RNA–Protein interactions for RNA: ENST00000572298.5

TOM1L1-211, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1L1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-211ENST00000572298 ADGRB1O14514 1584 aa12.72□□□□□ -0.37
TOM1L1-211ENST00000572298 ADGRL3Q9HAR2 1447 aa12.71□□□□□ -0.37
TOM1L1-211ENST00000572298 ROCK2O75116 1388 aaKnown RBP12.71□□□□□ -0.37
TOM1L1-211ENST00000572298 DCAF8L1A6NGE4 600 aa12.71□□□□□ -0.37
TOM1L1-211ENST00000572298 HOXD11P31277 338 aaPredicted RBP12.71□□□□□ -0.37
TOM1L1-211ENST00000572298 PIP4K2BP78356 416 aa12.71□□□□□ -0.37
TOM1L1-211ENST00000572298 NBPF1Q3BBV0 1214 aa12.71□□□□□ -0.37
TOM1L1-211ENST00000572298 ASXL1Q8IXJ9 1541 aa12.71□□□□□ -0.38
TOM1L1-211ENST00000572298 DLC1Q96QB1 1528 aa12.71□□□□□ -0.38
TOM1L1-211ENST00000572298 KNDC1Q76NI1 1749 aa12.71□□□□□ -0.38
TOM1L1-211ENST00000572298 XIRP1Q702N8 1843 aaKnown RBP12.7□□□□□ -0.38
TOM1L1-211ENST00000572298 ILDR1Q86SU0 546 aaPredicted RBP12.7□□□□□ -0.38
TOM1L1-211ENST00000572298 NBPF8Q3BBV2 869 aa12.69□□□□□ -0.38
TOM1L1-211ENST00000572298 NCBP3Q53F19 620 aaKnown RBP12.68□□□□□ -0.38
TOM1L1-211ENST00000572298 CARD11Q9BXL7 1154 aa12.68□□□□□ -0.38
TOM1L1-211ENST00000572298 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.68□□□□□ -0.38
TOM1L1-211ENST00000572298 EIF3AQ14152 1382 aaKnown RBP12.68□□□□□ -0.38
TOM1L1-211ENST00000572298 SLC24A1O60721 1099 aa12.67□□□□□ -0.38
TOM1L1-211ENST00000572298 SAFB2Q14151 953 aaKnown RBP eCLIP12.67□□□□□ -0.38
TOM1L1-211ENST00000572298 GPRASP1Q5JY77 1395 aa12.67□□□□□ -0.38
TOM1L1-211ENST00000572298 PLEKHH1Q9ULM0 1364 aa12.66□□□□□ -0.38
TOM1L1-211ENST00000572298 CENPJQ9HC77 1338 aaPredicted RBP12.65□□□□□ -0.38
TOM1L1-211ENST00000572298 TRPM1Q7Z4N2 1603 aa12.65□□□□□ -0.38
TOM1L1-211ENST00000572298 RALGAPBQ86X10 1494 aa12.65□□□□□ -0.38
TOM1L1-211ENST00000572298 RNF39Q9H2S5 420 aa12.64□□□□□ -0.39
TOM1L1-211ENST00000572298 MINK1Q8N4C8 1332 aaPredicted RBP12.63□□□□□ -0.39
TOM1L1-211ENST00000572298 WASLO00401 505 aaPredicted RBP12.63□□□□□ -0.39
TOM1L1-211ENST00000572298 CDC42BPGQ6DT37 1551 aa12.63□□□□□ -0.39
TOM1L1-211ENST00000572298 MST1RQ04912 1400 aa12.62□□□□□ -0.39
TOM1L1-211ENST00000572298 NALCNQ8IZF0 1738 aa12.62□□□□□ -0.39
TOM1L1-211ENST00000572298 C1orf167Q5SNV9 1468 aa12.61□□□□□ -0.39
TOM1L1-211ENST00000572298 ESCO1Q5FWF5 840 aa12.61□□□□□ -0.39
TOM1L1-211ENST00000572298 BRINP3Q76B58 766 aa12.61□□□□□ -0.39
TOM1L1-211ENST00000572298 HIRIP3Q9BW71 556 aaPredicted RBP12.61□□□□□ -0.39
TOM1L1-211ENST00000572298 ARHGEF28Q8N1W1 1705 aaKnown RBP12.6□□□□□ -0.39
TOM1L1-211ENST00000572298 CNKSR2Q8WXI2 1034 aa12.6□□□□□ -0.39
TOM1L1-211ENST00000572298 EVC2Q86UK5 1308 aa12.6□□□□□ -0.39
TOM1L1-211ENST00000572298 NUTM2FA1L443 756 aa12.59□□□□□ -0.39
TOM1L1-211ENST00000572298 HSPA1LP34931 641 aa12.59□□□□□ -0.39
TOM1L1-211ENST00000572298 CDK19Q9BWU1 502 aa12.59□□□□□ -0.39
TOM1L1-211ENST00000572298 ANKARQ7Z5J8 1434 aa12.59□□□□□ -0.39
TOM1L1-211ENST00000572298 ROBO1Q9Y6N7 1651 aa12.58□□□□□ -0.4
TOM1L1-211ENST00000572298 ADGRB2O60241 1585 aa12.58□□□□□ -0.4
TOM1L1-211ENST00000572298 SRPK2P78362 688 aaKnown RBP12.58□□□□□ -0.4
TOM1L1-211ENST00000572298 ORAI2Q96SN7 254 aa12.58□□□□□ -0.4
TOM1L1-211ENST00000572298 NPHP3Q7Z494 1330 aa12.58□□□□□ -0.4
TOM1L1-211ENST00000572298 SBNO2Q9Y2G9 1366 aa12.57□□□□□ -0.4
TOM1L1-211ENST00000572298 PHF8Q9UPP1 1060 aa12.57□□□□□ -0.4
TOM1L1-211ENST00000572298 CCDC61Q9Y6R9 512 aa12.57□□□□□ -0.4
TOM1L1-211ENST00000572298 LRRC59Q96AG4 307 aaKnown RBP12.56□□□□□ -0.4
TOM1L1-211ENST00000572298 NUDT16Q96DE0 195 aaKnown RBP12.56□□□□□ -0.4
TOM1L1-211ENST00000572298 FMN2Q9NZ56 1722 aa12.55□□□□□ -0.4
TOM1L1-211ENST00000572298 ST20-MTHFSA0A0A6YYL1 179 aa12.55□□□□□ -0.4
TOM1L1-211ENST00000572298 PSME1Q06323 249 aa12.55□□□□□ -0.4
TOM1L1-211ENST00000572298 USP47Q96K76 1375 aa12.55□□□□□ -0.4
TOM1L1-211ENST00000572298 TULP4Q9NRJ4 1543 aa12.54□□□□□ -0.4
TOM1L1-211ENST00000572298 FOXO3O43524 673 aa12.54□□□□□ -0.4
TOM1L1-211ENST00000572298 EIF4G2P78344 907 aaKnown RBP eCLIP12.54□□□□□ -0.4
TOM1L1-211ENST00000572298 CDCA8Q53HL2 280 aa12.54□□□□□ -0.4
TOM1L1-211ENST00000572298 PUS7Q96PZ0 661 aaKnown RBP12.54□□□□□ -0.4
TOM1L1-211ENST00000572298 AHDC1Q5TGY3 1603 aaPredicted RBP12.53□□□□□ -0.4
TOM1L1-211ENST00000572298 NGDNQ8NEJ9 315 aaKnown RBP12.53□□□□□ -0.4
TOM1L1-211ENST00000572298 QRICH2Q9H0J4 1663 aa12.53□□□□□ -0.4
TOM1L1-211ENST00000572298 TMF1P82094 1093 aa12.52□□□□□ -0.41
TOM1L1-211ENST00000572298 CABP2Q9NPB3 220 aa12.52□□□□□ -0.41
TOM1L1-211ENST00000572298 RNF216Q9NWF9 866 aaPredicted RBP12.52□□□□□ -0.41
TOM1L1-211ENST00000572298 SOS2Q07890 1332 aaPredicted RBP12.52□□□□□ -0.41
TOM1L1-211ENST00000572298 ATAD2Q6PL18 1390 aa12.52□□□□□ -0.41
TOM1L1-211ENST00000572298 JCADQ9P266 1359 aa12.52□□□□□ -0.41
TOM1L1-211ENST00000572298 KIF1AQ12756 1690 aa12.51□□□□□ -0.41
TOM1L1-211ENST00000572298 PHLPP1O60346 1717 aa12.51□□□□□ -0.41
TOM1L1-211ENST00000572298 PLEKHG3A1L390 1219 aa12.51□□□□□ -0.41
TOM1L1-211ENST00000572298 KRT28Q7Z3Y7 464 aa12.51□□□□□ -0.41
TOM1L1-211ENST00000572298 PMFBP1Q8TBY8 1022 aa12.51□□□□□ -0.41
TOM1L1-211ENST00000572298 PRR36Q9H6K5 1346 aa12.51□□□□□ -0.41
TOM1L1-211ENST00000572298 TESK2Q96S53 571 aa12.5□□□□□ -0.41
TOM1L1-211ENST00000572298 SPATA31A6Q5VVP1 1343 aa12.49□□□□□ -0.41
TOM1L1-211ENST00000572298 ZEB1P37275 1124 aaPredicted RBP12.49□□□□□ -0.41
TOM1L1-211ENST00000572298 DDX17Q92841 729 aaKnown RBP12.49□□□□□ -0.41
TOM1L1-211ENST00000572298 ZNF692Q9BU19 519 aaPredicted RBP12.49□□□□□ -0.41
TOM1L1-211ENST00000572298 ITSN1Q15811 1721 aa12.48□□□□□ -0.41
TOM1L1-211ENST00000572298 NHSL1Q5SYE7 1610 aa12.48□□□□□ -0.41
TOM1L1-211ENST00000572298 ATP7BP35670 1465 aa12.48□□□□□ -0.41
TOM1L1-211ENST00000572298 CABP1Q9NZU7 370 aa12.48□□□□□ -0.41
TOM1L1-211ENST00000572298 PPIP5K1Q6PFW1 1433 aa12.47□□□□□ -0.41
TOM1L1-211ENST00000572298 SBNO1A3KN83 1393 aa12.47□□□□□ -0.41
TOM1L1-211ENST00000572298 BRD4O60885 1362 aaPredicted RBP12.47□□□□□ -0.41
TOM1L1-211ENST00000572298 ACEP12821 1306 aa12.47□□□□□ -0.41
TOM1L1-211ENST00000572298 RGPD8O14715 1765 aaPredicted RBP12.47□□□□□ -0.41
TOM1L1-211ENST00000572298 COL16A1Q07092 1604 aaPredicted RBP12.47□□□□□ -0.41
TOM1L1-211ENST00000572298 POLR3AO14802 1390 aaPredicted RBP12.46□□□□□ -0.41
TOM1L1-211ENST00000572298 NINLQ9Y2I6 1382 aa12.46□□□□□ -0.41
TOM1L1-211ENST00000572298 SPATA31A3Q5VYP0 1347 aa12.46□□□□□ -0.41
TOM1L1-211ENST00000572298 NPM3O75607 178 aaKnown RBP12.46□□□□□ -0.41
TOM1L1-211ENST00000572298 HSPA5P11021 654 aaKnown RBP12.46□□□□□ -0.41
TOM1L1-211ENST00000572298 XPCQ01831 940 aaPredicted RBP12.46□□□□□ -0.41
TOM1L1-211ENST00000572298 USP32Q8NFA0 1604 aa12.46□□□□□ -0.41
TOM1L1-211ENST00000572298 ARHGEF10O15013 1369 aa12.45□□□□□ -0.42
TOM1L1-211ENST00000572298 PAK3O75914 559 aaPredicted RBP12.45□□□□□ -0.42
TOM1L1-211ENST00000572298 HDGFL2Q7Z4V5 671 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms