RNA–Protein interactions for RNA: ENST00000571457.1

CHMP6-202, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-202ENST00000571457 PRAG1Q86YV5 1406 aa17.3■□□□□ 0.36
CHMP6-202ENST00000571457 MYOM2P54296 1465 aa17.29■□□□□ 0.36
CHMP6-202ENST00000571457 GJD4Q96KN9 370 aaPredicted RBP17.28■□□□□ 0.36
CHMP6-202ENST00000571457 BCL9LQ86UU0 1499 aa17.28■□□□□ 0.36
CHMP6-202ENST00000571457 CLTCL1P53675 1640 aa17.28■□□□□ 0.36
CHMP6-202ENST00000571457 KIF1BO60333 1816 aa17.28■□□□□ 0.36
CHMP6-202ENST00000571457 ESCO1Q5FWF5 840 aa17.27■□□□□ 0.36
CHMP6-202ENST00000571457 LRPPRCP42704 1394 aaKnown RBP17.26■□□□□ 0.35
CHMP6-202ENST00000571457 RPGRIP1LQ68CZ1 1315 aa17.25■□□□□ 0.35
CHMP6-202ENST00000571457 BLMP54132 1417 aaPredicted RBP17.23■□□□□ 0.35
CHMP6-202ENST00000571457 MARF1Q9Y4F3 1742 aaKnown RBP17.23■□□□□ 0.35
CHMP6-202ENST00000571457 PXDNQ92626 1479 aa17.23■□□□□ 0.35
CHMP6-202ENST00000571457 CDC42BPGQ6DT37 1551 aa17.23■□□□□ 0.35
CHMP6-202ENST00000571457 FOXO3O43524 673 aa17.22■□□□□ 0.35
CHMP6-202ENST00000571457 UNC5CLQ8IV45 518 aa17.22■□□□□ 0.35
CHMP6-202ENST00000571457 SF3B2Q13435 895 aaKnown RBP17.21■□□□□ 0.35
CHMP6-202ENST00000571457 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.2■□□□□ 0.34
CHMP6-202ENST00000571457 XPCQ01831 940 aaPredicted RBP17.19■□□□□ 0.34
CHMP6-202ENST00000571457 RALGAPBQ86X10 1494 aa17.18■□□□□ 0.34
CHMP6-202ENST00000571457 SLIT2O94813 1529 aa17.16■□□□□ 0.34
CHMP6-202ENST00000571457 NAIPQ13075 1403 aa17.16■□□□□ 0.34
CHMP6-202ENST00000571457 GLI3P10071 1580 aa17.15■□□□□ 0.34
CHMP6-202ENST00000571457 DEFB132Q7Z7B7 95 aa17.15■□□□□ 0.34
CHMP6-202ENST00000571457 SPATA31A3Q5VYP0 1347 aa17.15■□□□□ 0.34
CHMP6-202ENST00000571457 SEPT12Q8IYM1 358 aa17.14■□□□□ 0.33
CHMP6-202ENST00000571457 CCDC144AA2RUR9 1427 aa17.13■□□□□ 0.33
CHMP6-202ENST00000571457 PPLO60437 1756 aa17.13■□□□□ 0.33
CHMP6-202ENST00000571457 NUTM2FA1L443 756 aa17.13■□□□□ 0.33
CHMP6-202ENST00000571457 HAP1P54257 671 aaPredicted RBP17.13■□□□□ 0.33
CHMP6-202ENST00000571457 LRP5O75197 1615 aa17.12■□□□□ 0.33
CHMP6-202ENST00000571457 VPS72Q15906 364 aa17.12■□□□□ 0.33
CHMP6-202ENST00000571457 TECPR2O15040 1411 aa17.12■□□□□ 0.33
CHMP6-202ENST00000571457 WAPLQ7Z5K2 1190 aa17.11■□□□□ 0.33
CHMP6-202ENST00000571457 SLC4A1APQ9BWU0 796 aaKnown RBP17.11■□□□□ 0.33
CHMP6-202ENST00000571457 STK26Q9P289 416 aa17.11■□□□□ 0.33
CHMP6-202ENST00000571457 USP32Q8NFA0 1604 aa17.1■□□□□ 0.33
CHMP6-202ENST00000571457 KIF1AQ12756 1690 aa17.1■□□□□ 0.33
CHMP6-202ENST00000571457 BRWD3Q6RI45 1802 aa17.1■□□□□ 0.33
CHMP6-202ENST00000571457 ONECUT3O60422 494 aaPredicted RBP17.1■□□□□ 0.33
CHMP6-202ENST00000571457 KRT28Q7Z3Y7 464 aa17.1■□□□□ 0.33
CHMP6-202ENST00000571457 KRT27Q7Z3Y8 459 aa17.1■□□□□ 0.33
CHMP6-202ENST00000571457 CCDC9Q9Y3X0 531 aaKnown RBP17.1■□□□□ 0.33
CHMP6-202ENST00000571457 PSME1Q06323 249 aa17.09■□□□□ 0.33
CHMP6-202ENST00000571457 ABCC11Q96J66 1382 aa17.09■□□□□ 0.33
CHMP6-202ENST00000571457 BAG6P46379 1132 aa17.08■□□□□ 0.32
CHMP6-202ENST00000571457 RRBP1Q9P2E9 1410 aaKnown RBP17.07■□□□□ 0.32
CHMP6-202ENST00000571457 ADGRF5Q8IZF2 1346 aa17.07■□□□□ 0.32
CHMP6-202ENST00000571457 TNS3Q68CZ2 1445 aa17.06■□□□□ 0.32
CHMP6-202ENST00000571457 ANKRD30BQ9BXX2 1392 aa17.06■□□□□ 0.32
CHMP6-202ENST00000571457 FMN2Q9NZ56 1722 aa17.06■□□□□ 0.32
CHMP6-202ENST00000571457 NWD2Q9ULI1 1742 aa17.06■□□□□ 0.32
CHMP6-202ENST00000571457 PHF8Q9UPP1 1060 aa17.05■□□□□ 0.32
CHMP6-202ENST00000571457 ARHGEF10O15013 1369 aa17.04■□□□□ 0.32
CHMP6-202ENST00000571457 A0A0G2JS52 829 aa17.04■□□□□ 0.32
CHMP6-202ENST00000571457 HRCP23327 699 aa17.04■□□□□ 0.32
CHMP6-202ENST00000571457 MYT1Q01538 1121 aa17.04■□□□□ 0.32
CHMP6-202ENST00000571457 PPARGC1BQ86YN6 1023 aaKnown RBP17.04■□□□□ 0.32
CHMP6-202ENST00000571457 SIRT1Q96EB6 747 aa17.04■□□□□ 0.32
CHMP6-202ENST00000571457 KNDC1Q76NI1 1749 aa17.04■□□□□ 0.32
CHMP6-202ENST00000571457 SBNO1A3KN83 1393 aa17.03■□□□□ 0.32
CHMP6-202ENST00000571457 PLEKHH1Q9ULM0 1364 aa17.03■□□□□ 0.32
CHMP6-202ENST00000571457 PSDA5PKW4 1024 aaPredicted RBP17.03■□□□□ 0.32
CHMP6-202ENST00000571457 TMEM132EQ6IEE7 984 aa17.03■□□□□ 0.32
CHMP6-202ENST00000571457 LMOD2Q6P5Q4 547 aa17.03■□□□□ 0.32
CHMP6-202ENST00000571457 CABLES1Q8TDN4 633 aa17.03■□□□□ 0.32
CHMP6-202ENST00000571457 PLCH1Q4KWH8 1693 aa17.03■□□□□ 0.32
CHMP6-202ENST00000571457 RGL3Q3MIN7 710 aa17.02■□□□□ 0.32
CHMP6-202ENST00000571457 YTHDC2Q9H6S0 1430 aaKnown RBP17.02■□□□□ 0.31
CHMP6-202ENST00000571457 PLEKHG5O94827 1062 aa17■□□□□ 0.31
CHMP6-202ENST00000571457 PIK3C2GO75747 1445 aa16.99■□□□□ 0.31
CHMP6-202ENST00000571457 FAM83GA6ND36 823 aa16.99■□□□□ 0.31
CHMP6-202ENST00000571457 FAM98CQ17RN3 349 aaKnown RBP16.99■□□□□ 0.31
CHMP6-202ENST00000571457 NRXN1Q9ULB1 1477 aa16.99■□□□□ 0.31
CHMP6-202ENST00000571457 SPATA31E1Q6ZUB1 1445 aa16.98■□□□□ 0.31
CHMP6-202ENST00000571457 IFT172Q9UG01 1749 aa16.97■□□□□ 0.31
CHMP6-202ENST00000571457 ABCA3Q99758 1704 aa16.96■□□□□ 0.31
CHMP6-202ENST00000571457 EN1Q05925 392 aaPredicted RBP16.96■□□□□ 0.31
CHMP6-202ENST00000571457 BTG4Q9NY30 223 aa16.96■□□□□ 0.31
CHMP6-202ENST00000571457 RGPD8O14715 1765 aaPredicted RBP16.96■□□□□ 0.31
CHMP6-202ENST00000571457 DHX57Q6P158 1386 aaKnown RBP16.95■□□□□ 0.3
CHMP6-202ENST00000571457 RGPD1P0DJD0 1748 aa16.95■□□□□ 0.3
CHMP6-202ENST00000571457 R3HDM1Q15032 1099 aaKnown RBP16.94■□□□□ 0.3
CHMP6-202ENST00000571457 C14orf93Q9H972 538 aaKnown RBP16.94■□□□□ 0.3
CHMP6-202ENST00000571457 DISP2A7MBM2 1401 aa16.93■□□□□ 0.3
CHMP6-202ENST00000571457 ANKARQ7Z5J8 1434 aa16.93■□□□□ 0.3
CHMP6-202ENST00000571457 PMFBP1Q8TBY8 1022 aa16.92■□□□□ 0.3
CHMP6-202ENST00000571457 NRAPQ86VF7 1730 aa16.92■□□□□ 0.3
CHMP6-202ENST00000571457 COL14A1Q05707 1796 aaKnown RBP16.92■□□□□ 0.3
CHMP6-202ENST00000571457 GPRASP1Q5JY77 1395 aa16.91■□□□□ 0.3
CHMP6-202ENST00000571457 SAFB2Q14151 953 aaKnown RBP eCLIP16.91■□□□□ 0.3
CHMP6-202ENST00000571457 PRAM1Q96QH2 718 aa16.91■□□□□ 0.3
CHMP6-202ENST00000571457 SPATA31A5Q5VU36 1347 aa16.91■□□□□ 0.3
CHMP6-202ENST00000571457 SPATA31A7Q8IWB4 1347 aa16.91■□□□□ 0.3
CHMP6-202ENST00000571457 POGKQ9P215 609 aa16.9■□□□□ 0.3
CHMP6-202ENST00000571457 FAM182BQ5T319 152 aa16.89■□□□□ 0.29
CHMP6-202ENST00000571457 MPHOSPH9Q99550 1183 aa16.89■□□□□ 0.29
CHMP6-202ENST00000571457 EIF3AQ14152 1382 aaKnown RBP16.89■□□□□ 0.29
CHMP6-202ENST00000571457 CFAP70Q5T0N1 1121 aa16.88■□□□□ 0.29
CHMP6-202ENST00000571457 PARD3Q8TEW0 1356 aa16.88■□□□□ 0.29
CHMP6-202ENST00000571457 ADGRB2O60241 1585 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms