RNA–Protein interactions for RNA: ENST00000577830.5

CUEDC1-206, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUEDC1, Length 3,621 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-206ENST00000577830 NSD3Q9BZ95 1437 aa18.8■□□□□ 0.6
CUEDC1-206ENST00000577830 RARSP54136 660 aaKnown RBP18.8■□□□□ 0.6
CUEDC1-206ENST00000577830 GGNBP2Q9H3C7 697 aa18.8■□□□□ 0.6
CUEDC1-206ENST00000577830 SMC4Q9NTJ3 1288 aa18.8■□□□□ 0.6
CUEDC1-206ENST00000577830 ATP10AO60312 1499 aa18.8■□□□□ 0.6
CUEDC1-206ENST00000577830 RTEL1-TNFRSF6BF6WH68 1400 aa18.8■□□□□ 0.6
CUEDC1-206ENST00000577830 IQGAP3Q86VI3 1631 aa18.8■□□□□ 0.6
CUEDC1-206ENST00000577830 PDE3AQ14432 1141 aa18.77■□□□□ 0.6
CUEDC1-206ENST00000577830 CFAP65Q6ZU64 1925 aaKnown RBP18.77■□□□□ 0.59
CUEDC1-206ENST00000577830 MLECQ14165 292 aa18.76■□□□□ 0.59
CUEDC1-206ENST00000577830 TRMT2AQ8IZ69 625 aaKnown RBP18.76■□□□□ 0.59
CUEDC1-206ENST00000577830 FAM69CQ0P6D2 419 aa18.75■□□□□ 0.59
CUEDC1-206ENST00000577830 RWDD1Q9H446 243 aaPredicted RBP18.75■□□□□ 0.59
CUEDC1-206ENST00000577830 ELL2O00472 640 aaPredicted RBP18.75■□□□□ 0.59
CUEDC1-206ENST00000577830 PMFBP1Q8TBY8 1022 aa18.75■□□□□ 0.59
CUEDC1-206ENST00000577830 FBLN1P23142 703 aa18.75■□□□□ 0.59
CUEDC1-206ENST00000577830 MAPK8IP3Q9UPT6 1336 aa18.75■□□□□ 0.59
CUEDC1-206ENST00000577830 FOXD4L1Q9NU39 408 aa18.74■□□□□ 0.59
CUEDC1-206ENST00000577830 EXOSC9Q06265 439 aaKnown RBP18.74■□□□□ 0.59
CUEDC1-206ENST00000577830 EIF2AK4Q9P2K8 1649 aaKnown RBP18.74■□□□□ 0.59
CUEDC1-206ENST00000577830 MINK1Q8N4C8 1332 aaPredicted RBP18.73■□□□□ 0.59
CUEDC1-206ENST00000577830 PIK3C2GO75747 1445 aa18.73■□□□□ 0.59
CUEDC1-206ENST00000577830 NOS1P29475 1434 aa18.72■□□□□ 0.59
CUEDC1-206ENST00000577830 MYH16Q9H6N6 1097 aa18.72■□□□□ 0.59
CUEDC1-206ENST00000577830 KLHL34Q8N239 644 aa18.71■□□□□ 0.59
CUEDC1-206ENST00000577830 ZKSCAN2Q63HK3 967 aa18.7■□□□□ 0.58
CUEDC1-206ENST00000577830 DZIP1LQ8IYY4 767 aaKnown RBP18.7■□□□□ 0.58
CUEDC1-206ENST00000577830 ZNF518AQ6AHZ1 1483 aa18.7■□□□□ 0.58
CUEDC1-206ENST00000577830 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.7■□□□□ 0.58
CUEDC1-206ENST00000577830 ABCA9Q8IUA7 1624 aa18.7■□□□□ 0.58
CUEDC1-206ENST00000577830 USP19O94966 1318 aa18.7■□□□□ 0.58
CUEDC1-206ENST00000577830 TBC1D2Q9BYX2 928 aa18.68■□□□□ 0.58
CUEDC1-206ENST00000577830 LNPKQ9C0E8 428 aa18.68■□□□□ 0.58
CUEDC1-206ENST00000577830 CLTCL1P53675 1640 aa18.67■□□□□ 0.58
CUEDC1-206ENST00000577830 HSP90AA1P07900 732 aaKnown RBP18.67■□□□□ 0.58
CUEDC1-206ENST00000577830 STAG3Q9UJ98 1225 aa18.67■□□□□ 0.58
CUEDC1-206ENST00000577830 ERVK-7P63135 1459 aa18.66■□□□□ 0.58
CUEDC1-206ENST00000577830 PTPRTO14522 1441 aa18.66■□□□□ 0.58
CUEDC1-206ENST00000577830 RIPK4P57078 832 aa18.66■□□□□ 0.58
CUEDC1-206ENST00000577830 C1orf115Q9H7X2 142 aa18.66■□□□□ 0.58
CUEDC1-206ENST00000577830 NOB1Q9ULX3 412 aaKnown RBP18.66■□□□□ 0.58
CUEDC1-206ENST00000577830 INSRP06213 1382 aa18.65■□□□□ 0.58
CUEDC1-206ENST00000577830 ARAP3Q8WWN8 1544 aa18.65■□□□□ 0.58
CUEDC1-206ENST00000577830 MVPQ14764 893 aaKnown RBP18.65■□□□□ 0.58
CUEDC1-206ENST00000577830 SSH1Q8WYL5 1049 aa18.65■□□□□ 0.58
CUEDC1-206ENST00000577830 STAC3Q96MF2 364 aa18.65■□□□□ 0.58
CUEDC1-206ENST00000577830 FBXO31Q5XUX0 539 aaPredicted RBP18.64■□□□□ 0.58
CUEDC1-206ENST00000577830 THUMPD2Q9BTF0 503 aaKnown RBP18.64■□□□□ 0.58
CUEDC1-206ENST00000577830 POGZQ7Z3K3 1410 aa18.64■□□□□ 0.57
CUEDC1-206ENST00000577830 TRPM2O94759 1503 aa18.64■□□□□ 0.57
CUEDC1-206ENST00000577830 HMOX1P09601 288 aa18.63■□□□□ 0.57
CUEDC1-206ENST00000577830 C22orf23Q9BZE7 217 aa18.63■□□□□ 0.57
CUEDC1-206ENST00000577830 EVC2Q86UK5 1308 aa18.63■□□□□ 0.57
CUEDC1-206ENST00000577830 INO80Q9ULG1 1556 aaPredicted RBP18.63■□□□□ 0.57
CUEDC1-206ENST00000577830 NPATQ14207 1427 aa18.62■□□□□ 0.57
CUEDC1-206ENST00000577830 TRIM27P14373 513 aa18.62■□□□□ 0.57
CUEDC1-206ENST00000577830 IDI1Q13907 227 aa18.62■□□□□ 0.57
CUEDC1-206ENST00000577830 MADDQ8WXG6 1647 aa18.62■□□□□ 0.57
CUEDC1-206ENST00000577830 APBB1O00213 710 aa18.62■□□□□ 0.57
CUEDC1-206ENST00000577830 WDR63Q8IWG1 891 aa18.61■□□□□ 0.57
CUEDC1-206ENST00000577830 TMEM57Q8N5G2 664 aa18.61■□□□□ 0.57
CUEDC1-206ENST00000577830 YEATS2Q9ULM3 1422 aa18.61■□□□□ 0.57
CUEDC1-206ENST00000577830 POLR3AO14802 1390 aaPredicted RBP18.6■□□□□ 0.57
CUEDC1-206ENST00000577830 KIDINS220Q9ULH0 1771 aa18.6■□□□□ 0.57
CUEDC1-206ENST00000577830 TBC1D32Q96NH3 1257 aa18.6■□□□□ 0.57
CUEDC1-206ENST00000577830 TMPOP42166 694 aaKnown RBP18.59■□□□□ 0.57
CUEDC1-206ENST00000577830 HSCBQ8IWL3 235 aa18.59■□□□□ 0.57
CUEDC1-206ENST00000577830 C14orf93Q9H972 538 aaKnown RBP18.59■□□□□ 0.57
CUEDC1-206ENST00000577830 SYNMO15061 1565 aa18.58■□□□□ 0.57
CUEDC1-206ENST00000577830 NGEFQ8N5V2 710 aa18.58■□□□□ 0.57
CUEDC1-206ENST00000577830 ANKRD45Q5TZF3 282 aa18.58■□□□□ 0.56
CUEDC1-206ENST00000577830 NPC1L1Q9UHC9 1359 aa18.58■□□□□ 0.56
CUEDC1-206ENST00000577830 SOX12O15370 315 aa18.57■□□□□ 0.56
CUEDC1-206ENST00000577830 SPHKAPQ2M3C7 1700 aa18.57■□□□□ 0.56
CUEDC1-206ENST00000577830 PRAM1Q96QH2 718 aa18.57■□□□□ 0.56
CUEDC1-206ENST00000577830 TET3O43151 1660 aa18.57■□□□□ 0.56
CUEDC1-206ENST00000577830 HSP90AB1P08238 724 aaKnown RBP18.56■□□□□ 0.56
CUEDC1-206ENST00000577830 ATF7IPQ6VMQ6 1270 aa18.55■□□□□ 0.56
CUEDC1-206ENST00000577830 PANK2Q9BZ23 570 aa18.55■□□□□ 0.56
CUEDC1-206ENST00000577830 RIMBP3CA6NJZ7 1639 aa18.55■□□□□ 0.56
CUEDC1-206ENST00000577830 RIMBP3BA6NNM3 1639 aa18.55■□□□□ 0.56
CUEDC1-206ENST00000577830 RIMBP3Q9UFD9 1639 aa18.55■□□□□ 0.56
CUEDC1-206ENST00000577830 VGFO15240 615 aaPredicted RBP18.55■□□□□ 0.56
CUEDC1-206ENST00000577830 GOLGA6L3A6NEY3 463 aa18.54■□□□□ 0.56
CUEDC1-206ENST00000577830 MROH1Q8NDA8 1641 aa18.54■□□□□ 0.56
CUEDC1-206ENST00000577830 DIAPH1O60610 1272 aaKnown RBP18.54■□□□□ 0.56
CUEDC1-206ENST00000577830 DDX19BQ9UMR2 479 aa18.54■□□□□ 0.56
CUEDC1-206ENST00000577830 KDM5AP29375 1690 aaKnown RBP18.54■□□□□ 0.56
CUEDC1-206ENST00000577830 CABP1Q9NZU7 370 aa18.53■□□□□ 0.56
CUEDC1-206ENST00000577830 PPRC1Q5VV67 1664 aaKnown RBP18.53■□□□□ 0.56
CUEDC1-206ENST00000577830 LAMC1P11047 1609 aa18.53■□□□□ 0.56
CUEDC1-206ENST00000577830 PRKAR2BP31323 418 aa18.53■□□□□ 0.56
CUEDC1-206ENST00000577830 EFCAB6Q5THR3 1501 aa18.52■□□□□ 0.56
CUEDC1-206ENST00000577830 CEP152O94986 1710 aa18.52■□□□□ 0.56
CUEDC1-206ENST00000577830 NUTM2FA1L443 756 aa18.52■□□□□ 0.56
CUEDC1-206ENST00000577830 MCM4P33991 863 aa18.51■□□□□ 0.55
CUEDC1-206ENST00000577830 TERF2IPQ9NYB0 399 aa18.5■□□□□ 0.55
CUEDC1-206ENST00000577830 MLH3Q9UHC1 1453 aa18.5■□□□□ 0.55
CUEDC1-206ENST00000577830 DEPDC5O75140 1603 aa18.5■□□□□ 0.55
CUEDC1-206ENST00000577830 NAP1L5Q96NT1 182 aaPredicted RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms