RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 REPIN1Q9BWE0 567 aaKnown RBP8.76□□□□□ -1.01
TOP2A-202ENST00000577541 SALL2Q9Y467 1007 aaPredicted RBP8.76□□□□□ -1.01
TOP2A-202ENST00000577541 ATP6V1AP38606 617 aa8.75□□□□□ -1.01
TOP2A-202ENST00000577541 OATP04181 439 aa8.74□□□□□ -1.01
TOP2A-202ENST00000577541 GSK3AP49840 483 aa8.74□□□□□ -1.01
TOP2A-202ENST00000577541 KCNMA1Q12791 1236 aa8.74□□□□□ -1.01
TOP2A-202ENST00000577541 BRICD5Q6PL45 260 aa8.74□□□□□ -1.01
TOP2A-202ENST00000577541 FECHP22830 423 aa8.73□□□□□ -1.01
TOP2A-202ENST00000577541 MSS51Q4VC12 460 aa8.73□□□□□ -1.01
TOP2A-202ENST00000577541 RNF19BQ6ZMZ0 732 aa8.73□□□□□ -1.01
TOP2A-202ENST00000577541 BBXQ8WY36 941 aaPredicted RBP8.73□□□□□ -1.01
TOP2A-202ENST00000577541 TRIM46Q7Z4K8 759 aa8.72□□□□□ -1.01
TOP2A-202ENST00000577541 NUTM2FA1L443 756 aa8.71□□□□□ -1.02
TOP2A-202ENST00000577541 BMP1P13497 986 aa8.71□□□□□ -1.02
TOP2A-202ENST00000577541 RDH13Q8NBN7 331 aa8.71□□□□□ -1.02
TOP2A-202ENST00000577541 SKOR1P84550 965 aa8.7□□□□□ -1.02
TOP2A-202ENST00000577541 RC3H1Q5TC82 1133 aaKnown RBP8.7□□□□□ -1.02
TOP2A-202ENST00000577541 METTL3Q86U44 580 aaKnown RBP8.69□□□□□ -1.02
TOP2A-202ENST00000577541 ALDH1A1P00352 501 aa8.68□□□□□ -1.02
TOP2A-202ENST00000577541 SPRYD3Q8NCJ5 442 aa8.67□□□□□ -1.02
TOP2A-202ENST00000577541 NLRP7Q8WX94 980 aa8.67□□□□□ -1.02
TOP2A-202ENST00000577541 CAPN5O15484 640 aaPredicted RBP8.66□□□□□ -1.02
TOP2A-202ENST00000577541 FCHSD2O94868 740 aa8.66□□□□□ -1.02
TOP2A-202ENST00000577541 MMP16P51512 607 aa8.66□□□□□ -1.02
TOP2A-202ENST00000577541 TMEM151AQ8N4L1 468 aa8.66□□□□□ -1.02
TOP2A-202ENST00000577541 DAXXQ9UER7 740 aaPredicted RBP8.66□□□□□ -1.02
TOP2A-202ENST00000577541 GCGRP47871 477 aa8.65□□□□□ -1.02
TOP2A-202ENST00000577541 WNT7BP56706 349 aa8.65□□□□□ -1.02
TOP2A-202ENST00000577541 DDX11L8A8MPP1 907 aa8.64□□□□□ -1.03
TOP2A-202ENST00000577541 GDF11O95390 407 aa8.63□□□□□ -1.03
TOP2A-202ENST00000577541 VSIG8P0DPA2 414 aa8.61□□□□□ -1.03
TOP2A-202ENST00000577541 RASSF7Q02833 373 aa8.61□□□□□ -1.03
TOP2A-202ENST00000577541 Q3C1V9 767 aa8.61□□□□□ -1.03
TOP2A-202ENST00000577541 GRIPAP1Q4V328 841 aa8.61□□□□□ -1.03
TOP2A-202ENST00000577541 ZFP42Q96MM3 310 aa8.61□□□□□ -1.03
TOP2A-202ENST00000577541 SIAH2O43255 324 aa8.6□□□□□ -1.03
TOP2A-202ENST00000577541 CCDC24Q8N4L8 307 aa8.6□□□□□ -1.03
TOP2A-202ENST00000577541 ARHGEF1Q92888 912 aaKnown RBP8.6□□□□□ -1.03
TOP2A-202ENST00000577541 DXOO77932 396 aaKnown RBP8.59□□□□□ -1.03
TOP2A-202ENST00000577541 WASF2Q9Y6W5 498 aa8.59□□□□□ -1.03
TOP2A-202ENST00000577541 SULF1Q8IWU6 871 aa8.58□□□□□ -1.04
TOP2A-202ENST00000577541 KCNV2Q8TDN2 545 aa8.57□□□□□ -1.04
TOP2A-202ENST00000577541 PHOX2BQ99453 314 aa8.57□□□□□ -1.04
TOP2A-202ENST00000577541 USB1Q9BQ65 265 aaKnown RBP8.57□□□□□ -1.04
TOP2A-202ENST00000577541 SOBPA7XYQ1 873 aa8.56□□□□□ -1.04
TOP2A-202ENST00000577541 HIC1Q14526 733 aa8.55□□□□□ -1.04
TOP2A-202ENST00000577541 EHBP1Q8NDI1 1231 aa8.55□□□□□ -1.04
TOP2A-202ENST00000577541 RNF225M0QZC1 329 aaPredicted RBP8.54□□□□□ -1.04
TOP2A-202ENST00000577541 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.53□□□□□ -1.04
TOP2A-202ENST00000577541 SCARF1Q14162 830 aa8.52□□□□□ -1.05
TOP2A-202ENST00000577541 PTCRAQ6ISU1 281 aaPredicted RBP8.52□□□□□ -1.05
TOP2A-202ENST00000577541 PAXIP1Q6ZW49 1069 aaPredicted RBP8.52□□□□□ -1.05
TOP2A-202ENST00000577541 HLA-CQ95604 372 aa8.52□□□□□ -1.05
TOP2A-202ENST00000577541 CFAP44Q96MT7 982 aa8.52□□□□□ -1.05
TOP2A-202ENST00000577541 XP32Q5T750 250 aa8.5□□□□□ -1.05
TOP2A-202ENST00000577541 MRPL14Q6P1L8 145 aaKnown RBP8.5□□□□□ -1.05
TOP2A-202ENST00000577541 ADAMTS8Q9UP79 889 aa8.5□□□□□ -1.05
TOP2A-202ENST00000577541 IGHA1P01876 353 aa8.49□□□□□ -1.05
TOP2A-202ENST00000577541 GPAT2Q6NUI2 795 aa8.49□□□□□ -1.05
TOP2A-202ENST00000577541 PURBQ96QR8 312 aaKnown RBP8.49□□□□□ -1.05
TOP2A-202ENST00000577541 SEMA3EO15041 775 aa8.48□□□□□ -1.05
TOP2A-202ENST00000577541 GPR37O15354 613 aa8.47□□□□□ -1.05
TOP2A-202ENST00000577541 KRT76Q01546 638 aa8.45□□□□□ -1.06
TOP2A-202ENST00000577541 RBM26Q5T8P6 1007 aaKnown RBP8.45□□□□□ -1.06
TOP2A-202ENST00000577541 DNMT3AQ9Y6K1 912 aaPredicted RBP8.45□□□□□ -1.06
TOP2A-202ENST00000577541 GNPATO15228 680 aa8.44□□□□□ -1.06
TOP2A-202ENST00000577541 PPFIA3O75145 1194 aa8.44□□□□□ -1.06
TOP2A-202ENST00000577541 SH3BP2P78314 561 aa8.44□□□□□ -1.06
TOP2A-202ENST00000577541 JUNDP17535 347 aa8.43□□□□□ -1.06
TOP2A-202ENST00000577541 SYMPKQ92797 1274 aaKnown RBP8.43□□□□□ -1.06
TOP2A-202ENST00000577541 MAN1A2O60476 641 aa8.42□□□□□ -1.06
TOP2A-202ENST00000577541 CD46P15529 392 aa8.42□□□□□ -1.06
TOP2A-202ENST00000577541 NNTQ13423 1086 aa8.42□□□□□ -1.06
TOP2A-202ENST00000577541 GPR161Q8N6U8 529 aaKnown RBP8.42□□□□□ -1.06
TOP2A-202ENST00000577541 TLL2Q9Y6L7 1015 aa8.42□□□□□ -1.06
TOP2A-202ENST00000577541 PLEKHG3A1L390 1219 aa8.41□□□□□ -1.06
TOP2A-202ENST00000577541 KDM4AO75164 1064 aa8.41□□□□□ -1.06
TOP2A-202ENST00000577541 FOXK2Q01167 660 aa8.41□□□□□ -1.06
TOP2A-202ENST00000577541 GUCA2AQ02747 115 aa8.41□□□□□ -1.06
TOP2A-202ENST00000577541 NUDT12Q9BQG2 462 aa8.41□□□□□ -1.06
TOP2A-202ENST00000577541 TIMP2P16035 220 aa8.4□□□□□ -1.06
TOP2A-202ENST00000577541 IRS1P35568 1242 aa8.4□□□□□ -1.06
TOP2A-202ENST00000577541 WDR4P57081 412 aaKnown RBP8.4□□□□□ -1.06
TOP2A-202ENST00000577541 KLF16Q9BXK1 252 aaPredicted RBP8.4□□□□□ -1.06
TOP2A-202ENST00000577541 ADH1CP00326 375 aa8.39□□□□□ -1.07
TOP2A-202ENST00000577541 CNTNAP3BQ96NU0 1288 aa8.39□□□□□ -1.07
TOP2A-202ENST00000577541 CNTNAP3Q9BZ76 1288 aa8.39□□□□□ -1.07
TOP2A-202ENST00000577541 USP46P62068 366 aa8.38□□□□□ -1.07
TOP2A-202ENST00000577541 MPNDQ8N594 471 aa8.38□□□□□ -1.07
TOP2A-202ENST00000577541 KRTAP4-8Q9BYQ9 185 aa8.38□□□□□ -1.07
TOP2A-202ENST00000577541 ZNF385CQ66K41 422 aaPredicted RBP8.36□□□□□ -1.07
TOP2A-202ENST00000577541 KANK3Q6NY19 840 aa8.36□□□□□ -1.07
TOP2A-202ENST00000577541 VARSP26640 1264 aaKnown RBP8.35□□□□□ -1.07
TOP2A-202ENST00000577541 LINC01559Q495D7 138 aa8.35□□□□□ -1.07
TOP2A-202ENST00000577541 SVOPQ8N4V2 548 aa8.35□□□□□ -1.07
TOP2A-202ENST00000577541 HOXA2O43364 376 aa8.34□□□□□ -1.07
TOP2A-202ENST00000577541 C6orf118Q5T5N4 469 aa8.34□□□□□ -1.07
TOP2A-202ENST00000577541 TSHZ2Q9NRE2 1034 aa8.34□□□□□ -1.07
TOP2A-202ENST00000577541 WHAMMQ8TF30 809 aa8.33□□□□□ -1.08
TOP2A-202ENST00000577541 BAP1Q92560 729 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms