKnown RBP17.03■□□□□ 0.32
SUPT4H1-203ENST00000579289 CCDC9Q9Y3X0 531 aaKnown RBP17.03■□□□□ 0.32
SUPT4H1-203ENST00000579289 RREB1Q92766 1687 aa17.03■□□□□ 0.32
SUPT4H1-203ENST00000579289 PSME1Q06323 249 aa17.02■□□□□ 0.32
SUPT4H1-203ENST00000579289 C14orf93Q9H972 538 aaKnown RBP17■□□□□ 0.31
SUPT4H1-203ENST00000579289 ANKRD30BQ9BXX2 1392 aa17■□□□□ 0.31
SUPT4H1-203ENST00000579289 NUP188Q5SRE5 1749 aa16.99■□□□□ 0.31
SUPT4H1-203ENST00000579289 PLEKHG5O94827 1062 aa16.99■□□□□ 0.31
SUPT4H1-203ENST00000579289 SLC4A1APQ9BWU0 796 aaKnown RBP16.99■□□□□ 0.31
SUPT4H1-203ENST00000579289 YY1P25490 414 aa16.98■□□□□ 0.31
SUPT4H1-203ENST00000579289 PRR36Q9H6K5 1346 aa16.97■□□□□ 0.31
SUPT4H1-203ENST00000579289 ANKARQ7Z5J8 1434 aa16.97■□□□□ 0.31
SUPT4H1-203ENST00000579289 HAP1P54257 671 aaPredicted RBP16.97■□□□□ 0.31
SUPT4H1-203ENST00000579289 RGL3Q3MIN7 710 aa16.97■□□□□ 0.31
SUPT4H1-203ENST00000579289 PPARGC1BQ86YN6 1023 aaKnown RBP16.97■□□□□ 0.31
SUPT4H1-203ENST00000579289 PMFBP1Q8TBY8 1022 aa16.97■□□□□ 0.31
SUPT4H1-203ENST00000579289 ADGRB2O60241 1585 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms