RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 AK7Q96M32 723 aa12.96□□□□□ -0.33
SEC22B-201ENST00000578049 VPS37CA5D8V6 355 aaPredicted RBP12.96□□□□□ -0.33
SEC22B-201ENST00000578049 GNAI3P08754 354 aa12.96□□□□□ -0.33
SEC22B-201ENST00000578049 ZNF428Q96B54 188 aa12.96□□□□□ -0.34
SEC22B-201ENST00000578049 C1orf141Q5JVX7 400 aa12.95□□□□□ -0.34
SEC22B-201ENST00000578049 TMX4Q9H1E5 349 aaPredicted RBP12.95□□□□□ -0.34
SEC22B-201ENST00000578049 G3BP1Q13283 466 aaKnown RBP eCLIP12.95□□□□□ -0.34
SEC22B-201ENST00000578049 PTPRGP23470 1445 aa12.95□□□□□ -0.34
SEC22B-201ENST00000578049 FRAT2O75474 233 aaPredicted RBP12.95□□□□□ -0.34
SEC22B-201ENST00000578049 PES1O00541 588 aaKnown RBP12.95□□□□□ -0.34
SEC22B-201ENST00000578049 TSPY26PQ9H489 355 aa12.95□□□□□ -0.34
SEC22B-201ENST00000578049 MARCH6O60337 910 aa12.94□□□□□ -0.34
SEC22B-201ENST00000578049 CREBRFQ8IUR6 639 aa12.94□□□□□ -0.34
SEC22B-201ENST00000578049 HIP1O00291 1037 aa12.94□□□□□ -0.34
SEC22B-201ENST00000578049 SAFBQ15424 915 aaKnown RBP eCLIP12.94□□□□□ -0.34
SEC22B-201ENST00000578049 PNISRQ8TF01 805 aaKnown RBP12.94□□□□□ -0.34
SEC22B-201ENST00000578049 ADAMTS8Q9UP79 889 aa12.94□□□□□ -0.34
SEC22B-201ENST00000578049 NCOA2Q15596 1464 aa12.94□□□□□ -0.34
SEC22B-201ENST00000578049 PANK1Q8TE04 598 aa12.93□□□□□ -0.34
SEC22B-201ENST00000578049 FKBP5Q13451 457 aaPredicted RBP12.93□□□□□ -0.34
SEC22B-201ENST00000578049 RUFY1Q96T51 708 aa12.93□□□□□ -0.34
SEC22B-201ENST00000578049 FANCD2Q9BXW9 1451 aa12.93□□□□□ -0.34
SEC22B-201ENST00000578049 ZNF330Q9Y3S2 320 aaPredicted RBP12.93□□□□□ -0.34
SEC22B-201ENST00000578049 PDZRN3Q9UPQ7 1066 aa12.92□□□□□ -0.34
SEC22B-201ENST00000578049 WDR63Q8IWG1 891 aa12.92□□□□□ -0.34
SEC22B-201ENST00000578049 FOXD4L6Q3SYB3 417 aaPredicted RBP12.92□□□□□ -0.34
SEC22B-201ENST00000578049 FOXD4L3Q6VB84 417 aaPredicted RBP12.92□□□□□ -0.34
SEC22B-201ENST00000578049 TCP11L2Q8N4U5 519 aa12.91□□□□□ -0.34
SEC22B-201ENST00000578049 PPP2R1AP30153 589 aa12.91□□□□□ -0.34
SEC22B-201ENST00000578049 PDCL2Q8N4E4 241 aa12.91□□□□□ -0.34
SEC22B-201ENST00000578049 BRPF3Q9ULD4 1205 aa12.91□□□□□ -0.34
SEC22B-201ENST00000578049 OLFM4Q6UX06 510 aa12.91□□□□□ -0.34
SEC22B-201ENST00000578049 GRPEL1Q9HAV7 217 aa12.91□□□□□ -0.34
SEC22B-201ENST00000578049 ESPNB1AK53 854 aa12.91□□□□□ -0.34
SEC22B-201ENST00000578049 CNTROBQ8N137 903 aa12.9□□□□□ -0.34
SEC22B-201ENST00000578049 EFCAB5A4FU69 1503 aa12.9□□□□□ -0.34
SEC22B-201ENST00000578049 PIP4K2AP48426 406 aaPredicted RBP12.9□□□□□ -0.34
SEC22B-201ENST00000578049 AEBP1Q8IUX7 1158 aa12.9□□□□□ -0.34
SEC22B-201ENST00000578049 WDR33Q9C0J8 1336 aaKnown RBP12.9□□□□□ -0.34
SEC22B-201ENST00000578049 SDF4Q9BRK5 362 aa12.9□□□□□ -0.34
SEC22B-201ENST00000578049 AMOTL1Q8IY63 956 aa12.9□□□□□ -0.35
SEC22B-201ENST00000578049 KINO60870 393 aaKnown RBP12.89□□□□□ -0.35
SEC22B-201ENST00000578049 MCM4P33991 863 aa12.89□□□□□ -0.35
SEC22B-201ENST00000578049 TRIM5Q9C035 493 aa12.89□□□□□ -0.35
SEC22B-201ENST00000578049 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.89□□□□□ -0.35
SEC22B-201ENST00000578049 K7ELQ4 463 aaPredicted RBP12.89□□□□□ -0.35
SEC22B-201ENST00000578049 DCTN1Q14203 1278 aa12.89□□□□□ -0.35
SEC22B-201ENST00000578049 TTC5Q8N0Z6 440 aa12.88□□□□□ -0.35
SEC22B-201ENST00000578049 CLASRPQ8N2M8 674 aaKnown RBP12.88□□□□□ -0.35
SEC22B-201ENST00000578049 GAPVD1Q14C86 1478 aa12.88□□□□□ -0.35
SEC22B-201ENST00000578049 PLEKHH2Q8IVE3 1493 aa12.88□□□□□ -0.35
SEC22B-201ENST00000578049 CCDC192P0DO97 292 aa12.88□□□□□ -0.35
SEC22B-201ENST00000578049 RALYLQ86SE5 291 aaKnown RBP12.88□□□□□ -0.35
SEC22B-201ENST00000578049 KIAA1107Q9UPP5 1409 aa12.88□□□□□ -0.35
SEC22B-201ENST00000578049 UBTFL1P0CB47 393 aaPredicted RBP12.88□□□□□ -0.35
SEC22B-201ENST00000578049 CALRP27797 417 aaKnown RBP12.88□□□□□ -0.35
SEC22B-201ENST00000578049 IL27Q8NEV9 243 aa12.88□□□□□ -0.35
SEC22B-201ENST00000578049 FGD5Q6ZNL6 1462 aa12.88□□□□□ -0.35
SEC22B-201ENST00000578049 NEK4P51957 841 aa12.88□□□□□ -0.35
SEC22B-201ENST00000578049 TAF3Q5VWG9 929 aa12.88□□□□□ -0.35
SEC22B-201ENST00000578049 DHX16O60231 1041 aaKnown RBP12.87□□□□□ -0.35
SEC22B-201ENST00000578049 ANKRD1Q15327 319 aa12.87□□□□□ -0.35
SEC22B-201ENST00000578049 ERC1Q8IUD2 1116 aa12.87□□□□□ -0.35
SEC22B-201ENST00000578049 ZNF396Q96N95 335 aaPredicted RBP12.87□□□□□ -0.35
SEC22B-201ENST00000578049 ERICH2A1L162 156 aa12.87□□□□□ -0.35
SEC22B-201ENST00000578049 TSPYL4Q9UJ04 414 aa12.87□□□□□ -0.35
SEC22B-201ENST00000578049 MINK1Q8N4C8 1332 aaPredicted RBP12.87□□□□□ -0.35
SEC22B-201ENST00000578049 ZSCAN30Q86W11 494 aa12.86□□□□□ -0.35
SEC22B-201ENST00000578049 JMYQ8N9B5 988 aa12.86□□□□□ -0.35
SEC22B-201ENST00000578049 PCMTD1Q96MG8 357 aaPredicted RBP12.86□□□□□ -0.35
SEC22B-201ENST00000578049 XBP1P17861 261 aa12.86□□□□□ -0.35
SEC22B-201ENST00000578049 RNF214Q8ND24 703 aa12.86□□□□□ -0.35
SEC22B-201ENST00000578049 CDCA7LQ96GN5 454 aa12.86□□□□□ -0.35
SEC22B-201ENST00000578049 PRPF40AO75400 957 aaKnown RBP12.86□□□□□ -0.35
SEC22B-201ENST00000578049 PKNOX2Q96KN3 472 aa12.86□□□□□ -0.35
SEC22B-201ENST00000578049 SRCIN1Q9C0H9 1055 aa12.86□□□□□ -0.35
SEC22B-201ENST00000578049 LTV1Q96GA3 475 aaPredicted RBP12.85□□□□□ -0.35
SEC22B-201ENST00000578049 AKNAQ7Z591 1439 aa12.85□□□□□ -0.35
SEC22B-201ENST00000578049 KIF2AO00139 706 aaPredicted RBP12.85□□□□□ -0.35
SEC22B-201ENST00000578049 SMARCE1Q969G3 411 aa12.85□□□□□ -0.35
SEC22B-201ENST00000578049 MYO6Q9UM54 1294 aa12.85□□□□□ -0.35
SEC22B-201ENST00000578049 CCDC112Q8NEF3 446 aa12.85□□□□□ -0.35
SEC22B-201ENST00000578049 BRMS1Q9HCU9 246 aa12.85□□□□□ -0.35
SEC22B-201ENST00000578049 ARAP1Q96P48 1450 aa12.85□□□□□ -0.35
SEC22B-201ENST00000578049 EHBP1L1Q8N3D4 1523 aa12.84□□□□□ -0.35
SEC22B-201ENST00000578049 MTHFSP49914 203 aa12.84□□□□□ -0.35
SEC22B-201ENST00000578049 GTF2E1P29083 439 aaPredicted RBP12.84□□□□□ -0.35
SEC22B-201ENST00000578049 MVPQ14764 893 aaKnown RBP12.84□□□□□ -0.35
SEC22B-201ENST00000578049 NOL10Q9BSC4 688 aaKnown RBP12.84□□□□□ -0.35
SEC22B-201ENST00000578049 FILIP1LQ4L180 1135 aa12.84□□□□□ -0.35
SEC22B-201ENST00000578049 CCDC30Q5VVM6 783 aa12.84□□□□□ -0.35
SEC22B-201ENST00000578049 GAS2L2Q8NHY3 880 aa12.84□□□□□ -0.35
SEC22B-201ENST00000578049 ATF7IPQ6VMQ6 1270 aa12.83□□□□□ -0.36
SEC22B-201ENST00000578049 LEKR1Q6ZMV7 388 aa12.83□□□□□ -0.36
SEC22B-201ENST00000578049 KRT85P78386 507 aa12.83□□□□□ -0.36
SEC22B-201ENST00000578049 ZSCAN31Q96LW9 406 aaPredicted RBP12.83□□□□□ -0.36
SEC22B-201ENST00000578049 CCT4P50991 539 aaKnown RBP12.83□□□□□ -0.36
SEC22B-201ENST00000578049 EIF2S2P20042 333 aaKnown RBP12.82□□□□□ -0.36
SEC22B-201ENST00000578049 ERLIN1O75477 346 aa12.82□□□□□ -0.36
SEC22B-201ENST00000578049 NFXL1Q6ZNB6 911 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms