RNA–Protein interactions for RNA: ENST00000573325.1

ABR-220, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 3

Gene ABR, Length 471 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-220ENST00000573325 CDC42BPGQ6DT37 1551 aa16.6■□□□□ 0.25
ABR-220ENST00000573325 ABCC11Q96J66 1382 aa16.59■□□□□ 0.25
ABR-220ENST00000573325 PLEKHH1Q9ULM0 1364 aa16.59■□□□□ 0.25
ABR-220ENST00000573325 PIK3C2GO75747 1445 aa16.59■□□□□ 0.25
ABR-220ENST00000573325 COL22A1Q8NFW1 1626 aaPredicted RBP16.59■□□□□ 0.25
ABR-220ENST00000573325 IFT172Q9UG01 1749 aa16.59■□□□□ 0.25
ABR-220ENST00000573325 FNBP4Q8N3X1 1017 aaPredicted RBP16.58■□□□□ 0.24
ABR-220ENST00000573325 MPHOSPH9Q99550 1183 aa16.58■□□□□ 0.24
ABR-220ENST00000573325 LRPPRCP42704 1394 aaKnown RBP16.58■□□□□ 0.24
ABR-220ENST00000573325 NRXN1Q9ULB1 1477 aa16.57■□□□□ 0.24
ABR-220ENST00000573325 WAPLQ7Z5K2 1190 aa16.56■□□□□ 0.24
ABR-220ENST00000573325 QTRT2Q9H974 415 aaKnown RBP16.56■□□□□ 0.24
ABR-220ENST00000573325 ANKRD30BQ9BXX2 1392 aa16.55■□□□□ 0.24
ABR-220ENST00000573325 C8orf37Q96NL8 207 aa16.55■□□□□ 0.24
ABR-220ENST00000573325 BCL9LQ86UU0 1499 aa16.54■□□□□ 0.24
ABR-220ENST00000573325 RBM6P78332 1123 aaKnown RBP16.54■□□□□ 0.24
ABR-220ENST00000573325 CCDC144AA2RUR9 1427 aa16.53■□□□□ 0.24
ABR-220ENST00000573325 ATRNO75882 1429 aa16.53■□□□□ 0.24
ABR-220ENST00000573325 TMEM132EQ6IEE7 984 aa16.53■□□□□ 0.24
ABR-220ENST00000573325 ADAMTS2O95450 1211 aa16.52■□□□□ 0.24
ABR-220ENST00000573325 SIRT1Q96EB6 747 aa16.52■□□□□ 0.24
ABR-220ENST00000573325 KNDC1Q76NI1 1749 aa16.51■□□□□ 0.23
ABR-220ENST00000573325 RGL3Q3MIN7 710 aa16.51■□□□□ 0.23
ABR-220ENST00000573325 C14orf93Q9H972 538 aaKnown RBP16.51■□□□□ 0.23
ABR-220ENST00000573325 YTHDC2Q9H6S0 1430 aaKnown RBP16.51■□□□□ 0.23
ABR-220ENST00000573325 FOXO3O43524 673 aa16.5■□□□□ 0.23
ABR-220ENST00000573325 NPHP3Q7Z494 1330 aa16.49■□□□□ 0.23
ABR-220ENST00000573325 ESCO1Q5FWF5 840 aa16.48■□□□□ 0.23
ABR-220ENST00000573325 NGLY1Q96IV0 654 aa16.48■□□□□ 0.23
ABR-220ENST00000573325 XPCQ01831 940 aaPredicted RBP16.47■□□□□ 0.23
ABR-220ENST00000573325 STK26Q9P289 416 aa16.47■□□□□ 0.23
ABR-220ENST00000573325 FMN2Q9NZ56 1722 aa16.47■□□□□ 0.23
ABR-220ENST00000573325 USP21Q9UK80 565 aa16.46■□□□□ 0.23
ABR-220ENST00000573325 SPATA31A3Q5VYP0 1347 aa16.45■□□□□ 0.22
ABR-220ENST00000573325 SLIT2O94813 1529 aa16.45■□□□□ 0.22
ABR-220ENST00000573325 CFAP70Q5T0N1 1121 aa16.45■□□□□ 0.22
ABR-220ENST00000573325 ADGRB1O14514 1584 aa16.45■□□□□ 0.22
ABR-220ENST00000573325 TRPC5Q9UL62 973 aaPredicted RBP16.44■□□□□ 0.22
ABR-220ENST00000573325 NUTM2FA1L443 756 aa16.43■□□□□ 0.22
ABR-220ENST00000573325 DLC1Q96QB1 1528 aa16.4■□□□□ 0.22
ABR-220ENST00000573325 RAB3GAP2Q9H2M9 1393 aa16.4■□□□□ 0.22
ABR-220ENST00000573325 MARF1Q9Y4F3 1742 aaKnown RBP16.4■□□□□ 0.22
ABR-220ENST00000573325 GLI3P10071 1580 aa16.4■□□□□ 0.22
ABR-220ENST00000573325 USP32Q8NFA0 1604 aa16.4■□□□□ 0.22
ABR-220ENST00000573325 GJD4Q96KN9 370 aaPredicted RBP16.39■□□□□ 0.21
ABR-220ENST00000573325 KIF1AQ12756 1690 aa16.38■□□□□ 0.21
ABR-220ENST00000573325 KRT28Q7Z3Y7 464 aa16.38■□□□□ 0.21
ABR-220ENST00000573325 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.38■□□□□ 0.21
ABR-220ENST00000573325 RALGAPBQ86X10 1494 aa16.37■□□□□ 0.21
ABR-220ENST00000573325 PRAM1Q96QH2 718 aa16.37■□□□□ 0.21
ABR-220ENST00000573325 ADGRB2O60241 1585 aa16.37■□□□□ 0.21
ABR-220ENST00000573325 PRR36Q9H6K5 1346 aa16.37■□□□□ 0.21
ABR-220ENST00000573325 SBNO1A3KN83 1393 aa16.37■□□□□ 0.21
ABR-220ENST00000573325 DHX57Q6P158 1386 aaKnown RBP16.37■□□□□ 0.21
ABR-220ENST00000573325 ATAD2Q6PL18 1390 aa16.37■□□□□ 0.21
ABR-220ENST00000573325 TNS3Q68CZ2 1445 aa16.36■□□□□ 0.21
ABR-220ENST00000573325 RGPD8O14715 1765 aaPredicted RBP16.36■□□□□ 0.21
ABR-220ENST00000573325 ONECUT3O60422 494 aaPredicted RBP16.36■□□□□ 0.21
ABR-220ENST00000573325 PHF8Q9UPP1 1060 aa16.36■□□□□ 0.21
ABR-220ENST00000573325 UNC5CLQ8IV45 518 aa16.35■□□□□ 0.21
ABR-220ENST00000573325 ACIN1Q9UKV3 1341 aaKnown RBP16.35■□□□□ 0.21
ABR-220ENST00000573325 ANKARQ7Z5J8 1434 aa16.35■□□□□ 0.21
ABR-220ENST00000573325 CABLES1Q8TDN4 633 aa16.34■□□□□ 0.21
ABR-220ENST00000573325 ABCA3Q99758 1704 aa16.32■□□□□ 0.2
ABR-220ENST00000573325 TRPM3Q9HCF6 1732 aaPredicted RBP16.32■□□□□ 0.2
ABR-220ENST00000573325 FAM83GA6ND36 823 aa16.31■□□□□ 0.2
ABR-220ENST00000573325 HRCP23327 699 aa16.31■□□□□ 0.2
ABR-220ENST00000573325 SAFB2Q14151 953 aaKnown RBP eCLIP16.3■□□□□ 0.2
ABR-220ENST00000573325 VPS72Q15906 364 aa16.3■□□□□ 0.2
ABR-220ENST00000573325 ALS2Q96Q42 1657 aa16.28■□□□□ 0.2
ABR-220ENST00000573325 CCDC125Q86Z20 511 aa16.27■□□□□ 0.2
ABR-220ENST00000573325 TRAK1Q9UPV9 953 aa16.27■□□□□ 0.2
ABR-220ENST00000573325 ARHGEF10O15013 1369 aa16.26■□□□□ 0.19
ABR-220ENST00000573325 BRWD3Q6RI45 1802 aa16.26■□□□□ 0.19
ABR-220ENST00000573325 TULP4Q9NRJ4 1543 aa16.26■□□□□ 0.19
ABR-220ENST00000573325 NWD2Q9ULI1 1742 aa16.26■□□□□ 0.19
ABR-220ENST00000573325 CRYBG1Q9Y4K1 1723 aa16.26■□□□□ 0.19
ABR-220ENST00000573325 PMFBP1Q8TBY8 1022 aa16.26■□□□□ 0.19
ABR-220ENST00000573325 PLCH1Q4KWH8 1693 aa16.25■□□□□ 0.19
ABR-220ENST00000573325 WASLO00401 505 aaPredicted RBP16.25■□□□□ 0.19
ABR-220ENST00000573325 PSME1Q06323 249 aa16.25■□□□□ 0.19
ABR-220ENST00000573325 HIRIP3Q9BW71 556 aaPredicted RBP16.25■□□□□ 0.19
ABR-220ENST00000573325 NRAPQ86VF7 1730 aa16.25■□□□□ 0.19
ABR-220ENST00000573325 ATP7BP35670 1465 aa16.24■□□□□ 0.19
ABR-220ENST00000573325 SEPT12Q8IYM1 358 aa16.24■□□□□ 0.19
ABR-220ENST00000573325 DCAF11Q8TEB1 546 aa16.24■□□□□ 0.19
ABR-220ENST00000573325 STAC3Q96MF2 364 aa16.24■□□□□ 0.19
ABR-220ENST00000573325 BLMP54132 1417 aaPredicted RBP16.24■□□□□ 0.19
ABR-220ENST00000573325 MINK1Q8N4C8 1332 aaPredicted RBP16.22■□□□□ 0.19
ABR-220ENST00000573325 POGKQ9P215 609 aa16.22■□□□□ 0.19
ABR-220ENST00000573325 DEFB132Q7Z7B7 95 aa16.21■□□□□ 0.19
ABR-220ENST00000573325 ARHGEF28Q8N1W1 1705 aaKnown RBP16.2■□□□□ 0.18
ABR-220ENST00000573325 KDM2AQ9Y2K7 1162 aa16.2■□□□□ 0.18
ABR-220ENST00000573325 POLR3AO14802 1390 aaPredicted RBP16.19■□□□□ 0.18
ABR-220ENST00000573325 SPATA31A5Q5VU36 1347 aa16.18■□□□□ 0.18
ABR-220ENST00000573325 SPATA31A7Q8IWB4 1347 aa16.18■□□□□ 0.18
ABR-220ENST00000573325 THSD7AQ9UPZ6 1657 aa16.17■□□□□ 0.18
ABR-220ENST00000573325 EIF3AQ14152 1382 aaKnown RBP16.16■□□□□ 0.18
ABR-220ENST00000573325 NBPF1Q3BBV0 1214 aa16.16■□□□□ 0.18
ABR-220ENST00000573325 NUDT16Q96DE0 195 aaKnown RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms