RNA–Protein interactions for RNA: ENST00000575113.1

RFWD3-208, Transcript of ring finger and WD repeat domain 3, human

TSL 3

Gene RFWD3, Length 706 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFWD3-208	ENST00000575113	TMEM132E	Q6IEE7	984 aa		31.93	■■■□□ 2.7
RFWD3-208	ENST00000575113	WAPL	Q7Z5K2	1190 aa		31.92	■■■□□ 2.7
RFWD3-208	ENST00000575113	ADAMTS2	O95450	1211 aa		31.91	■■■□□ 2.7
RFWD3-208	ENST00000575113	PIK3C2G	O75747	1445 aa		31.91	■■■□□ 2.7
RFWD3-208	ENST00000575113	ABCC11	Q96J66	1382 aa		31.9	■■■□□ 2.7
RFWD3-208	ENST00000575113	TECPR2	O15040	1411 aa		31.9	■■■□□ 2.7
RFWD3-208	ENST00000575113	CDC42BPG	Q6DT37	1551 aa		31.9	■■■□□ 2.7
RFWD3-208	ENST00000575113	LAMC1	P11047	1609 aa		31.89	■■■□□ 2.7
RFWD3-208	ENST00000575113	NGLY1	Q96IV0	654 aa		31.88	■■■□□ 2.69
RFWD3-208	ENST00000575113	NPHP3	Q7Z494	1330 aa		31.88	■■■□□ 2.69
RFWD3-208	ENST00000575113	IFT172	Q9UG01	1749 aa		31.88	■■■□□ 2.69
RFWD3-208	ENST00000575113	RAB3GAP2	Q9H2M9	1393 aa		31.86	■■■□□ 2.69
RFWD3-208	ENST00000575113	NUTM2F	A1L443	756 aa		31.86	■■■□□ 2.69
RFWD3-208	ENST00000575113	QTRT2	Q9H974	415 aa	Known RBP	31.85	■■■□□ 2.69
RFWD3-208	ENST00000575113	YTHDC2	Q9H6S0	1430 aa	Known RBP	31.84	■■■□□ 2.69
RFWD3-208	ENST00000575113	PLEKHH1	Q9ULM0	1364 aa		31.82	■■■□□ 2.69
RFWD3-208	ENST00000575113	FOXO3	O43524	673 aa		31.82	■■■□□ 2.68
RFWD3-208	ENST00000575113	C14orf93	Q9H972	538 aa	Known RBP	31.82	■■■□□ 2.68
RFWD3-208	ENST00000575113	CDK12	Q9NYV4	1490 aa	Predicted RBP	31.82	■■■□□ 2.68
RFWD3-208	ENST00000575113	RBM6	P78332	1123 aa	Known RBP	31.8	■■■□□ 2.68
RFWD3-208	ENST00000575113	XPC	Q01831	940 aa	Predicted RBP	31.79	■■■□□ 2.68
RFWD3-208	ENST00000575113	DHX57	Q6P158	1386 aa	Known RBP	31.79	■■■□□ 2.68
RFWD3-208	ENST00000575113	CFAP70	Q5T0N1	1121 aa		31.78	■■■□□ 2.68
RFWD3-208	ENST00000575113	UPF1	Q92900	1129 aa	Known RBP eCLIP	31.78	■■■□□ 2.68
RFWD3-208	ENST00000575113	KNDC1	Q76NI1	1749 aa		31.78	■■■□□ 2.68
RFWD3-208	ENST00000575113	SIRT1	Q96EB6	747 aa		31.77	■■■□□ 2.68
RFWD3-208	ENST00000575113	MYOM2	P54296	1465 aa		31.77	■■■□□ 2.68
RFWD3-208	ENST00000575113	USP21	Q9UK80	565 aa		31.75	■■■□□ 2.67
RFWD3-208	ENST00000575113	PXDN	Q92626	1479 aa		31.74	■■■□□ 2.67
RFWD3-208	ENST00000575113	NRXN1	Q9ULB1	1477 aa		31.74	■■■□□ 2.67
RFWD3-208	ENST00000575113	COL22A1	Q8NFW1	1626 aa	Predicted RBP	31.7	■■■□□ 2.66
RFWD3-208	ENST00000575113	RGS12	O14924	1447 aa		31.69	■■■□□ 2.66
RFWD3-208	ENST00000575113	SAFB2	Q14151	953 aa	Known RBP eCLIP	31.69	■■■□□ 2.66
RFWD3-208	ENST00000575113	PRAM1	Q96QH2	718 aa		31.69	■■■□□ 2.66
RFWD3-208	ENST00000575113	TRPC5	Q9UL62	973 aa	Predicted RBP	31.69	■■■□□ 2.66
RFWD3-208	ENST00000575113	FNBP4	Q8N3X1	1017 aa	Predicted RBP	31.68	■■■□□ 2.66
RFWD3-208	ENST00000575113	POGK	Q9P215	609 aa		31.68	■■■□□ 2.66
RFWD3-208	ENST00000575113	FMN2	Q9NZ56	1722 aa		31.66	■■■□□ 2.66
RFWD3-208	ENST00000575113	KRT28	Q7Z3Y7	464 aa		31.64	■■■□□ 2.66
RFWD3-208	ENST00000575113	KDM2A	Q9Y2K7	1162 aa		31.64	■■■□□ 2.66
RFWD3-208	ENST00000575113	PHF8	Q9UPP1	1060 aa		31.63	■■■□□ 2.65
RFWD3-208	ENST00000575113	KIF1A	Q12756	1690 aa		31.62	■■■□□ 2.65
RFWD3-208	ENST00000575113	SPATA31A3	Q5VYP0	1347 aa		31.62	■■■□□ 2.65
RFWD3-208	ENST00000575113	DCAF11	Q8TEB1	546 aa		31.62	■■■□□ 2.65
RFWD3-208	ENST00000575113	HRC	P23327	699 aa		31.6	■■■□□ 2.65
RFWD3-208	ENST00000575113	PSME1	Q06323	249 aa		31.6	■■■□□ 2.65
RFWD3-208	ENST00000575113	TRAK1	Q9UPV9	953 aa		31.58	■■■□□ 2.65
RFWD3-208	ENST00000575113	ATRN	O75882	1429 aa		31.58	■■■□□ 2.65
RFWD3-208	ENST00000575113	HAP1	P54257	671 aa	Predicted RBP	31.57	■■■□□ 2.64
RFWD3-208	ENST00000575113	DLC1	Q96QB1	1528 aa		31.57	■■■□□ 2.64
RFWD3-208	ENST00000575113	STAC3	Q96MF2	364 aa		31.56	■■■□□ 2.64
RFWD3-208	ENST00000575113	BCL9L	Q86UU0	1499 aa		31.53	■■■□□ 2.64
RFWD3-208	ENST00000575113	LMOD2	Q6P5Q4	547 aa		31.53	■■■□□ 2.64
RFWD3-208	ENST00000575113	ATAD2	Q6PL18	1390 aa		31.53	■■■□□ 2.64
RFWD3-208	ENST00000575113	ADGRB1	O14514	1584 aa		31.52	■■■□□ 2.64
RFWD3-208	ENST00000575113	HIRIP3	Q9BW71	556 aa	Predicted RBP	31.52	■■■□□ 2.64
RFWD3-208	ENST00000575113	TNS3	Q68CZ2	1445 aa		31.51	■■■□□ 2.64
RFWD3-208	ENST00000575113	PLEKHG5	O94827	1062 aa		31.51	■■■□□ 2.63
RFWD3-208	ENST00000575113	ANKAR	Q7Z5J8	1434 aa		31.5	■■■□□ 2.63
RFWD3-208	ENST00000575113	PMFBP1	Q8TBY8	1022 aa		31.5	■■■□□ 2.63
RFWD3-208	ENST00000575113	MINK1	Q8N4C8	1332 aa	Predicted RBP	31.49	■■■□□ 2.63
RFWD3-208	ENST00000575113	SBNO1	A3KN83	1393 aa		31.48	■■■□□ 2.63
RFWD3-208	ENST00000575113	GJD4	Q96KN9	370 aa	Predicted RBP	31.48	■■■□□ 2.63
RFWD3-208	ENST00000575113	MARF1	Q9Y4F3	1742 aa	Known RBP	31.48	■■■□□ 2.63
RFWD3-208	ENST00000575113	UNC5CL	Q8IV45	518 aa		31.47	■■■□□ 2.63
RFWD3-208	ENST00000575113	ARHGEF10	O15013	1369 aa		31.46	■■■□□ 2.63
RFWD3-208	ENST00000575113	EIF3A	Q14152	1382 aa	Known RBP	31.46	■■■□□ 2.63
RFWD3-208	ENST00000575113	RGPD8	O14715	1765 aa	Predicted RBP	31.46	■■■□□ 2.63
RFWD3-208	ENST00000575113	CABLES1	Q8TDN4	633 aa		31.46	■■■□□ 2.63
RFWD3-208	ENST00000575113	ADGRB2	O60241	1585 aa		31.45	■■■□□ 2.63
RFWD3-208	ENST00000575113	SLIT2	O94813	1529 aa		31.42	■■■□□ 2.62
RFWD3-208	ENST00000575113	USP32	Q8NFA0	1604 aa		31.42	■■■□□ 2.62
RFWD3-208	ENST00000575113	WASL	O00401	505 aa	Predicted RBP	31.41	■■■□□ 2.62
RFWD3-208	ENST00000575113	GPRASP1	Q5JY77	1395 aa		31.41	■■■□□ 2.62
RFWD3-208	ENST00000575113	PRR36	Q9H6K5	1346 aa		31.37	■■■□□ 2.61
RFWD3-208	ENST00000575113	TULP4	Q9NRJ4	1543 aa		31.36	■■■□□ 2.61
RFWD3-208	ENST00000575113	RALGAPB	Q86X10	1494 aa		31.36	■■■□□ 2.61
RFWD3-208	ENST00000575113	NGDN	Q8NEJ9	315 aa	Known RBP	31.36	■■■□□ 2.61
RFWD3-208	ENST00000575113	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	31.35	■■■□□ 2.61
RFWD3-208	ENST00000575113	CCDC9	Q9Y3X0	531 aa	Known RBP	31.35	■■■□□ 2.61
RFWD3-208	ENST00000575113	VPS72	Q15906	364 aa		31.31	■■■□□ 2.6
RFWD3-208	ENST00000575113	PAK3	O75914	559 aa	Predicted RBP	31.3	■■■□□ 2.6
RFWD3-208	ENST00000575113	CCDC125	Q86Z20	511 aa		31.3	■■■□□ 2.6
RFWD3-208	ENST00000575113	GLI3	P10071	1580 aa		31.29	■■■□□ 2.6
RFWD3-208	ENST00000575113	FAM83G	A6ND36	823 aa		31.28	■■■□□ 2.6
RFWD3-208	ENST00000575113	NUDT16	Q96DE0	195 aa	Known RBP	31.27	■■■□□ 2.6
RFWD3-208	ENST00000575113	ARHGEF28	Q8N1W1	1705 aa	Known RBP	31.25	■■■□□ 2.59
RFWD3-208	ENST00000575113	SEPT12	Q8IYM1	358 aa		31.25	■■■□□ 2.59
RFWD3-208	ENST00000575113	ABCA3	Q99758	1704 aa		31.24	■■■□□ 2.59
RFWD3-208	ENST00000575113	TRPM3	Q9HCF6	1732 aa	Predicted RBP	31.24	■■■□□ 2.59
RFWD3-208	ENST00000575113	CDK19	Q9BWU1	502 aa		31.24	■■■□□ 2.59
RFWD3-208	ENST00000575113	PLCH1	Q4KWH8	1693 aa		31.23	■■■□□ 2.59
RFWD3-208	ENST00000575113	NWD2	Q9ULI1	1742 aa		31.22	■■■□□ 2.59
RFWD3-208	ENST00000575113	BTG4	Q9NY30	223 aa		31.22	■■■□□ 2.59
RFWD3-208	ENST00000575113	ATP7B	P35670	1465 aa		31.21	■■■□□ 2.59
RFWD3-208	ENST00000575113		A0A0G2JS52	829 aa		31.21	■■■□□ 2.59
RFWD3-208	ENST00000575113	MYT1	Q01538	1121 aa		31.21	■■■□□ 2.59
RFWD3-208	ENST00000575113	ALS2	Q96Q42	1657 aa		31.19	■■■□□ 2.58
RFWD3-208	ENST00000575113	NBPF1	Q3BBV0	1214 aa		31.19	■■■□□ 2.58
RFWD3-208	ENST00000575113	ZRANB1	Q9UGI0	708 aa		31.19	■■■□□ 2.58

Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms