RNA–Protein interactions for RNA: ENST00000574875.1

ABR-231, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 2

Gene ABR, Length 239 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-231	ENST00000574875	RGS17	Q9UGC6	210 aa	Predicted RBP	28.37	■■■□□ 2.13
ABR-231	ENST00000574875	DDX17	Q92841	729 aa	Known RBP	28.36	■■■□□ 2.13
ABR-231	ENST00000574875	LRRC59	Q96AG4	307 aa	Known RBP	28.35	■■■□□ 2.13
ABR-231	ENST00000574875	SPATA31A6	Q5VVP1	1343 aa		28.35	■■■□□ 2.13
ABR-231	ENST00000574875	PLEKHH1	Q9ULM0	1364 aa		28.35	■■■□□ 2.13
ABR-231	ENST00000574875	KNDC1	Q76NI1	1749 aa		28.35	■■■□□ 2.13
ABR-231	ENST00000574875	LAMC1	P11047	1609 aa		28.34	■■■□□ 2.13
ABR-231	ENST00000574875	NHSL1	Q5SYE7	1610 aa		28.32	■■■□□ 2.12
ABR-231	ENST00000574875	ESCO1	Q5FWF5	840 aa		28.3	■■■□□ 2.12
ABR-231	ENST00000574875	CDC42BPG	Q6DT37	1551 aa		28.28	■■■□□ 2.12
ABR-231	ENST00000574875	NUTM2F	A1L443	756 aa		28.28	■■■□□ 2.12
ABR-231	ENST00000574875	SHPRH	Q149N8	1683 aa		28.28	■■■□□ 2.12
ABR-231	ENST00000574875	PRAM1	Q96QH2	718 aa		28.27	■■■□□ 2.12
ABR-231	ENST00000574875	NUTM2B	A6NNL0	878 aa	Predicted RBP	28.26	■■■□□ 2.11
ABR-231	ENST00000574875	NUTM2E	B1AL46	878 aa	Predicted RBP	28.26	■■■□□ 2.11
ABR-231	ENST00000574875	MEX3C	Q5U5Q3	659 aa	Known RBP	28.26	■■■□□ 2.11
ABR-231	ENST00000574875	NUTM2A	Q8IVF1	878 aa	Predicted RBP	28.26	■■■□□ 2.11
ABR-231	ENST00000574875	PCGF6	Q9BYE7	350 aa		28.26	■■■□□ 2.11
ABR-231	ENST00000574875	POGK	Q9P215	609 aa		28.26	■■■□□ 2.11
ABR-231	ENST00000574875	SAFB2	Q14151	953 aa	Known RBP eCLIP	28.25	■■■□□ 2.11
ABR-231	ENST00000574875	TRAK1	Q9UPV9	953 aa		28.25	■■■□□ 2.11
ABR-231	ENST00000574875	SOS2	Q07890	1332 aa	Predicted RBP	28.24	■■■□□ 2.11
ABR-231	ENST00000574875	POTEA	Q6S8J7	498 aa		28.23	■■■□□ 2.11
ABR-231	ENST00000574875	LRP6	O75581	1613 aa		28.22	■■■□□ 2.11
ABR-231	ENST00000574875	ADGRB1	O14514	1584 aa		28.22	■■■□□ 2.11
ABR-231	ENST00000574875	DLC1	Q96QB1	1528 aa		28.2	■■■□□ 2.1
ABR-231	ENST00000574875	FOXO3	O43524	673 aa		28.2	■■■□□ 2.1
ABR-231	ENST00000574875	NPHP3	Q7Z494	1330 aa		28.19	■■■□□ 2.1
ABR-231	ENST00000574875	PNPLA6	Q8IY17	1366 aa		28.19	■■■□□ 2.1
ABR-231	ENST00000574875	FMN2	Q9NZ56	1722 aa		28.17	■■■□□ 2.1
ABR-231	ENST00000574875	SIN3A	Q96ST3	1273 aa		28.14	■■■□□ 2.1
ABR-231	ENST00000574875	XPC	Q01831	940 aa	Predicted RBP	28.13	■■■□□ 2.09
ABR-231	ENST00000574875	ZNF772	Q68DY9	489 aa	Predicted RBP	28.13	■■■□□ 2.09
ABR-231	ENST00000574875	HIRIP3	Q9BW71	556 aa	Predicted RBP	28.11	■■■□□ 2.09
ABR-231	ENST00000574875	MINK1	Q8N4C8	1332 aa	Predicted RBP	28.11	■■■□□ 2.09
ABR-231	ENST00000574875	NEUROD1	Q13562	356 aa		28.1	■■■□□ 2.09
ABR-231	ENST00000574875	L3MBTL2	Q969R5	705 aa		28.1	■■■□□ 2.09
ABR-231	ENST00000574875	PHF8	Q9UPP1	1060 aa		28.1	■■■□□ 2.09
ABR-231	ENST00000574875	RGPD8	O14715	1765 aa	Predicted RBP	28.09	■■■□□ 2.09
ABR-231	ENST00000574875	PXDN	Q92626	1479 aa		28.08	■■■□□ 2.09
ABR-231	ENST00000574875	ADAMTS2	O95450	1211 aa		28.07	■■■□□ 2.08
ABR-231	ENST00000574875	NBPF1	Q3BBV0	1214 aa		28.07	■■■□□ 2.08
ABR-231	ENST00000574875	KRT28	Q7Z3Y7	464 aa		28.07	■■■□□ 2.08
ABR-231	ENST00000574875	C8orf37	Q96NL8	207 aa		28.06	■■■□□ 2.08
ABR-231	ENST00000574875	WASL	O00401	505 aa	Predicted RBP	28.05	■■■□□ 2.08
ABR-231	ENST00000574875	AFF2	P51816	1311 aa		28.05	■■■□□ 2.08
ABR-231	ENST00000574875	KIAA1210	Q9ULL0	1709 aa		28.05	■■■□□ 2.08
ABR-231	ENST00000574875	KIF1A	Q12756	1690 aa		28.04	■■■□□ 2.08
ABR-231	ENST00000574875	PSME1	Q06323	249 aa		28.03	■■■□□ 2.08
ABR-231	ENST00000574875	NGLY1	Q96IV0	654 aa		28.03	■■■□□ 2.08
ABR-231	ENST00000574875	ADGRB2	O60241	1585 aa		28.03	■■■□□ 2.08
ABR-231	ENST00000574875	ANKAR	Q7Z5J8	1434 aa		28.02	■■■□□ 2.08
ABR-231	ENST00000574875	PMFBP1	Q8TBY8	1022 aa		28.02	■■■□□ 2.08
ABR-231	ENST00000574875	SPATA31A3	Q5VYP0	1347 aa		28.01	■■■□□ 2.07
ABR-231	ENST00000574875	EIF3A	Q14152	1382 aa	Known RBP	28	■■■□□ 2.07
ABR-231	ENST00000574875	ARHGEF28	Q8N1W1	1705 aa	Known RBP	28	■■■□□ 2.07
ABR-231	ENST00000574875	COL22A1	Q8NFW1	1626 aa	Predicted RBP	27.99	■■■□□ 2.07
ABR-231	ENST00000574875	PRR36	Q9H6K5	1346 aa		27.97	■■■□□ 2.07
ABR-231	ENST00000574875	USP32	Q8NFA0	1604 aa		27.97	■■■□□ 2.07
ABR-231	ENST00000574875	RXRB	P28702	533 aa		27.97	■■■□□ 2.07
ABR-231	ENST00000574875	QTRT2	Q9H974	415 aa	Known RBP	27.96	■■■□□ 2.07
ABR-231	ENST00000574875	CDK19	Q9BWU1	502 aa		27.94	■■■□□ 2.06
ABR-231	ENST00000574875	TULP4	Q9NRJ4	1543 aa		27.93	■■■□□ 2.06
ABR-231	ENST00000574875	NUDT16	Q96DE0	195 aa	Known RBP	27.93	■■■□□ 2.06
ABR-231	ENST00000574875	SBNO1	A3KN83	1393 aa		27.92	■■■□□ 2.06
ABR-231	ENST00000574875	LMOD2	Q6P5Q4	547 aa		27.91	■■■□□ 2.06
ABR-231	ENST00000574875	FNBP4	Q8N3X1	1017 aa	Predicted RBP	27.91	■■■□□ 2.06
ABR-231	ENST00000574875	USP21	Q9UK80	565 aa		27.91	■■■□□ 2.06
ABR-231	ENST00000574875	NGDN	Q8NEJ9	315 aa	Known RBP	27.9	■■■□□ 2.06
ABR-231	ENST00000574875	TNS3	Q68CZ2	1445 aa		27.89	■■■□□ 2.06
ABR-231	ENST00000574875	CENPJ	Q9HC77	1338 aa	Predicted RBP	27.89	■■■□□ 2.05
ABR-231	ENST00000574875	GPRASP1	Q5JY77	1395 aa		27.88	■■■□□ 2.05
ABR-231	ENST00000574875	RBM6	P78332	1123 aa	Known RBP	27.87	■■■□□ 2.05
ABR-231	ENST00000574875	PLEKHG5	O94827	1062 aa		27.85	■■■□□ 2.05
ABR-231	ENST00000574875	HAP1	P54257	671 aa	Predicted RBP	27.85	■■■□□ 2.05
ABR-231	ENST00000574875	CABLES1	Q8TDN4	633 aa		27.85	■■■□□ 2.05
ABR-231	ENST00000574875	ARHGEF10	O15013	1369 aa		27.85	■■■□□ 2.05
ABR-231	ENST00000574875	CCDC61	Q9Y6R9	512 aa		27.84	■■■□□ 2.05
ABR-231	ENST00000574875	NBPF8	Q3BBV2	869 aa		27.83	■■■□□ 2.05
ABR-231	ENST00000574875	TRPC5	Q9UL62	973 aa	Predicted RBP	27.83	■■■□□ 2.05
ABR-231	ENST00000574875	ATP7B	P35670	1465 aa		27.83	■■■□□ 2.04
ABR-231	ENST00000574875	TRPM1	Q7Z4N2	1603 aa		27.82	■■■□□ 2.04
ABR-231	ENST00000574875	MARF1	Q9Y4F3	1742 aa	Known RBP	27.82	■■■□□ 2.04
ABR-231	ENST00000574875	ROCK2	O75116	1388 aa	Known RBP	27.82	■■■□□ 2.04
ABR-231	ENST00000574875	PAK3	O75914	559 aa	Predicted RBP	27.8	■■■□□ 2.04
ABR-231	ENST00000574875	SRPK2	P78362	688 aa	Known RBP	27.8	■■■□□ 2.04
ABR-231	ENST00000574875	CDK12	Q9NYV4	1490 aa	Predicted RBP	27.8	■■■□□ 2.04
ABR-231	ENST00000574875	ITSN1	Q15811	1721 aa		27.79	■■■□□ 2.04
ABR-231	ENST00000574875	TONSL	Q96HA7	1378 aa		27.79	■■■□□ 2.04
ABR-231	ENST00000574875	PLEKHG3	A1L390	1219 aa		27.78	■■■□□ 2.04
ABR-231	ENST00000574875	TRPM3	Q9HCF6	1732 aa	Predicted RBP	27.78	■■■□□ 2.04
ABR-231	ENST00000574875	CABP2	Q9NPB3	220 aa		27.77	■■■□□ 2.04
ABR-231	ENST00000574875	BCL9L	Q86UU0	1499 aa		27.76	■■■□□ 2.04
ABR-231	ENST00000574875	ACE	P12821	1306 aa		27.76	■■■□□ 2.03
ABR-231	ENST00000574875	ATRN	O75882	1429 aa		27.75	■■■□□ 2.03
ABR-231	ENST00000574875	UNC5CL	Q8IV45	518 aa		27.74	■■■□□ 2.03
ABR-231	ENST00000574875	QRICH2	Q9H0J4	1663 aa		27.74	■■■□□ 2.03
ABR-231	ENST00000574875	POLR3A	O14802	1390 aa	Predicted RBP	27.73	■■■□□ 2.03
ABR-231	ENST00000574875	ALS2	Q96Q42	1657 aa		27.72	■■■□□ 2.03
ABR-231	ENST00000574875	EVC2	Q86UK5	1308 aa		27.71	■■■□□ 2.03

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