RNA–Protein interactions for RNA: ENST00000578218.5

THRA-208, Transcript of thyroid hormone receptor alpha, humanhuman

TSL 4

Gene THRA, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THRA-208ENST00000578218 MPHOSPH9Q99550 1183 aa37.22■■■■□ 3.55
THRA-208ENST00000578218 COL22A1Q8NFW1 1626 aaPredicted RBP37.21■■■■□ 3.55
THRA-208ENST00000578218 TECPR2O15040 1411 aa37.19■■■■□ 3.54
THRA-208ENST00000578218 ADAMTS2O95450 1211 aa37.18■■■■□ 3.54
THRA-208ENST00000578218 PIK3C2GO75747 1445 aa37.18■■■■□ 3.54
THRA-208ENST00000578218 UPF1Q92900 1129 aaKnown RBP eCLIP37.16■■■■□ 3.542e-6■■■■□ 22.2
THRA-208ENST00000578218 STK26Q9P289 416 aa37.16■■■■□ 3.54
THRA-208ENST00000578218 LRPPRCP42704 1394 aaKnown RBP37.16■■■■□ 3.54
THRA-208ENST00000578218 RGS12O14924 1447 aa37.15■■■■□ 3.54
THRA-208ENST00000578218 NGLY1Q96IV0 654 aa37.13■■■■□ 3.53
THRA-208ENST00000578218 NPHP3Q7Z494 1330 aa37.12■■■■□ 3.53
THRA-208ENST00000578218 ESCO1Q5FWF5 840 aa37.12■■■■□ 3.53
THRA-208ENST00000578218 FMN2Q9NZ56 1722 aa37.11■■■■□ 3.53
THRA-208ENST00000578218 QTRT2Q9H974 415 aaKnown RBP37.11■■■■□ 3.53
THRA-208ENST00000578218 PXDNQ92626 1479 aa37.1■■■■□ 3.53
THRA-208ENST00000578218 RBM6P78332 1123 aaKnown RBP37.1■■■■□ 3.53
THRA-208ENST00000578218 MARF1Q9Y4F3 1742 aaKnown RBP37.07■■■■□ 3.53
THRA-208ENST00000578218 ABCC11Q96J66 1382 aa37.07■■■■□ 3.53
THRA-208ENST00000578218 KIF1AQ12756 1690 aa37.07■■■■□ 3.52
THRA-208ENST00000578218 WAPLQ7Z5K2 1190 aa37.07■■■■□ 3.52
THRA-208ENST00000578218 TMEM132EQ6IEE7 984 aa37.06■■■■□ 3.52
THRA-208ENST00000578218 YTHDC2Q9H6S0 1430 aaKnown RBP37.06■■■■□ 3.52
THRA-208ENST00000578218 ACIN1Q9UKV3 1341 aaKnown RBP37.06■■■■□ 3.52
THRA-208ENST00000578218 PLEKHH1Q9ULM0 1364 aa37.05■■■■□ 3.52
THRA-208ENST00000578218 MYOM2P54296 1465 aa37.05■■■■□ 3.52
THRA-208ENST00000578218 NUTM2FA1L443 756 aa37.03■■■■□ 3.52
THRA-208ENST00000578218 USP21Q9UK80 565 aa37.02■■■■□ 3.52
THRA-208ENST00000578218 XPCQ01831 940 aaPredicted RBP37■■■■□ 3.51
THRA-208ENST00000578218 FOXO3O43524 673 aa36.99■■■■□ 3.51
THRA-208ENST00000578218 NRXN1Q9ULB1 1477 aa36.98■■■■□ 3.51
THRA-208ENST00000578218 TRPC5Q9UL62 973 aaPredicted RBP36.96■■■■□ 3.51
THRA-208ENST00000578218 RGPD8O14715 1765 aaPredicted RBP36.94■■■■□ 3.5
THRA-208ENST00000578218 ATRNO75882 1429 aa36.93■■■■□ 3.5
THRA-208ENST00000578218 RAB3GAP2Q9H2M9 1393 aa36.92■■■■□ 3.5
THRA-208ENST00000578218 FNBP4Q8N3X1 1017 aaPredicted RBP36.92■■■■□ 3.5
THRA-208ENST00000578218 DHX57Q6P158 1386 aaKnown RBP36.91■■■■□ 3.5
THRA-208ENST00000578218 C14orf93Q9H972 538 aaKnown RBP36.89■■■■□ 3.5
THRA-208ENST00000578218 TNKS1BP1Q9C0C2 1729 aaKnown RBP36.88■■■■□ 3.49
THRA-208ENST00000578218 ATAD2Q6PL18 1390 aa36.88■■■■□ 3.49
THRA-208ENST00000578218 CFAP70Q5T0N1 1121 aa36.87■■■■□ 3.49
THRA-208ENST00000578218 SIRT1Q96EB6 747 aa36.85■■■■□ 3.49
THRA-208ENST00000578218 USP32Q8NFA0 1604 aa36.85■■■■□ 3.49
THRA-208ENST00000578218 DLC1Q96QB1 1528 aa36.84■■■■□ 3.49
THRA-208ENST00000578218 BCL9LQ86UU0 1499 aa36.83■■■■□ 3.49
THRA-208ENST00000578218 SPATA31A3Q5VYP0 1347 aa36.82■■■■□ 3.48
THRA-208ENST00000578218 TNS3Q68CZ2 1445 aa36.8■■■■□ 3.48
THRA-208ENST00000578218 SAFB2Q14151 953 aaKnown RBP eCLIP36.8■■■■□ 3.48
THRA-208ENST00000578218 ADGRB2O60241 1585 aa36.79■■■■□ 3.48
THRA-208ENST00000578218 PRAM1Q96QH2 718 aa36.79■■■■□ 3.48
THRA-208ENST00000578218 ABCA3Q99758 1704 aa36.78■■■■□ 3.48
THRA-208ENST00000578218 KRT28Q7Z3Y7 464 aa36.77■■■■□ 3.48
THRA-208ENST00000578218 PHF8Q9UPP1 1060 aa36.77■■■■□ 3.48
THRA-208ENST00000578218 ADGRB1O14514 1584 aa36.76■■■■□ 3.48
THRA-208ENST00000578218 POGKQ9P215 609 aa36.74■■■■□ 3.47
THRA-208ENST00000578218 HAP1P54257 671 aaPredicted RBP36.73■■■■□ 3.47
THRA-208ENST00000578218 SLIT2O94813 1529 aa36.73■■■■□ 3.47
THRA-208ENST00000578218 PLCH1Q4KWH8 1693 aa36.72■■■■□ 3.47
THRA-208ENST00000578218 ANKARQ7Z5J8 1434 aa36.71■■■■□ 3.47
THRA-208ENST00000578218 PSME1Q06323 249 aa36.71■■■■□ 3.47
THRA-208ENST00000578218 GLI3P10071 1580 aa36.7■■■■□ 3.46
THRA-208ENST00000578218 GJD4Q96KN9 370 aaPredicted RBP36.69■■■■□ 3.46
THRA-208ENST00000578218 EP400Q96L91 3159 aa36.68■■■■□ 3.46
THRA-208ENST00000578218 SBNO1A3KN83 1393 aa36.67■■■■□ 3.46
THRA-208ENST00000578218 NWD2Q9ULI1 1742 aa36.67■■■■□ 3.46
THRA-208ENST00000578218 RALGAPBQ86X10 1494 aa36.67■■■■□ 3.46
THRA-208ENST00000578218 UNC5CLQ8IV45 518 aa36.66■■■■□ 3.46
THRA-208ENST00000578218 ARHGEF10O15013 1369 aa36.66■■■■□ 3.46
THRA-208ENST00000578218 PLEKHG5O94827 1062 aa36.65■■■■□ 3.46
THRA-208ENST00000578218 LMOD2Q6P5Q4 547 aa36.65■■■■□ 3.46
THRA-208ENST00000578218 TRAK1Q9UPV9 953 aa36.64■■■■□ 3.46
THRA-208ENST00000578218 TRPM3Q9HCF6 1732 aaPredicted RBP36.63■■■■□ 3.45
THRA-208ENST00000578218 EIF3AQ14152 1382 aaKnown RBP36.63■■■■□ 3.45
THRA-208ENST00000578218 KDM2AQ9Y2K7 1162 aa36.62■■■■□ 3.45
THRA-208ENST00000578218 TULP4Q9NRJ4 1543 aa36.61■■■■□ 3.45
THRA-208ENST00000578218 PMFBP1Q8TBY8 1022 aa36.61■■■■□ 3.45
THRA-208ENST00000578218 DCAF11Q8TEB1 546 aa36.61■■■■□ 3.45
THRA-208ENST00000578218 ARHGEF28Q8N1W1 1705 aaKnown RBP36.6■■■■□ 3.45
THRA-208ENST00000578218 CABLES1Q8TDN4 633 aa36.6■■■■□ 3.45
THRA-208ENST00000578218 HIRIP3Q9BW71 556 aaPredicted RBP36.6■■■■□ 3.45
THRA-208ENST00000578218 BRWD3Q6RI45 1802 aa36.59■■■■□ 3.45
THRA-208ENST00000578218 MINK1Q8N4C8 1332 aaPredicted RBP36.58■■■■□ 3.45
THRA-208ENST00000578218 ALS2Q96Q42 1657 aa36.56■■■■□ 3.44
THRA-208ENST00000578218 ITSN1Q15811 1721 aa36.56■■■■□ 3.44
THRA-208ENST00000578218 GPRASP1Q5JY77 1395 aa36.53■■■■□ 3.44
THRA-208ENST00000578218 NRAPQ86VF7 1730 aa36.52■■■■□ 3.44
THRA-208ENST00000578218 STAC3Q96MF2 364 aa36.5■■■■□ 3.43
THRA-208ENST00000578218 CCDC9Q9Y3X0 531 aaKnown RBP36.5■■■■□ 3.43
THRA-208ENST00000578218 CCDC125Q86Z20 511 aa36.49■■■■□ 3.43
THRA-208ENST00000578218 PRR36Q9H6K5 1346 aa36.49■■■■□ 3.43
THRA-208ENST00000578218 VPS72Q15906 364 aa36.48■■■■□ 3.43
THRA-208ENST00000578218 COL14A1Q05707 1796 aaKnown RBP36.47■■■■□ 3.43
THRA-208ENST00000578218 WASLO00401 505 aaPredicted RBP36.46■■■■□ 3.43
THRA-208ENST00000578218 CRYBG1Q9Y4K1 1723 aa36.45■■■■□ 3.43
THRA-208ENST00000578218 HRCP23327 699 aa36.45■■■■□ 3.43
THRA-208ENST00000578218 BLMP54132 1417 aaPredicted RBP36.44■■■■□ 3.42
THRA-208ENST00000578218 ATP7BP35670 1465 aa36.43■■■■□ 3.42
THRA-208ENST00000578218 SEPT12Q8IYM1 358 aa36.42■■■■□ 3.42
THRA-208ENST00000578218 ZRANB1Q9UGI0 708 aa36.42■■■■□ 3.42
THRA-208ENST00000578218 NGDNQ8NEJ9 315 aaKnown RBP36.41■■■■□ 3.42
THRA-208ENST00000578218 KIAA1210Q9ULL0 1709 aa36.41■■■■□ 3.42
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms