RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 CHD2O14647 1828 aaKnown RBP21.48■■□□□ 1.03
HERPUD1-219ENST00000570273 SLC24A1O60721 1099 aa21.48■■□□□ 1.03
HERPUD1-219ENST00000570273 KCNA6P17658 529 aa21.48■■□□□ 1.03
HERPUD1-219ENST00000570273 POLR3GLQ9BT43 218 aa21.47■■□□□ 1.03
HERPUD1-219ENST00000570273 MINK1Q8N4C8 1332 aaPredicted RBP21.46■■□□□ 1.03
HERPUD1-219ENST00000570273 STRCP1A6NGW2 1772 aa21.45■■□□□ 1.02
HERPUD1-219ENST00000570273 TULP4Q9NRJ4 1543 aa21.44■■□□□ 1.02
HERPUD1-219ENST00000570273 NKTRP30414 1462 aaKnown RBP21.43■■□□□ 1.02
HERPUD1-219ENST00000570273 ZNF335Q9H4Z2 1342 aaPredicted RBP21.43■■□□□ 1.02
HERPUD1-219ENST00000570273 CDCA8Q53HL2 280 aa21.43■■□□□ 1.02
HERPUD1-219ENST00000570273 EVC2Q86UK5 1308 aa21.42■■□□□ 1.02
HERPUD1-219ENST00000570273 ADGRB2O60241 1585 aa21.39■■□□□ 1.01
HERPUD1-219ENST00000570273 DDX10Q13206 875 aaKnown RBP21.38■■□□□ 1.01
HERPUD1-219ENST00000570273 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.38■■□□□ 1.01
HERPUD1-219ENST00000570273 SRPK2P78362 688 aaKnown RBP21.36■■□□□ 1.01
HERPUD1-219ENST00000570273 PROSER2Q86WR7 435 aaPredicted RBP21.36■■□□□ 1.01
HERPUD1-219ENST00000570273 IQSEC2Q5JU85 1478 aa21.35■■□□□ 1.01
HERPUD1-219ENST00000570273 WASLO00401 505 aaPredicted RBP21.34■■□□□ 1.01
HERPUD1-219ENST00000570273 CDK19Q9BWU1 502 aa21.34■■□□□ 1.01
HERPUD1-219ENST00000570273 CABP2Q9NPB3 220 aa21.34■■□□□ 1.01
HERPUD1-219ENST00000570273 ADGRL3Q9HAR2 1447 aa21.33■■□□□ 1.01
HERPUD1-219ENST00000570273 CERKQ8TCT0 537 aa21.33■■□□□ 1.01
HERPUD1-219ENST00000570273 DIEXFQ68CQ4 756 aaKnown RBP21.32■■□□□ 1
HERPUD1-219ENST00000570273 C14orf37Q86TY3 774 aa21.32■■□□□ 1
HERPUD1-219ENST00000570273 RBM33Q96EV2 1170 aaKnown RBP21.32■■□□□ 1
HERPUD1-219ENST00000570273 PUS7Q96PZ0 661 aaKnown RBP21.32■■□□□ 1
HERPUD1-219ENST00000570273 NALCNQ8IZF0 1738 aa21.32■■□□□ 1
HERPUD1-219ENST00000570273 ATAD2Q6PL18 1390 aa21.31■■□□□ 1
HERPUD1-219ENST00000570273 MYOM1P52179 1685 aa21.3■■□□□ 1
HERPUD1-219ENST00000570273 XIRP1Q702N8 1843 aaKnown RBP21.3■■□□□ 1
HERPUD1-219ENST00000570273 CDC42BPGQ6DT37 1551 aa21.3■■□□□ 1
HERPUD1-219ENST00000570273 TMEM94Q12767 1356 aa21.3■■□□□ 1
HERPUD1-219ENST00000570273 LRRC7Q96NW7 1537 aa21.29■■□□□ 1
HERPUD1-219ENST00000570273 TMC1Q8TDI8 760 aa21.27■■□□□ 1
HERPUD1-219ENST00000570273 NCOA3Q9Y6Q9 1424 aa21.26■□□□□ 0.99
HERPUD1-219ENST00000570273 ATP7BP35670 1465 aa21.26■□□□□ 0.99
HERPUD1-219ENST00000570273 NINLQ9Y2I6 1382 aa21.26■□□□□ 0.99
HERPUD1-219ENST00000570273 FMN2Q9NZ56 1722 aa21.24■□□□□ 0.99
HERPUD1-219ENST00000570273 NUDT16Q96DE0 195 aaKnown RBP21.24■□□□□ 0.99
HERPUD1-219ENST00000570273 NUTM2FA1L443 756 aa21.23■□□□□ 0.99
HERPUD1-219ENST00000570273 PRR36Q9H6K5 1346 aa21.23■□□□□ 0.99
HERPUD1-219ENST00000570273 PANK3Q9H999 370 aa21.22■□□□□ 0.99
HERPUD1-219ENST00000570273 ANKARQ7Z5J8 1434 aa21.22■□□□□ 0.99
HERPUD1-219ENST00000570273 PPIP5K1Q6PFW1 1433 aa21.21■□□□□ 0.99
HERPUD1-219ENST00000570273 SLC12A5Q9H2X9 1139 aa21.21■□□□□ 0.99
HERPUD1-219ENST00000570273 MSH6P52701 1360 aa21.21■□□□□ 0.99
HERPUD1-219ENST00000570273 C19orf44Q9H6X5 657 aa21.21■□□□□ 0.99
HERPUD1-219ENST00000570273 USP32Q8NFA0 1604 aa21.2■□□□□ 0.98
HERPUD1-219ENST00000570273 DCCP43146 1447 aa21.2■□□□□ 0.98
HERPUD1-219ENST00000570273 TOPAZ1Q8N9V7 1692 aa21.19■□□□□ 0.98
HERPUD1-219ENST00000570273 CABP1Q9NZU7 370 aa21.19■□□□□ 0.98
HERPUD1-219ENST00000570273 CCDC61Q9Y6R9 512 aa21.19■□□□□ 0.98
HERPUD1-219ENST00000570273 ANKRD36BQ8N2N9 1353 aa21.18■□□□□ 0.98
HERPUD1-219ENST00000570273 ATF3P18847 181 aa21.17■□□□□ 0.98
HERPUD1-219ENST00000570273 ITSN1Q15811 1721 aa21.17■□□□□ 0.98
HERPUD1-219ENST00000570273 FBXO41Q8TF61 875 aa21.16■□□□□ 0.98
HERPUD1-219ENST00000570273 TERF2IPQ9NYB0 399 aa21.16■□□□□ 0.98
HERPUD1-219ENST00000570273 A0A1W2PP64 1363 aa21.16■□□□□ 0.98
HERPUD1-219ENST00000570273 HDGFL2Q7Z4V5 671 aaPredicted RBP21.15■□□□□ 0.98
HERPUD1-219ENST00000570273 CD163L1Q9NR16 1453 aa21.15■□□□□ 0.98
HERPUD1-219ENST00000570273 NSD3Q9BZ95 1437 aa21.14■□□□□ 0.98
HERPUD1-219ENST00000570273 CADPS2Q86UW7 1296 aa21.13■□□□□ 0.97
HERPUD1-219ENST00000570273 KNSTRNQ9Y448 316 aa21.13■□□□□ 0.97
HERPUD1-219ENST00000570273 MST1RQ04912 1400 aa21.12■□□□□ 0.97
HERPUD1-219ENST00000570273 PLEKHG3A1L390 1219 aa21.12■□□□□ 0.97
HERPUD1-219ENST00000570273 PER1O15534 1290 aaPredicted RBP21.11■□□□□ 0.97
HERPUD1-219ENST00000570273 ANP32CO43423 234 aa21.11■□□□□ 0.97
HERPUD1-219ENST00000570273 CARD14Q9BXL6 1004 aa21.11■□□□□ 0.97
HERPUD1-219ENST00000570273 C1orf167Q5SNV9 1468 aa21.11■□□□□ 0.97
HERPUD1-219ENST00000570273 CPSF1Q10570 1443 aaKnown RBP21.1■□□□□ 0.97
HERPUD1-219ENST00000570273 PMFBP1Q8TBY8 1022 aa21.1■□□□□ 0.97
HERPUD1-219ENST00000570273 RGPD8O14715 1765 aaPredicted RBP21.09■□□□□ 0.97
HERPUD1-219ENST00000570273 KTN1Q86UP2 1357 aaKnown RBP21.09■□□□□ 0.97
HERPUD1-219ENST00000570273 ACEP12821 1306 aa21.09■□□□□ 0.97
HERPUD1-219ENST00000570273 CNGB1Q14028 1251 aaPredicted RBP21.08■□□□□ 0.97
HERPUD1-219ENST00000570273 ESCO1Q5FWF5 840 aa21.08■□□□□ 0.97
HERPUD1-219ENST00000570273 NGDNQ8NEJ9 315 aaKnown RBP21.08■□□□□ 0.97
HERPUD1-219ENST00000570273 PHF8Q9UPP1 1060 aa21.08■□□□□ 0.97
HERPUD1-219ENST00000570273 POLR3AO14802 1390 aaPredicted RBP21.07■□□□□ 0.96
HERPUD1-219ENST00000570273 AKAP12Q02952 1782 aa21.07■□□□□ 0.96
HERPUD1-219ENST00000570273 ILDR1Q86SU0 546 aaPredicted RBP21.06■□□□□ 0.96
HERPUD1-219ENST00000570273 MON2Q7Z3U7 1717 aa21.06■□□□□ 0.96
HERPUD1-219ENST00000570273 EDC4Q6P2E9 1401 aaKnown RBP21.05■□□□□ 0.96
HERPUD1-219ENST00000570273 ZNF692Q9BU19 519 aaPredicted RBP21.05■□□□□ 0.96
HERPUD1-219ENST00000570273 KIF1AQ12756 1690 aa21.05■□□□□ 0.96
HERPUD1-219ENST00000570273 AMER1Q5JTC6 1135 aaPredicted RBP21.04■□□□□ 0.96
HERPUD1-219ENST00000570273 ORAI2Q96SN7 254 aa21.04■□□□□ 0.96
HERPUD1-219ENST00000570273 CGNL1Q0VF96 1302 aa21.04■□□□□ 0.96
HERPUD1-219ENST00000570273 USP6P35125 1406 aa21.04■□□□□ 0.96
HERPUD1-219ENST00000570273 CC2D1BQ5T0F9 858 aaKnown RBP21.04■□□□□ 0.96
HERPUD1-219ENST00000570273 MIER1Q8N108 512 aa21.04■□□□□ 0.96
HERPUD1-219ENST00000570273 NPC1L1Q9UHC9 1359 aa21.03■□□□□ 0.96
HERPUD1-219ENST00000570273 UBAP1LF5GYI3 381 aa21.03■□□□□ 0.96
HERPUD1-219ENST00000570273 NRKQ7Z2Y5 1582 aa21.02■□□□□ 0.96
HERPUD1-219ENST00000570273 TOM1O60784 492 aa21.02■□□□□ 0.96
HERPUD1-219ENST00000570273 PRKRIP1Q9H875 184 aaPredicted RBP21.02■□□□□ 0.96
HERPUD1-219ENST00000570273 NSD2O96028 1365 aa21.01■□□□□ 0.95
HERPUD1-219ENST00000570273 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21■□□□□ 0.95
HERPUD1-219ENST00000570273 SLAIN2Q9P270 581 aa20.99■□□□□ 0.95
HERPUD1-219ENST00000570273 PARD3Q8TEW0 1356 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 174.8 ms