RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 NLRP13Q86W25 1043 aa38.6■■■■□ 3.77
CTDNEP1-210ENST00000574322 TULP4Q9NRJ4 1543 aa38.6■■■■□ 3.77
CTDNEP1-210ENST00000574322 AMER1Q5JTC6 1135 aaPredicted RBP38.6■■■■□ 3.77
CTDNEP1-210ENST00000574322 EVC2Q86UK5 1308 aa38.58■■■■□ 3.77
CTDNEP1-210ENST00000574322 FAM9BQ8IZU0 186 aa38.58■■■■□ 3.77
CTDNEP1-210ENST00000574322 HNRNPUQ00839 825 aaKnown RBP eCLIP38.58■■■■□ 3.77
CTDNEP1-210ENST00000574322 TMC1Q8TDI8 760 aa38.58■■■■□ 3.77
CTDNEP1-210ENST00000574322 PNISRQ8TF01 805 aaKnown RBP38.57■■■■□ 3.76
CTDNEP1-210ENST00000574322 LRPPRCP42704 1394 aaKnown RBP38.57■■■■□ 3.76
CTDNEP1-210ENST00000574322 DMRT2Q9Y5R5 561 aa38.56■■■■□ 3.76
CTDNEP1-210ENST00000574322 SLC26A8Q96RN1 970 aa38.55■■■■□ 3.76
CTDNEP1-210ENST00000574322 CC2D1BQ5T0F9 858 aaKnown RBP38.54■■■■□ 3.76
CTDNEP1-210ENST00000574322 STK26Q9P289 416 aa38.54■■■■□ 3.76
CTDNEP1-210ENST00000574322 ABCC11Q96J66 1382 aa38.53■■■■□ 3.76
CTDNEP1-210ENST00000574322 ADAMTS13Q76LX8 1427 aa38.5■■■■□ 3.75
CTDNEP1-210ENST00000574322 PRAM1Q96QH2 718 aa38.47■■■■□ 3.75
CTDNEP1-210ENST00000574322 TBX22Q9Y458 520 aa38.46■■■■□ 3.75
CTDNEP1-210ENST00000574322 CARD14Q9BXL6 1004 aa38.45■■■■□ 3.75
CTDNEP1-210ENST00000574322 KNDC1Q76NI1 1749 aa38.44■■■■□ 3.74
CTDNEP1-210ENST00000574322 NINLQ9Y2I6 1382 aa38.44■■■■□ 3.74
CTDNEP1-210ENST00000574322 POGKQ9P215 609 aa38.43■■■■□ 3.74
CTDNEP1-210ENST00000574322 ZBED9Q6R2W3 1325 aa38.42■■■■□ 3.74
CTDNEP1-210ENST00000574322 SIRT1Q96EB6 747 aa38.42■■■■□ 3.74
CTDNEP1-210ENST00000574322 DIP2AQ14689 1571 aa38.42■■■■□ 3.74
CTDNEP1-210ENST00000574322 TECPR2O15040 1411 aa38.42■■■■□ 3.74
CTDNEP1-210ENST00000574322 METP08581 1390 aa38.42■■■■□ 3.74
CTDNEP1-210ENST00000574322 USP32Q8NFA0 1604 aa38.41■■■■□ 3.74
CTDNEP1-210ENST00000574322 SLC12A5Q9H2X9 1139 aa38.38■■■■□ 3.74
CTDNEP1-210ENST00000574322 INSRP06213 1382 aa38.38■■■■□ 3.73
CTDNEP1-210ENST00000574322 ATAD2Q6PL18 1390 aa38.37■■■■□ 3.73
CTDNEP1-210ENST00000574322 FAM135BQ49AJ0 1406 aa38.36■■■■□ 3.73
CTDNEP1-210ENST00000574322 SAFB2Q14151 953 aaKnown RBP eCLIP38.36■■■■□ 3.73
CTDNEP1-210ENST00000574322 ANKRD36BQ8N2N9 1353 aa38.35■■■■□ 3.73
CTDNEP1-210ENST00000574322 PPP2R1AP30153 589 aa38.34■■■■□ 3.73
CTDNEP1-210ENST00000574322 CPS1P31327 1500 aa38.34■■■■□ 3.73
CTDNEP1-210ENST00000574322 CABP2Q9NPB3 220 aa38.32■■■■□ 3.73
CTDNEP1-210ENST00000574322 MINK1Q8N4C8 1332 aaPredicted RBP38.32■■■■□ 3.73
CTDNEP1-210ENST00000574322 PIK3R4Q99570 1358 aa38.31■■■■□ 3.72
CTDNEP1-210ENST00000574322 NSD3Q9BZ95 1437 aa38.31■■■■□ 3.72
CTDNEP1-210ENST00000574322 SRPK2P78362 688 aaKnown RBP38.26■■■■□ 3.72
CTDNEP1-210ENST00000574322 PLEKHH1Q9ULM0 1364 aa38.26■■■■□ 3.72
CTDNEP1-210ENST00000574322 ZNF335Q9H4Z2 1342 aaPredicted RBP38.25■■■■□ 3.71
CTDNEP1-210ENST00000574322 PTPRUQ92729 1446 aa38.24■■■■□ 3.71
CTDNEP1-210ENST00000574322 KCNA6P17658 529 aa38.24■■■■□ 3.71
CTDNEP1-210ENST00000574322 WAPLQ7Z5K2 1190 aa38.24■■■■□ 3.71
CTDNEP1-210ENST00000574322 CDK19Q9BWU1 502 aa38.24■■■■□ 3.71
CTDNEP1-210ENST00000574322 AMOTL2Q9Y2J4 779 aa38.24■■■■□ 3.71
CTDNEP1-210ENST00000574322 NSD2O96028 1365 aa38.21■■■■□ 3.71
CTDNEP1-210ENST00000574322 CGNL1Q0VF96 1302 aa38.2■■■■□ 3.71
CTDNEP1-210ENST00000574322 CHD2O14647 1828 aaKnown RBP38.17■■■■□ 3.7
CTDNEP1-210ENST00000574322 CD163L1Q9NR16 1453 aa38.17■■■■□ 3.7
CTDNEP1-210ENST00000574322 A0A1W2PP64 1363 aa38.16■■■■□ 3.7
CTDNEP1-210ENST00000574322 BLMP54132 1417 aaPredicted RBP38.15■■■■□ 3.7
CTDNEP1-210ENST00000574322 NWD1Q149M9 1564 aa38.14■■■■□ 3.7
CTDNEP1-210ENST00000574322 TERF2IPQ9NYB0 399 aa38.14■■■■□ 3.7
CTDNEP1-210ENST00000574322 WASLO00401 505 aaPredicted RBP38.12■■■■□ 3.69
CTDNEP1-210ENST00000574322 ROBO2Q9HCK4 1378 aa38.11■■■■□ 3.69
CTDNEP1-210ENST00000574322 XRN1Q8IZH2 1706 aaKnown RBP38.11■■■■□ 3.69
CTDNEP1-210ENST00000574322 ADGRB2O60241 1585 aa38.1■■■■□ 3.69
CTDNEP1-210ENST00000574322 ATP7BP35670 1465 aa38.09■■■■□ 3.69
CTDNEP1-210ENST00000574322 STRCP1A6NGW2 1772 aa38.09■■■■□ 3.69
CTDNEP1-210ENST00000574322 NKTRP30414 1462 aaKnown RBP38.08■■■■□ 3.69
CTDNEP1-210ENST00000574322 MORC1Q86VD1 984 aa38.07■■■■□ 3.69
CTDNEP1-210ENST00000574322 PTCH1Q13635 1447 aa38.06■■■■□ 3.68
CTDNEP1-210ENST00000574322 POLR3AO14802 1390 aaPredicted RBP38.05■■■■□ 3.68
CTDNEP1-210ENST00000574322 PROSER2Q86WR7 435 aaPredicted RBP38.05■■■■□ 3.68
CTDNEP1-210ENST00000574322 HDGFL2Q7Z4V5 671 aaPredicted RBP38.04■■■■□ 3.68
CTDNEP1-210ENST00000574322 CABP1Q9NZU7 370 aa38.03■■■■□ 3.68
CTDNEP1-210ENST00000574322 SMG6Q86US8 1419 aaKnown RBP38.03■■■■□ 3.68
CTDNEP1-210ENST00000574322 LTBP4Q8N2S1 1624 aa38.01■■■■□ 3.68
CTDNEP1-210ENST00000574322 SIPA1L2Q9P2F8 1722 aaPredicted RBP38.01■■■■□ 3.67
CTDNEP1-210ENST00000574322 ANKRD26Q9UPS8 1709 aa38.01■■■■□ 3.67
CTDNEP1-210ENST00000574322 RBM33Q96EV2 1170 aaKnown RBP38■■■■□ 3.67
CTDNEP1-210ENST00000574322 ADAMTS8Q9UP79 889 aa38■■■■□ 3.67
CTDNEP1-210ENST00000574322 WDR43Q15061 677 aaKnown RBP eCLIP37.98■■■■□ 3.67
CTDNEP1-210ENST00000574322 CPSF1Q10570 1443 aaKnown RBP37.97■■■■□ 3.67
CTDNEP1-210ENST00000574322 TMEM94Q12767 1356 aa37.96■■■■□ 3.67
CTDNEP1-210ENST00000574322 SUPT16HQ9Y5B9 1047 aaKnown RBP37.96■■■■□ 3.67
CTDNEP1-210ENST00000574322 LRRC7Q96NW7 1537 aa37.96■■■■□ 3.67
CTDNEP1-210ENST00000574322 PPIP5K1Q6PFW1 1433 aa37.93■■■■□ 3.66
CTDNEP1-210ENST00000574322 NUDT16Q96DE0 195 aaKnown RBP37.93■■■■□ 3.66
CTDNEP1-210ENST00000574322 CCDC61Q9Y6R9 512 aa37.92■■■■□ 3.66
CTDNEP1-210ENST00000574322 CDC42BPGQ6DT37 1551 aa37.91■■■■□ 3.66
CTDNEP1-210ENST00000574322 FYB1O15117 783 aa37.91■■■■□ 3.66
CTDNEP1-210ENST00000574322 C14orf37Q86TY3 774 aa37.91■■■■□ 3.66
CTDNEP1-210ENST00000574322 PDE3BQ13370 1112 aa37.9■■■■□ 3.66
CTDNEP1-210ENST00000574322 NUDCQ9Y266 331 aa37.9■■■■□ 3.66
CTDNEP1-210ENST00000574322 KIF20BQ96Q89 1820 aa37.9■■■■□ 3.66
CTDNEP1-210ENST00000574322 NEFLP07196 543 aa37.88■■■■□ 3.65
CTDNEP1-210ENST00000574322 NCOA3Q9Y6Q9 1424 aa37.87■■■■□ 3.65
CTDNEP1-210ENST00000574322 TOPAZ1Q8N9V7 1692 aa37.86■■■■□ 3.65
CTDNEP1-210ENST00000574322 EDC4Q6P2E9 1401 aaKnown RBP37.85■■■■□ 3.65
CTDNEP1-210ENST00000574322 SHPRHQ149N8 1683 aa37.85■■■■□ 3.65
CTDNEP1-210ENST00000574322 AKAP12Q02952 1782 aa37.84■■■■□ 3.65
CTDNEP1-210ENST00000574322 MON2Q7Z3U7 1717 aa37.84■■■■□ 3.65
CTDNEP1-210ENST00000574322 PRR36Q9H6K5 1346 aa37.84■■■■□ 3.65
CTDNEP1-210ENST00000574322 MTHFSP49914 203 aa37.82■■■■□ 3.65
CTDNEP1-210ENST00000574322 GGNBP2Q9H3C7 697 aa37.81■■■■□ 3.64
CTDNEP1-210ENST00000574322 ADGRL3Q9HAR2 1447 aa37.81■■■■□ 3.64
CTDNEP1-210ENST00000574322 TNNT2P45379 298 aaPredicted RBP37.81■■■■□ 3.64
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms