RNA–Protein interactions for RNA: ENST00000577483.1

SSH2-205, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 1,630 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-205ENST00000577483 STK26Q9P289 416 aa18.66■□□□□ 0.58
SSH2-205ENST00000577483 C14orf93Q9H972 538 aaKnown RBP18.65■□□□□ 0.58
SSH2-205ENST00000577483 CFAP70Q5T0N1 1121 aa18.64■□□□□ 0.57
SSH2-205ENST00000577483 DDX17Q92841 729 aaKnown RBP18.64■□□□□ 0.57
SSH2-205ENST00000577483 WAPLQ7Z5K2 1190 aa18.63■□□□□ 0.57
SSH2-205ENST00000577483 ARHGEF28Q8N1W1 1705 aaKnown RBP18.62■□□□□ 0.57
SSH2-205ENST00000577483 ORAI2Q96SN7 254 aa18.61■□□□□ 0.57
SSH2-205ENST00000577483 SPATA31A6Q5VVP1 1343 aa18.61■□□□□ 0.57
SSH2-205ENST00000577483 DLC1Q96QB1 1528 aa18.61■□□□□ 0.57
SSH2-205ENST00000577483 DHX57Q6P158 1386 aaKnown RBP18.6■□□□□ 0.57
SSH2-205ENST00000577483 KIF1AQ12756 1690 aa18.6■□□□□ 0.57
SSH2-205ENST00000577483 KIAA1210Q9ULL0 1709 aa18.59■□□□□ 0.57
SSH2-205ENST00000577483 USP32Q8NFA0 1604 aa18.59■□□□□ 0.57
SSH2-205ENST00000577483 COL22A1Q8NFW1 1626 aaPredicted RBP18.59■□□□□ 0.57
SSH2-205ENST00000577483 ADGRB2O60241 1585 aa18.58■□□□□ 0.57
SSH2-205ENST00000577483 DCAF11Q8TEB1 546 aa18.58■□□□□ 0.56
SSH2-205ENST00000577483 KDM2AQ9Y2K7 1162 aa18.57■□□□□ 0.56
SSH2-205ENST00000577483 MARF1Q9Y4F3 1742 aaKnown RBP18.57■□□□□ 0.56
SSH2-205ENST00000577483 PNPLA6Q8IY17 1366 aa18.57■□□□□ 0.56
SSH2-205ENST00000577483 POTEAQ6S8J7 498 aa18.56■□□□□ 0.56
SSH2-205ENST00000577483 PXDNQ92626 1479 aa18.56■□□□□ 0.56
SSH2-205ENST00000577483 SOS2Q07890 1332 aaPredicted RBP18.55■□□□□ 0.56
SSH2-205ENST00000577483 SIRT1Q96EB6 747 aa18.55■□□□□ 0.56
SSH2-205ENST00000577483 LRRC59Q96AG4 307 aaKnown RBP18.54■□□□□ 0.56
SSH2-205ENST00000577483 NUTM2FA1L443 756 aa18.53■□□□□ 0.56
SSH2-205ENST00000577483 ESCO1Q5FWF5 840 aa18.52■□□□□ 0.56
SSH2-205ENST00000577483 PRAM1Q96QH2 718 aa18.52■□□□□ 0.55
SSH2-205ENST00000577483 NUTM2BA6NNL0 878 aaPredicted RBP18.51■□□□□ 0.55
SSH2-205ENST00000577483 NUTM2EB1AL46 878 aaPredicted RBP18.51■□□□□ 0.55
SSH2-205ENST00000577483 SAFB2Q14151 953 aaKnown RBP eCLIP18.51■□□□□ 0.55
SSH2-205ENST00000577483 MEX3CQ5U5Q3 659 aaKnown RBP18.51■□□□□ 0.55
SSH2-205ENST00000577483 NUTM2AQ8IVF1 878 aaPredicted RBP18.51■□□□□ 0.55
SSH2-205ENST00000577483 STAC3Q96MF2 364 aa18.49■□□□□ 0.55
SSH2-205ENST00000577483 TRAK1Q9UPV9 953 aa18.49■□□□□ 0.55
SSH2-205ENST00000577483 NPHP3Q7Z494 1330 aa18.48■□□□□ 0.55
SSH2-205ENST00000577483 ITSN1Q15811 1721 aa18.48■□□□□ 0.55
SSH2-205ENST00000577483 ABCA3Q99758 1704 aa18.48■□□□□ 0.55
SSH2-205ENST00000577483 FOXO3O43524 673 aa18.47■□□□□ 0.55
SSH2-205ENST00000577483 XPCQ01831 940 aaPredicted RBP18.47■□□□□ 0.55
SSH2-205ENST00000577483 TRPM3Q9HCF6 1732 aaPredicted RBP18.47■□□□□ 0.55
SSH2-205ENST00000577483 TRPM1Q7Z4N2 1603 aa18.46■□□□□ 0.55
SSH2-205ENST00000577483 POGKQ9P215 609 aa18.45■□□□□ 0.54
SSH2-205ENST00000577483 TULP4Q9NRJ4 1543 aa18.45■□□□□ 0.54
SSH2-205ENST00000577483 TOPAZ1Q8N9V7 1692 aa18.44■□□□□ 0.54
SSH2-205ENST00000577483 ANKARQ7Z5J8 1434 aa18.44■□□□□ 0.54
SSH2-205ENST00000577483 HIRIP3Q9BW71 556 aaPredicted RBP18.43■□□□□ 0.54
SSH2-205ENST00000577483 AFF2P51816 1311 aa18.43■□□□□ 0.54
SSH2-205ENST00000577483 QRICH2Q9H0J4 1663 aa18.43■□□□□ 0.54
SSH2-205ENST00000577483 ZNF772Q68DY9 489 aaPredicted RBP18.42■□□□□ 0.54
SSH2-205ENST00000577483 MINK1Q8N4C8 1332 aaPredicted RBP18.42■□□□□ 0.54
SSH2-205ENST00000577483 ALS2Q96Q42 1657 aa18.42■□□□□ 0.54
SSH2-205ENST00000577483 C8orf37Q96NL8 207 aa18.41■□□□□ 0.54
SSH2-205ENST00000577483 ADAMTS2O95450 1211 aa18.4■□□□□ 0.54
SSH2-205ENST00000577483 SIN3AQ96ST3 1273 aa18.4■□□□□ 0.54
SSH2-205ENST00000577483 PHF8Q9UPP1 1060 aa18.4■□□□□ 0.54
SSH2-205ENST00000577483 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.4■□□□□ 0.54
SSH2-205ENST00000577483 CRYBG1Q9Y4K1 1723 aa18.4■□□□□ 0.54
SSH2-205ENST00000577483 PRR36Q9H6K5 1346 aa18.39■□□□□ 0.53
SSH2-205ENST00000577483 ATP7BP35670 1465 aa18.39■□□□□ 0.53
SSH2-205ENST00000577483 TNS3Q68CZ2 1445 aa18.38■□□□□ 0.53
SSH2-205ENST00000577483 PLCH1Q4KWH8 1693 aa18.38■□□□□ 0.53
SSH2-205ENST00000577483 SPATA31A3Q5VYP0 1347 aa18.38■□□□□ 0.53
SSH2-205ENST00000577483 NBPF1Q3BBV0 1214 aa18.38■□□□□ 0.53
SSH2-205ENST00000577483 L3MBTL2Q969R5 705 aa18.37■□□□□ 0.53
SSH2-205ENST00000577483 WASLO00401 505 aaPredicted RBP18.36■□□□□ 0.53
SSH2-205ENST00000577483 KRT28Q7Z3Y7 464 aa18.36■□□□□ 0.53
SSH2-205ENST00000577483 EIF3AQ14152 1382 aaKnown RBP18.36■□□□□ 0.53
SSH2-205ENST00000577483 PMFBP1Q8TBY8 1022 aa18.35■□□□□ 0.53
SSH2-205ENST00000577483 CDK12Q9NYV4 1490 aaPredicted RBP18.35■□□□□ 0.53
SSH2-205ENST00000577483 NGLY1Q96IV0 654 aa18.34■□□□□ 0.53
SSH2-205ENST00000577483 SBNO1A3KN83 1393 aa18.33■□□□□ 0.53
SSH2-205ENST00000577483 NWD2Q9ULI1 1742 aa18.33■□□□□ 0.52
SSH2-205ENST00000577483 NEUROD1Q13562 356 aa18.32■□□□□ 0.52
SSH2-205ENST00000577483 RGS12O14924 1447 aa18.32■□□□□ 0.52
SSH2-205ENST00000577483 RXRBP28702 533 aa18.31■□□□□ 0.52
SSH2-205ENST00000577483 BCL9LQ86UU0 1499 aa18.31■□□□□ 0.52
SSH2-205ENST00000577483 PSME1Q06323 249 aa18.3■□□□□ 0.52
SSH2-205ENST00000577483 TRIM26Q12899 539 aaPredicted RBP18.3■□□□□ 0.52
SSH2-205ENST00000577483 FNBP4Q8N3X1 1017 aaPredicted RBP18.3■□□□□ 0.52
SSH2-205ENST00000577483 QTRT2Q9H974 415 aaKnown RBP18.3■□□□□ 0.52
SSH2-205ENST00000577483 USP21Q9UK80 565 aa18.3■□□□□ 0.52
SSH2-205ENST00000577483 PHRF1Q9P1Y6 1649 aaKnown RBP18.3■□□□□ 0.52
SSH2-205ENST00000577483 ATRNO75882 1429 aa18.29■□□□□ 0.52
SSH2-205ENST00000577483 NRAPQ86VF7 1730 aa18.29■□□□□ 0.52
SSH2-205ENST00000577483 SLIT2O94813 1529 aa18.28■□□□□ 0.52
SSH2-205ENST00000577483 ARHGEF10O15013 1369 aa18.28■□□□□ 0.52
SSH2-205ENST00000577483 CABLES1Q8TDN4 633 aa18.27■□□□□ 0.52
SSH2-205ENST00000577483 GLI3P10071 1580 aa18.27■□□□□ 0.51
SSH2-205ENST00000577483 RBM6P78332 1123 aaKnown RBP18.27■□□□□ 0.51
SSH2-205ENST00000577483 NUDT16Q96DE0 195 aaKnown RBP18.27■□□□□ 0.51
SSH2-205ENST00000577483 CDK19Q9BWU1 502 aa18.27■□□□□ 0.51
SSH2-205ENST00000577483 BRWD3Q6RI45 1802 aa18.26■□□□□ 0.51
SSH2-205ENST00000577483 CENPJQ9HC77 1338 aaPredicted RBP18.26■□□□□ 0.51
SSH2-205ENST00000577483 GPRASP1Q5JY77 1395 aa18.25■□□□□ 0.51
SSH2-205ENST00000577483 PLEKHG5O94827 1062 aa18.25■□□□□ 0.51
SSH2-205ENST00000577483 LMOD2Q6P5Q4 547 aa18.25■□□□□ 0.51
SSH2-205ENST00000577483 COL14A1Q05707 1796 aaKnown RBP18.24■□□□□ 0.51
SSH2-205ENST00000577483 TRPC5Q9UL62 973 aaPredicted RBP18.24■□□□□ 0.51
SSH2-205ENST00000577483 POLR3AO14802 1390 aaPredicted RBP18.23■□□□□ 0.51
SSH2-205ENST00000577483 ROCK2O75116 1388 aaKnown RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms