RNA–Protein interactions for RNA: ENST00000573550.5

CDC27-215, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-215ENST00000573550 SH3D19Q5HYK7 790 aa10.51□□□□□ -0.73
CDC27-215ENST00000573550 RIC3Q7Z5B4 369 aa10.51□□□□□ -0.73
CDC27-215ENST00000573550 IL27Q8NEV9 243 aa10.51□□□□□ -0.73
CDC27-215ENST00000573550 SYMPKQ92797 1274 aaKnown RBP10.5□□□□□ -0.73
CDC27-215ENST00000573550 PCDHB15Q9Y5E8 787 aa10.5□□□□□ -0.73
CDC27-215ENST00000573550 CLK2P49760 499 aaKnown RBP10.49□□□□□ -0.73
CDC27-215ENST00000573550 TUSC1Q2TAM9 212 aa10.49□□□□□ -0.73
CDC27-215ENST00000573550 FAM160A2Q8N612 972 aaPredicted RBP10.49□□□□□ -0.73
CDC27-215ENST00000573550 S1PR4O95977 384 aa10.48□□□□□ -0.73
CDC27-215ENST00000573550 MSS51Q4VC12 460 aa10.48□□□□□ -0.73
CDC27-215ENST00000573550 PPP1R18Q6NYC8 613 aa10.48□□□□□ -0.73
CDC27-215ENST00000573550 POLR3EQ9NVU0 708 aa10.48□□□□□ -0.73
CDC27-215ENST00000573550 SKIV2LQ15477 1246 aaKnown RBP10.47□□□□□ -0.73
CDC27-215ENST00000573550 USB1Q9BQ65 265 aaKnown RBP10.47□□□□□ -0.73
CDC27-215ENST00000573550 SLC6A16Q9GZN6 736 aa10.47□□□□□ -0.73
CDC27-215ENST00000573550 C6orf229H3BNL8 230 aa10.46□□□□□ -0.73
CDC27-215ENST00000573550 RETREG3Q86VR2 466 aa10.46□□□□□ -0.73
CDC27-215ENST00000573550 GOPCQ9HD26 462 aa10.46□□□□□ -0.73
CDC27-215ENST00000573550 PRDM9Q9NQV7 894 aa10.46□□□□□ -0.73
CDC27-215ENST00000573550 HRCP23327 699 aa10.45□□□□□ -0.74
CDC27-215ENST00000573550 MTMR2Q13614 643 aa10.45□□□□□ -0.74
CDC27-215ENST00000573550 QPCTQ16769 361 aa10.45□□□□□ -0.74
CDC27-215ENST00000573550 PRPF38BQ5VTL8 546 aaKnown RBP10.45□□□□□ -0.74
CDC27-215ENST00000573550 CSPP1Q1MSJ5 1256 aa10.44□□□□□ -0.74
CDC27-215ENST00000573550 CABLES1Q8TDN4 633 aa10.44□□□□□ -0.74
CDC27-215ENST00000573550 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.44□□□□□ -0.74
CDC27-215ENST00000573550 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.44□□□□□ -0.74
CDC27-215ENST00000573550 RNF223E7ERA6 249 aa10.43□□□□□ -0.74
CDC27-215ENST00000573550 LILRB3O75022 631 aa10.43□□□□□ -0.74
CDC27-215ENST00000573550 PROCA1Q8NCQ7 364 aaPredicted RBP10.43□□□□□ -0.74
CDC27-215ENST00000573550 ZBTB3Q9H5J0 574 aa10.43□□□□□ -0.74
CDC27-215ENST00000573550 SPDYE5A6NIY4 337 aa10.42□□□□□ -0.74
CDC27-215ENST00000573550 GGCXP38435 758 aa10.42□□□□□ -0.74
CDC27-215ENST00000573550 MMP16P51512 607 aa10.42□□□□□ -0.74
CDC27-215ENST00000573550 DXOO77932 396 aaKnown RBP10.41□□□□□ -0.74
CDC27-215ENST00000573550 FBXO31Q5XUX0 539 aaPredicted RBP10.41□□□□□ -0.74
CDC27-215ENST00000573550 PPEF1O14829 653 aaPredicted RBP10.4□□□□□ -0.74
CDC27-215ENST00000573550 PRR7Q8TB68 274 aa10.4□□□□□ -0.74
CDC27-215ENST00000573550 CFAP99D6REC4 459 aa10.39□□□□□ -0.75
CDC27-215ENST00000573550 ANKLE1Q8NAG6 615 aa10.39□□□□□ -0.75
CDC27-215ENST00000573550 JUNDP17535 347 aa10.38□□□□□ -0.75
CDC27-215ENST00000573550 RTL5Q5HYW3 569 aaPredicted RBP10.37□□□□□ -0.75
CDC27-215ENST00000573550 DESI1Q6ICB0 168 aa10.37□□□□□ -0.75
CDC27-215ENST00000573550 PCMTD1Q96MG8 357 aaPredicted RBP10.37□□□□□ -0.75
CDC27-215ENST00000573550 FCF1Q9Y324 198 aaKnown RBP10.37□□□□□ -0.75
CDC27-215ENST00000573550 NUTM2BA6NNL0 878 aaPredicted RBP10.36□□□□□ -0.75
CDC27-215ENST00000573550 NUTM2EB1AL46 878 aaPredicted RBP10.36□□□□□ -0.75
CDC27-215ENST00000573550 NUTM2DQ5VT03 806 aaPredicted RBP10.36□□□□□ -0.75
CDC27-215ENST00000573550 PPP2R2DQ66LE6 453 aa10.36□□□□□ -0.75
CDC27-215ENST00000573550 NUTM2AQ8IVF1 878 aaPredicted RBP10.36□□□□□ -0.75
CDC27-215ENST00000573550 PLA2G2CQ5R387 149 aa10.35□□□□□ -0.75
CDC27-215ENST00000573550 EMID1Q96A84 441 aaPredicted RBP10.35□□□□□ -0.75
CDC27-215ENST00000573550 RGS20O76081 388 aa10.33□□□□□ -0.76
CDC27-215ENST00000573550 PTPRNQ16849 979 aa10.32□□□□□ -0.76
CDC27-215ENST00000573550 ATP1B4Q9UN42 357 aaPredicted RBP10.32□□□□□ -0.76
CDC27-215ENST00000573550 NUDT12Q9BQG2 462 aa10.31□□□□□ -0.76
CDC27-215ENST00000573550 LYPD8Q6UX82 237 aa10.3□□□□□ -0.76
CDC27-215ENST00000573550 PER1O15534 1290 aaPredicted RBP10.29□□□□□ -0.76
CDC27-215ENST00000573550 RFC5P40937 340 aa10.29□□□□□ -0.76
CDC27-215ENST00000573550 LIAT1Q6ZQX7 453 aa10.29□□□□□ -0.76
CDC27-215ENST00000573550 HELBQ8NG08 1087 aaPredicted RBP10.29□□□□□ -0.76
CDC27-215ENST00000573550 TSC1Q92574 1164 aa10.29□□□□□ -0.76
CDC27-215ENST00000573550 PRKD2Q9BZL6 878 aa10.29□□□□□ -0.76
CDC27-215ENST00000573550 CCNYL3P0C7X3 344 aa10.28□□□□□ -0.76
CDC27-215ENST00000573550 V9GY48 417 aaPredicted RBP10.28□□□□□ -0.76
CDC27-215ENST00000573550 CCDC24Q8N4L8 307 aa10.27□□□□□ -0.77
CDC27-215ENST00000573550 SLC19A1P41440 591 aa10.26□□□□□ -0.77
CDC27-215ENST00000573550 CTDSPL2Q05D32 466 aa10.26□□□□□ -0.77
CDC27-215ENST00000573550 EVA1BQ9NVM1 165 aa10.26□□□□□ -0.77
CDC27-215ENST00000573550 F12P00748 615 aaPredicted RBP10.25□□□□□ -0.77
CDC27-215ENST00000573550 TMEM132AQ24JP5 1023 aa10.25□□□□□ -0.77
CDC27-215ENST00000573550 PTCRAQ6ISU1 281 aaPredicted RBP10.25□□□□□ -0.77
CDC27-215ENST00000573550 AP1G2O75843 785 aa10.24□□□□□ -0.77
CDC27-215ENST00000573550 RPIAP49247 311 aa10.24□□□□□ -0.77
CDC27-215ENST00000573550 KCNH2Q12809 1159 aa10.23□□□□□ -0.77
CDC27-215ENST00000573550 SPRYD7Q5W111 196 aa10.23□□□□□ -0.77
CDC27-215ENST00000573550 MAP10Q9P2G4 905 aa10.23□□□□□ -0.77
CDC27-215ENST00000573550 LRRN4Q8WUT4 740 aa10.22□□□□□ -0.77
CDC27-215ENST00000573550 ZBTB24O43167 697 aaPredicted RBP10.21□□□□□ -0.77
CDC27-215ENST00000573550 USP17L8P0C7I0 530 aa10.21□□□□□ -0.77
CDC27-215ENST00000573550 TRIM32Q13049 653 aa10.21□□□□□ -0.77
CDC27-215ENST00000573550 TMEM259Q4ZIN3 620 aa10.21□□□□□ -0.77
CDC27-215ENST00000573550 UNC93B1Q9H1C4 597 aa10.21□□□□□ -0.77
CDC27-215ENST00000573550 CTHP32929 405 aa10.19□□□□□ -0.78
CDC27-215ENST00000573550 ZNF598Q86UK7 904 aaKnown RBP10.19□□□□□ -0.78
CDC27-215ENST00000573550 HMX1Q9NP08 348 aaPredicted RBP10.19□□□□□ -0.78
CDC27-215ENST00000573550 CD2BP2O95400 341 aaKnown RBP10.17□□□□□ -0.78
CDC27-215ENST00000573550 ZNF697Q5TEC3 545 aa10.17□□□□□ -0.78
CDC27-215ENST00000573550 SKOR1P84550 965 aa10.16□□□□□ -0.78
CDC27-215ENST00000573550 BANK1Q8NDB2 785 aa10.16□□□□□ -0.78
CDC27-215ENST00000573550 TRIM67Q6ZTA4 783 aa10.15□□□□□ -0.78
CDC27-215ENST00000573550 NR6A1Q15406 480 aa10.14□□□□□ -0.79
CDC27-215ENST00000573550 EPS8L1Q8TE68 723 aa10.14□□□□□ -0.79
CDC27-215ENST00000573550 WNT7BP56706 349 aa10.13□□□□□ -0.79
CDC27-215ENST00000573550 SH3BP2P78314 561 aa10.13□□□□□ -0.79
CDC27-215ENST00000573550 BAP1Q92560 729 aa10.13□□□□□ -0.79
CDC27-215ENST00000573550 TRIM34Q9BYJ4 488 aa10.13□□□□□ -0.79
CDC27-215ENST00000573550 PKD2L1Q9P0L9 805 aa10.13□□□□□ -0.79
CDC27-215ENST00000573550 SOCS7O14512 581 aa10.12□□□□□ -0.79
CDC27-215ENST00000573550 GDF9O60383 454 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms