RNA–Protein interactions for RNA: ENST00000577840.5

CUEDC1-207, Transcript of CUE domain containing 1, humanhuman

TSL 5 BASIC

Gene CUEDC1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-207ENST00000577840 TECPR2O15040 1411 aa21.49■■□□□ 1.03
CUEDC1-207ENST00000577840 PRAM1Q96QH2 718 aa21.49■■□□□ 1.03
CUEDC1-207ENST00000577840 LRRC7Q96NW7 1537 aa21.49■■□□□ 1.03
CUEDC1-207ENST00000577840 CDCA8Q53HL2 280 aa21.48■■□□□ 1.03
CUEDC1-207ENST00000577840 TESK2Q96S53 571 aa21.48■■□□□ 1.03
CUEDC1-207ENST00000577840 SBNO2Q9Y2G9 1366 aa21.48■■□□□ 1.03
CUEDC1-207ENST00000577840 FAM135BQ49AJ0 1406 aa21.47■■□□□ 1.03
CUEDC1-207ENST00000577840 CHD2O14647 1828 aaKnown RBP21.47■■□□□ 1.03
CUEDC1-207ENST00000577840 PTPRUQ92729 1446 aa21.46■■□□□ 1.03
CUEDC1-207ENST00000577840 SAFB2Q14151 953 aaKnown RBP eCLIP21.45■■□□□ 1.02
CUEDC1-207ENST00000577840 XRN1Q8IZH2 1706 aaKnown RBP21.44■■□□□ 1.02
CUEDC1-207ENST00000577840 KCNA6P17658 529 aa21.44■■□□□ 1.02
CUEDC1-207ENST00000577840 POLR3GLQ9BT43 218 aa21.44■■□□□ 1.02
CUEDC1-207ENST00000577840 PTCH1Q13635 1447 aa21.44■■□□□ 1.02
CUEDC1-207ENST00000577840 WAPLQ7Z5K2 1190 aa21.43■■□□□ 1.02
CUEDC1-207ENST00000577840 CCDC7Q96M83 1385 aa21.43■■□□□ 1.02
CUEDC1-207ENST00000577840 KIF7Q2M1P5 1343 aa21.42■■□□□ 1.02
CUEDC1-207ENST00000577840 EVC2Q86UK5 1308 aa21.42■■□□□ 1.02
CUEDC1-207ENST00000577840 ROBO2Q9HCK4 1378 aa21.42■■□□□ 1.02
CUEDC1-207ENST00000577840 WASHC2AQ641Q2 1341 aa21.41■■□□□ 1.02
CUEDC1-207ENST00000577840 C11orf95C9JLR9 678 aaPredicted RBP21.41■■□□□ 1.02
CUEDC1-207ENST00000577840 POTEAQ6S8J7 498 aa21.41■■□□□ 1.02
CUEDC1-207ENST00000577840 XIRP1Q702N8 1843 aaKnown RBP21.41■■□□□ 1.02
CUEDC1-207ENST00000577840 MINK1Q8N4C8 1332 aaPredicted RBP21.4■■□□□ 1.02
CUEDC1-207ENST00000577840 PLEKHH1Q9ULM0 1364 aa21.39■■□□□ 1.02
CUEDC1-207ENST00000577840 NWD1Q149M9 1564 aa21.39■■□□□ 1.01
CUEDC1-207ENST00000577840 NKTRP30414 1462 aaKnown RBP21.35■■□□□ 1.01
CUEDC1-207ENST00000577840 DDX10Q13206 875 aaKnown RBP21.35■■□□□ 1.01
CUEDC1-207ENST00000577840 SRPK2P78362 688 aaKnown RBP21.34■■□□□ 1.01
CUEDC1-207ENST00000577840 PUS7Q96PZ0 661 aaKnown RBP21.34■■□□□ 1.01
CUEDC1-207ENST00000577840 PROSER2Q86WR7 435 aaPredicted RBP21.33■■□□□ 1.01
CUEDC1-207ENST00000577840 TULP4Q9NRJ4 1543 aa21.32■■□□□ 1
CUEDC1-207ENST00000577840 DIEXFQ68CQ4 756 aaKnown RBP21.31■■□□□ 1
CUEDC1-207ENST00000577840 CDK19Q9BWU1 502 aa21.31■■□□□ 1
CUEDC1-207ENST00000577840 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.31■■□□□ 1
CUEDC1-207ENST00000577840 ADGRB2O60241 1585 aa21.31■■□□□ 1
CUEDC1-207ENST00000577840 WASLO00401 505 aaPredicted RBP21.3■■□□□ 1
CUEDC1-207ENST00000577840 C14orf37Q86TY3 774 aa21.3■■□□□ 1
CUEDC1-207ENST00000577840 ATAD2Q6PL18 1390 aa21.29■■□□□ 1
CUEDC1-207ENST00000577840 CABP2Q9NPB3 220 aa21.29■■□□□ 1
CUEDC1-207ENST00000577840 TMC1Q8TDI8 760 aa21.25■□□□□ 0.99
CUEDC1-207ENST00000577840 NCOA3Q9Y6Q9 1424 aa21.25■□□□□ 0.99
CUEDC1-207ENST00000577840 NINLQ9Y2I6 1382 aa21.24■□□□□ 0.99
CUEDC1-207ENST00000577840 ADGRL3Q9HAR2 1447 aa21.24■□□□□ 0.99
CUEDC1-207ENST00000577840 ROBO1Q9Y6N7 1651 aa21.24■□□□□ 0.99
CUEDC1-207ENST00000577840 RBM33Q96EV2 1170 aaKnown RBP21.23■□□□□ 0.99
CUEDC1-207ENST00000577840 NALCNQ8IZF0 1738 aa21.23■□□□□ 0.99
CUEDC1-207ENST00000577840 TMEM94Q12767 1356 aa21.22■□□□□ 0.99
CUEDC1-207ENST00000577840 CDC42BPGQ6DT37 1551 aa21.21■□□□□ 0.99
CUEDC1-207ENST00000577840 MYOM1P52179 1685 aa21.21■□□□□ 0.99
CUEDC1-207ENST00000577840 NUDT16Q96DE0 195 aaKnown RBP21.2■□□□□ 0.98
CUEDC1-207ENST00000577840 C19orf44Q9H6X5 657 aa21.2■□□□□ 0.98
CUEDC1-207ENST00000577840 PANK3Q9H999 370 aa21.19■□□□□ 0.98
CUEDC1-207ENST00000577840 CCDC61Q9Y6R9 512 aa21.19■□□□□ 0.98
CUEDC1-207ENST00000577840 FMN2Q9NZ56 1722 aa21.18■□□□□ 0.98
CUEDC1-207ENST00000577840 SLC12A5Q9H2X9 1139 aa21.17■□□□□ 0.98
CUEDC1-207ENST00000577840 MSH6P52701 1360 aa21.17■□□□□ 0.98
CUEDC1-207ENST00000577840 ANKARQ7Z5J8 1434 aa21.17■□□□□ 0.98
CUEDC1-207ENST00000577840 NUTM2FA1L443 756 aa21.16■□□□□ 0.98
CUEDC1-207ENST00000577840 ATF3P18847 181 aa21.16■□□□□ 0.98
CUEDC1-207ENST00000577840 HDGFL2Q7Z4V5 671 aaPredicted RBP21.16■□□□□ 0.98
CUEDC1-207ENST00000577840 TERF2IPQ9NYB0 399 aa21.16■□□□□ 0.98
CUEDC1-207ENST00000577840 ITSN1Q15811 1721 aa21.15■□□□□ 0.98
CUEDC1-207ENST00000577840 ATP7BP35670 1465 aa21.15■□□□□ 0.98
CUEDC1-207ENST00000577840 PPIP5K1Q6PFW1 1433 aa21.15■□□□□ 0.98
CUEDC1-207ENST00000577840 CABP1Q9NZU7 370 aa21.15■□□□□ 0.98
CUEDC1-207ENST00000577840 DCCP43146 1447 aa21.14■□□□□ 0.98
CUEDC1-207ENST00000577840 ANKRD36BQ8N2N9 1353 aa21.13■□□□□ 0.97
CUEDC1-207ENST00000577840 PRR36Q9H6K5 1346 aa21.13■□□□□ 0.97
CUEDC1-207ENST00000577840 ANP32CO43423 234 aa21.13■□□□□ 0.97
CUEDC1-207ENST00000577840 KNSTRNQ9Y448 316 aa21.13■□□□□ 0.97
CUEDC1-207ENST00000577840 PHLPP1O60346 1717 aa21.12■□□□□ 0.97
CUEDC1-207ENST00000577840 CADPS2Q86UW7 1296 aa21.12■□□□□ 0.97
CUEDC1-207ENST00000577840 UPF1Q92900 1129 aaKnown RBP eCLIP21.11■□□□□ 0.97
CUEDC1-207ENST00000577840 TOPAZ1Q8N9V7 1692 aa21.11■□□□□ 0.97
CUEDC1-207ENST00000577840 USP32Q8NFA0 1604 aa21.1■□□□□ 0.97
CUEDC1-207ENST00000577840 PLEKHG3A1L390 1219 aa21.09■□□□□ 0.97
CUEDC1-207ENST00000577840 RGPD8O14715 1765 aaPredicted RBP21.09■□□□□ 0.97
CUEDC1-207ENST00000577840 ZNF692Q9BU19 519 aaPredicted RBP21.08■□□□□ 0.97
CUEDC1-207ENST00000577840 A0A1W2PP64 1363 aa21.08■□□□□ 0.96
CUEDC1-207ENST00000577840 PER1O15534 1290 aaPredicted RBP21.07■□□□□ 0.96
CUEDC1-207ENST00000577840 NGDNQ8NEJ9 315 aaKnown RBP21.06■□□□□ 0.96
CUEDC1-207ENST00000577840 NSD3Q9BZ95 1437 aa21.05■□□□□ 0.96
CUEDC1-207ENST00000577840 LRP6O75581 1613 aa21.05■□□□□ 0.96
CUEDC1-207ENST00000577840 ESCO1Q5FWF5 840 aa21.05■□□□□ 0.96
CUEDC1-207ENST00000577840 PMFBP1Q8TBY8 1022 aa21.05■□□□□ 0.96
CUEDC1-207ENST00000577840 KTN1Q86UP2 1357 aaKnown RBP21.05■□□□□ 0.96
CUEDC1-207ENST00000577840 ACEP12821 1306 aa21.04■□□□□ 0.96
CUEDC1-207ENST00000577840 CARD14Q9BXL6 1004 aa21.04■□□□□ 0.96
CUEDC1-207ENST00000577840 PHF8Q9UPP1 1060 aa21.04■□□□□ 0.96
CUEDC1-207ENST00000577840 CD163L1Q9NR16 1453 aa21.04■□□□□ 0.96
CUEDC1-207ENST00000577840 CPSF1Q10570 1443 aaKnown RBP21.04■□□□□ 0.96
CUEDC1-207ENST00000577840 AKAP12Q02952 1782 aa21.03■□□□□ 0.96
CUEDC1-207ENST00000577840 C1orf167Q5SNV9 1468 aa21.03■□□□□ 0.96
CUEDC1-207ENST00000577840 COL16A1Q07092 1604 aaPredicted RBP21.03■□□□□ 0.96
CUEDC1-207ENST00000577840 MST1RQ04912 1400 aa21.03■□□□□ 0.96
CUEDC1-207ENST00000577840 CGNL1Q0VF96 1302 aa21.03■□□□□ 0.96
CUEDC1-207ENST00000577840 CNGB1Q14028 1251 aaPredicted RBP21.02■□□□□ 0.96
CUEDC1-207ENST00000577840 JCADQ9P266 1359 aa21.01■□□□□ 0.95
CUEDC1-207ENST00000577840 POLR3AO14802 1390 aaPredicted RBP21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms