RNA–Protein interactions for RNA: ENST00000571643.5

CDC27-213, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-213ENST00000571643 LIAT1Q6ZQX7 453 aa8.26□□□□□ -1.09
CDC27-213ENST00000571643 PARP9Q8IXQ6 854 aa8.26□□□□□ -1.09
CDC27-213ENST00000571643 GDF9O60383 454 aa8.25□□□□□ -1.09
CDC27-213ENST00000571643 REPIN1Q9BWE0 567 aaKnown RBP8.25□□□□□ -1.09
CDC27-213ENST00000571643 RNF19BQ6ZMZ0 732 aa8.24□□□□□ -1.09
CDC27-213ENST00000571643 USB1Q9BQ65 265 aaKnown RBP8.24□□□□□ -1.09
CDC27-213ENST00000571643 MYT1Q01538 1121 aa8.23□□□□□ -1.09
CDC27-213ENST00000571643 ZNF697Q5TEC3 545 aa8.23□□□□□ -1.09
CDC27-213ENST00000571643 ZNF787Q6DD87 383 aa8.23□□□□□ -1.09
CDC27-213ENST00000571643 SLC24A3Q9HC58 644 aa8.23□□□□□ -1.09
CDC27-213ENST00000571643 FDX1P10109 184 aa8.22□□□□□ -1.09
CDC27-213ENST00000571643 PDE4DQ08499 809 aa8.22□□□□□ -1.09
CDC27-213ENST00000571643 PKDCCQ504Y2 493 aa8.22□□□□□ -1.09
CDC27-213ENST00000571643 PLA2G2CQ5R387 149 aa8.22□□□□□ -1.09
CDC27-213ENST00000571643 FAM160A2Q8N612 972 aaPredicted RBP8.22□□□□□ -1.09
CDC27-213ENST00000571643 BEGAINQ9BUH8 593 aa8.22□□□□□ -1.09
CDC27-213ENST00000571643 PPEF1O14829 653 aaPredicted RBP8.21□□□□□ -1.1
CDC27-213ENST00000571643 GJA5P36382 358 aa8.21□□□□□ -1.1
CDC27-213ENST00000571643 RPIAP49247 311 aa8.21□□□□□ -1.1
CDC27-213ENST00000571643 MMP16P51512 607 aa8.21□□□□□ -1.1
CDC27-213ENST00000571643 RETREG3Q86VR2 466 aa8.21□□□□□ -1.1
CDC27-213ENST00000571643 SPIRE2Q8WWL2 714 aa8.21□□□□□ -1.1
CDC27-213ENST00000571643 FCF1Q9Y324 198 aaKnown RBP8.21□□□□□ -1.1
CDC27-213ENST00000571643 ZBTB24O43167 697 aaPredicted RBP8.19□□□□□ -1.1
CDC27-213ENST00000571643 CRIPAKQ8N1N5 446 aa8.19□□□□□ -1.1
CDC27-213ENST00000571643 PRDM9Q9NQV7 894 aa8.19□□□□□ -1.1
CDC27-213ENST00000571643 SPDYE5A6NIY4 337 aa8.18□□□□□ -1.1
CDC27-213ENST00000571643 DXOO77932 396 aaKnown RBP8.18□□□□□ -1.1
CDC27-213ENST00000571643 HLA-CQ95604 372 aa8.18□□□□□ -1.1
CDC27-213ENST00000571643 PKD2L1Q9P0L9 805 aa8.18□□□□□ -1.1
CDC27-213ENST00000571643 C6orf229H3BNL8 230 aa8.17□□□□□ -1.1
CDC27-213ENST00000571643 CD2BP2O95400 341 aaKnown RBP8.17□□□□□ -1.1
CDC27-213ENST00000571643 MS4A1P11836 297 aa8.17□□□□□ -1.1
CDC27-213ENST00000571643 JUNDP17535 347 aa8.17□□□□□ -1.1
CDC27-213ENST00000571643 GUCA2AQ02747 115 aa8.17□□□□□ -1.1
CDC27-213ENST00000571643 TBC1D2Q9BYX2 928 aa8.17□□□□□ -1.1
CDC27-213ENST00000571643 MOXD2PA6NHM9 499 aa8.16□□□□□ -1.1
CDC27-213ENST00000571643 ZNF775Q96BV0 537 aaPredicted RBP8.16□□□□□ -1.1
CDC27-213ENST00000571643 MTMR2Q13614 643 aa8.15□□□□□ -1.1
CDC27-213ENST00000571643 FAM187AA6NFU0 413 aa8.14□□□□□ -1.11
CDC27-213ENST00000571643 TNFRSF10AO00220 468 aa8.14□□□□□ -1.11
CDC27-213ENST00000571643 AVPP01185 164 aa8.14□□□□□ -1.11
CDC27-213ENST00000571643 RSBN1LQ6PCB5 846 aaPredicted RBP8.14□□□□□ -1.11
CDC27-213ENST00000571643 SPTLC1O15269 473 aa8.13□□□□□ -1.11
CDC27-213ENST00000571643 NDUFV2P19404 249 aa8.13□□□□□ -1.11
CDC27-213ENST00000571643 RSPH6AQ9H0K4 717 aa8.13□□□□□ -1.11
CDC27-213ENST00000571643 TOR4AQ9NXH8 423 aa8.13□□□□□ -1.11
CDC27-213ENST00000571643 PCDHGC3Q9UN70 934 aa8.13□□□□□ -1.11
CDC27-213ENST00000571643 PRPF38BQ5VTL8 546 aaKnown RBP8.12□□□□□ -1.11
CDC27-213ENST00000571643 DESI1Q6ICB0 168 aa8.12□□□□□ -1.11
CDC27-213ENST00000571643 ZBTB3Q9H5J0 574 aa8.12□□□□□ -1.11
CDC27-213ENST00000571643 AAASQ9NRG9 546 aa8.12□□□□□ -1.11
CDC27-213ENST00000571643 TUSC1Q2TAM9 212 aa8.11□□□□□ -1.11
CDC27-213ENST00000571643 CCDC24Q8N4L8 307 aa8.11□□□□□ -1.11
CDC27-213ENST00000571643 SYMPKQ92797 1274 aaKnown RBP8.11□□□□□ -1.11
CDC27-213ENST00000571643 NUDT12Q9BQG2 462 aa8.11□□□□□ -1.11
CDC27-213ENST00000571643 TRIM32Q13049 653 aa8.1□□□□□ -1.11
CDC27-213ENST00000571643 PTPRNQ16849 979 aa8.1□□□□□ -1.11
CDC27-213ENST00000571643 RIC3Q7Z5B4 369 aa8.1□□□□□ -1.11
CDC27-213ENST00000571643 DDRGK1Q96HY6 314 aa8.1□□□□□ -1.11
CDC27-213ENST00000571643 POTECB2RU33 542 aa8.09□□□□□ -1.11
CDC27-213ENST00000571643 CCNYL3P0C7X3 344 aa8.09□□□□□ -1.11
CDC27-213ENST00000571643 SMCPP49901 116 aaPredicted RBP8.09□□□□□ -1.11
CDC27-213ENST00000571643 CTC1Q2NKJ3 1217 aa8.09□□□□□ -1.11
CDC27-213ENST00000571643 LCE2AQ5TA79 106 aaPredicted RBP8.09□□□□□ -1.11
CDC27-213ENST00000571643 MYSM1Q5VVJ2 828 aa8.09□□□□□ -1.11
CDC27-213ENST00000571643 PRR7Q8TB68 274 aa8.09□□□□□ -1.11
CDC27-213ENST00000571643 ST8SIA5O15466 376 aa8.07□□□□□ -1.12
CDC27-213ENST00000571643 CLK2P49760 499 aaKnown RBP8.07□□□□□ -1.12
CDC27-213ENST00000571643 WNT7BP56706 349 aa8.07□□□□□ -1.12
CDC27-213ENST00000571643 WNT7AO00755 349 aa8.06□□□□□ -1.12
CDC27-213ENST00000571643 HRCP23327 699 aa8.06□□□□□ -1.12
CDC27-213ENST00000571643 FOXC1Q12948 553 aa8.06□□□□□ -1.12
CDC27-213ENST00000571643 KDM4CQ9H3R0 1056 aa8.06□□□□□ -1.12
CDC27-213ENST00000571643 CYP4X1Q8N118 509 aa8.05□□□□□ -1.12
CDC27-213ENST00000571643 NUTM2BA6NNL0 878 aaPredicted RBP8.04□□□□□ -1.12
CDC27-213ENST00000571643 NUTM2EB1AL46 878 aaPredicted RBP8.04□□□□□ -1.12
CDC27-213ENST00000571643 NUTM2DQ5VT03 806 aaPredicted RBP8.04□□□□□ -1.12
CDC27-213ENST00000571643 NUTM2AQ8IVF1 878 aaPredicted RBP8.04□□□□□ -1.12
CDC27-213ENST00000571643 HELBQ8NG08 1087 aaPredicted RBP8.04□□□□□ -1.12
CDC27-213ENST00000571643 CSPP1Q1MSJ5 1256 aa8.03□□□□□ -1.12
CDC27-213ENST00000571643 SH3D19Q5HYK7 790 aa8.03□□□□□ -1.12
CDC27-213ENST00000571643 TREML4Q6UXN2 200 aa8.03□□□□□ -1.12
CDC27-213ENST00000571643 EVA1BQ9NVM1 165 aa8.03□□□□□ -1.12
CDC27-213ENST00000571643 LIMD1Q9UGP4 676 aa8.03□□□□□ -1.12
CDC27-213ENST00000571643 PCDHB15Q9Y5E8 787 aa8.03□□□□□ -1.12
CDC27-213ENST00000571643 KCNH2Q12809 1159 aa8.02□□□□□ -1.13
CDC27-213ENST00000571643 LYPD8Q6UX82 237 aa8.02□□□□□ -1.13
CDC27-213ENST00000571643 GPBP1L1Q9HC44 474 aaPredicted RBP8.02□□□□□ -1.13
CDC27-213ENST00000571643 TTC24A2A3L6 582 aaPredicted RBP8.01□□□□□ -1.13
CDC27-213ENST00000571643 CFAP99D6REC4 459 aa8.01□□□□□ -1.13
CDC27-213ENST00000571643 LILRB3O75022 631 aa8.01□□□□□ -1.13
CDC27-213ENST00000571643 SKIV2LQ15477 1246 aaKnown RBP8.01□□□□□ -1.13
CDC27-213ENST00000571643 UNC93B1Q9H1C4 597 aa8.01□□□□□ -1.13
CDC27-213ENST00000571643 AXIN1O15169 862 aa8□□□□□ -1.13
CDC27-213ENST00000571643 SNIP1Q8TAD8 396 aaKnown RBP8□□□□□ -1.13
CDC27-213ENST00000571643 CABLES1Q8TDN4 633 aa8□□□□□ -1.13
CDC27-213ENST00000571643 QPCTQ16769 361 aa7.99□□□□□ -1.13
CDC27-213ENST00000571643 RC3H1Q5TC82 1133 aaKnown RBP7.99□□□□□ -1.13
CDC27-213ENST00000571643 TSC1Q92574 1164 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms