RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 NALCNQ8IZF0 1738 aa11.38□□□□□ -0.59
CDK5RAP3-209ENST00000578663 SHANK3Q9BYB0 1731 aa11.38□□□□□ -0.59
CDK5RAP3-209ENST00000578663 GCC2Q8IWJ2 1684 aa11.37□□□□□ -0.59
CDK5RAP3-209ENST00000578663 DAPK1P53355 1430 aa11.37□□□□□ -0.59
CDK5RAP3-209ENST00000578663 ADAMTS13Q76LX8 1427 aa11.37□□□□□ -0.59
CDK5RAP3-209ENST00000578663 CAPN15O75808 1086 aa11.37□□□□□ -0.59
CDK5RAP3-209ENST00000578663 EZH2Q15910 746 aaKnown RBP11.37□□□□□ -0.59
CDK5RAP3-209ENST00000578663 KRT27Q7Z3Y8 459 aa11.37□□□□□ -0.59
CDK5RAP3-209ENST00000578663 BCANQ96GW7 911 aa11.37□□□□□ -0.59
CDK5RAP3-209ENST00000578663 PPP1R1BQ9UD71 204 aaPredicted RBP11.37□□□□□ -0.59
CDK5RAP3-209ENST00000578663 SOS2Q07890 1332 aaPredicted RBP11.36□□□□□ -0.59
CDK5RAP3-209ENST00000578663 PTPN23Q9H3S7 1636 aa11.36□□□□□ -0.59
CDK5RAP3-209ENST00000578663 XRN1Q8IZH2 1706 aaKnown RBP11.36□□□□□ -0.59
CDK5RAP3-209ENST00000578663 RRP7BPQ9NSQ0 103 aa11.36□□□□□ -0.59
CDK5RAP3-209ENST00000578663 ANKRD30AQ9BXX3 1397 aa11.36□□□□□ -0.59
CDK5RAP3-209ENST00000578663 NRKQ7Z2Y5 1582 aa11.36□□□□□ -0.59
CDK5RAP3-209ENST00000578663 MYOM1P52179 1685 aa11.36□□□□□ -0.59
CDK5RAP3-209ENST00000578663 PTPRUQ92729 1446 aa11.35□□□□□ -0.59
CDK5RAP3-209ENST00000578663 ONECUT3O60422 494 aaPredicted RBP11.35□□□□□ -0.59
CDK5RAP3-209ENST00000578663 PPP1R15AO75807 674 aaPredicted RBP11.35□□□□□ -0.59
CDK5RAP3-209ENST00000578663 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.35□□□□□ -0.59
CDK5RAP3-209ENST00000578663 UNC5CLQ8IV45 518 aa11.34□□□□□ -0.59
CDK5RAP3-209ENST00000578663 SPON1Q9HCB6 807 aa11.34□□□□□ -0.59
CDK5RAP3-209ENST00000578663 PLCH1Q4KWH8 1693 aa11.33□□□□□ -0.6
CDK5RAP3-209ENST00000578663 ADGRL2O95490 1459 aa11.33□□□□□ -0.6
CDK5RAP3-209ENST00000578663 CASZ1Q86V15 1759 aa11.33□□□□□ -0.6
CDK5RAP3-209ENST00000578663 KCNQ2O43526 872 aa11.32□□□□□ -0.6
CDK5RAP3-209ENST00000578663 CAMKK2Q96RR4 588 aa11.32□□□□□ -0.6
CDK5RAP3-209ENST00000578663 NWD2Q9ULI1 1742 aa11.32□□□□□ -0.6
CDK5RAP3-209ENST00000578663 PRELPP51888 382 aa11.31□□□□□ -0.6
CDK5RAP3-209ENST00000578663 ADGRB2O60241 1585 aa11.31□□□□□ -0.6
CDK5RAP3-209ENST00000578663 KANK4Q5T7N3 995 aaPredicted RBP11.3□□□□□ -0.6
CDK5RAP3-209ENST00000578663 C1orf167Q5SNV9 1468 aa11.3□□□□□ -0.6
CDK5RAP3-209ENST00000578663 USP32Q8NFA0 1604 aa11.28□□□□□ -0.6
CDK5RAP3-209ENST00000578663 COL13A1Q5TAT6 717 aaPredicted RBP11.28□□□□□ -0.6
CDK5RAP3-209ENST00000578663 AMOTL2Q9Y2J4 779 aa11.28□□□□□ -0.6
CDK5RAP3-209ENST00000578663 ADGRL3Q9HAR2 1447 aa11.27□□□□□ -0.6
CDK5RAP3-209ENST00000578663 ANKRD50Q9ULJ7 1429 aa11.27□□□□□ -0.6
CDK5RAP3-209ENST00000578663 FAM182BQ5T319 152 aa11.27□□□□□ -0.61
CDK5RAP3-209ENST00000578663 HSPA6P17066 643 aa11.26□□□□□ -0.61
CDK5RAP3-209ENST00000578663 VPS72Q15906 364 aa11.26□□□□□ -0.61
CDK5RAP3-209ENST00000578663 IQGAP3Q86VI3 1631 aa11.26□□□□□ -0.61
CDK5RAP3-209ENST00000578663 NRXN3Q9Y4C0 1643 aa11.26□□□□□ -0.61
CDK5RAP3-209ENST00000578663 NRAPQ86VF7 1730 aa11.26□□□□□ -0.61
CDK5RAP3-209ENST00000578663 PXDNQ92626 1479 aa11.25□□□□□ -0.61
CDK5RAP3-209ENST00000578663 E9PCH4 1651 aa11.24□□□□□ -0.61
CDK5RAP3-209ENST00000578663 ORAI2Q96SN7 254 aa11.24□□□□□ -0.61
CDK5RAP3-209ENST00000578663 PARD3Q8TEW0 1356 aa11.24□□□□□ -0.61
CDK5RAP3-209ENST00000578663 THSD7AQ9UPZ6 1657 aa11.24□□□□□ -0.61
CDK5RAP3-209ENST00000578663 GOLGB1Q14789 3259 aaKnown RBP11.23□□□□□ -0.61
CDK5RAP3-209ENST00000578663 CHIC2Q9UKJ5 165 aa11.23□□□□□ -0.61
CDK5RAP3-209ENST00000578663 ABCA3Q99758 1704 aa11.22□□□□□ -0.61
CDK5RAP3-209ENST00000578663 CHGAP10645 457 aaKnown RBP11.21□□□□□ -0.61
CDK5RAP3-209ENST00000578663 SYT17Q9BSW7 474 aa11.21□□□□□ -0.61
CDK5RAP3-209ENST00000578663 DLC1Q96QB1 1528 aa11.2□□□□□ -0.62
CDK5RAP3-209ENST00000578663 PRAG1Q86YV5 1406 aa11.2□□□□□ -0.62
CDK5RAP3-209ENST00000578663 PTGER2P43116 358 aa11.19□□□□□ -0.62
CDK5RAP3-209ENST00000578663 METP08581 1390 aa11.18□□□□□ -0.62
CDK5RAP3-209ENST00000578663 TRIM37O94972 964 aa11.18□□□□□ -0.62
CDK5RAP3-209ENST00000578663 FAM98CQ17RN3 349 aaKnown RBP11.18□□□□□ -0.62
CDK5RAP3-209ENST00000578663 NBPF8Q3BBV2 869 aa11.18□□□□□ -0.62
CDK5RAP3-209ENST00000578663 NBPF14Q5TI25 921 aa11.18□□□□□ -0.62
CDK5RAP3-209ENST00000578663 TNS4Q8IZW8 715 aa11.18□□□□□ -0.62
CDK5RAP3-209ENST00000578663 FHDC1Q9C0D6 1143 aaPredicted RBP11.18□□□□□ -0.62
CDK5RAP3-209ENST00000578663 A0A0G2JS52 829 aa11.17□□□□□ -0.62
CDK5RAP3-209ENST00000578663 MYT1Q01538 1121 aa11.17□□□□□ -0.62
CDK5RAP3-209ENST00000578663 CCDC9Q9Y3X0 531 aaKnown RBP11.17□□□□□ -0.62
CDK5RAP3-209ENST00000578663 FAM83GA6ND36 823 aa11.16□□□□□ -0.62
CDK5RAP3-209ENST00000578663 APBA3O96018 575 aa11.16□□□□□ -0.62
CDK5RAP3-209ENST00000578663 DNAJC5GQ8N7S2 189 aa11.16□□□□□ -0.62
CDK5RAP3-209ENST00000578663 PDGFDQ9GZP0 370 aaPredicted RBP11.16□□□□□ -0.62
CDK5RAP3-209ENST00000578663 PCNTO95613 3336 aa11.16□□□□□ -0.62
CDK5RAP3-209ENST00000578663 ROCK1Q13464 1354 aa11.15□□□□□ -0.63
CDK5RAP3-209ENST00000578663 NEXMIFQ5QGS0 1516 aa11.14□□□□□ -0.63
CDK5RAP3-209ENST00000578663 RGPD3A6NKT7 1758 aaPredicted RBP11.14□□□□□ -0.63
CDK5RAP3-209ENST00000578663 RGPD4Q7Z3J3 1758 aa11.14□□□□□ -0.63
CDK5RAP3-209ENST00000578663 APLP2Q06481 763 aa11.14□□□□□ -0.63
CDK5RAP3-209ENST00000578663 CDC42BPGQ6DT37 1551 aa11.13□□□□□ -0.63
CDK5RAP3-209ENST00000578663 XPCQ01831 940 aaPredicted RBP11.13□□□□□ -0.63
CDK5RAP3-209ENST00000578663 NPHP3Q7Z494 1330 aa11.12□□□□□ -0.63
CDK5RAP3-209ENST00000578663 ZBTB7AO95365 584 aa11.12□□□□□ -0.63
CDK5RAP3-209ENST00000578663 HFM1A2PYH4 1435 aa11.11□□□□□ -0.63
CDK5RAP3-209ENST00000578663 ANO8Q9HCE9 1232 aaPredicted RBP11.11□□□□□ -0.63
CDK5RAP3-209ENST00000578663 WDR90Q96KV7 1748 aa11.11□□□□□ -0.63
CDK5RAP3-209ENST00000578663 ATP10DQ9P241 1426 aa11.1□□□□□ -0.63
CDK5RAP3-209ENST00000578663 SGIP1Q9BQI5 828 aa11.1□□□□□ -0.63
CDK5RAP3-209ENST00000578663 NUP155O75694 1391 aa11.1□□□□□ -0.63
CDK5RAP3-209ENST00000578663 ROBO2Q9HCK4 1378 aa11.1□□□□□ -0.63
CDK5RAP3-209ENST00000578663 FAM50AQ14320 339 aaKnown RBP11.09□□□□□ -0.63
CDK5RAP3-209ENST00000578663 ATF5Q9Y2D1 282 aaPredicted RBP11.09□□□□□ -0.63
CDK5RAP3-209ENST00000578663 SBF2Q86WG5 1849 aa11.09□□□□□ -0.63
CDK5RAP3-209ENST00000578663 LRPPRCP42704 1394 aaKnown RBP11.08□□□□□ -0.64
CDK5RAP3-209ENST00000578663 MAP3K5Q99683 1374 aa11.08□□□□□ -0.64
CDK5RAP3-209ENST00000578663 ZNF326Q5BKZ1 582 aaKnown RBP11.08□□□□□ -0.64
CDK5RAP3-209ENST00000578663 CLTCL1P53675 1640 aa11.08□□□□□ -0.64
CDK5RAP3-209ENST00000578663 SPATA31A3Q5VYP0 1347 aa11.08□□□□□ -0.64
CDK5RAP3-209ENST00000578663 FOXO3O43524 673 aa11.07□□□□□ -0.64
CDK5RAP3-209ENST00000578663 FAM196AQ6ZSG2 479 aa11.07□□□□□ -0.64
CDK5RAP3-209ENST00000578663 GPR162Q16538 588 aa11.06□□□□□ -0.64
CDK5RAP3-209ENST00000578663 COL14A1Q05707 1796 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms