RNA–Protein interactions for RNA: ENST00000569561.5

EDC3-216, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 5

Gene EDC3, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-216ENST00000569561 NHSL1Q5SYE7 1610 aa24.28■■□□□ 1.48
EDC3-216ENST00000569561 JCADQ9P266 1359 aa24.28■■□□□ 1.48
EDC3-216ENST00000569561 KDM2AQ9Y2K7 1162 aa24.27■■□□□ 1.48
EDC3-216ENST00000569561 TRIM26Q12899 539 aaPredicted RBP24.25■■□□□ 1.47
EDC3-216ENST00000569561 ORAI2Q96SN7 254 aa24.21■■□□□ 1.47
EDC3-216ENST00000569561 DDX17Q92841 729 aaKnown RBP24.2■■□□□ 1.46
EDC3-216ENST00000569561 SHPRHQ149N8 1683 aa24.19■■□□□ 1.46
EDC3-216ENST00000569561 PRAM1Q96QH2 718 aa24.19■■□□□ 1.46
EDC3-216ENST00000569561 LRP6O75581 1613 aa24.17■■□□□ 1.46
EDC3-216ENST00000569561 SIN3AQ96ST3 1273 aa24.17■■□□□ 1.46
EDC3-216ENST00000569561 RGS17Q9UGC6 210 aaPredicted RBP24.17■■□□□ 1.46
EDC3-216ENST00000569561 FMN2Q9NZ56 1722 aa24.17■■□□□ 1.46
EDC3-216ENST00000569561 ADGRB2O60241 1585 aa24.16■■□□□ 1.46
EDC3-216ENST00000569561 SOS2Q07890 1332 aaPredicted RBP24.16■■□□□ 1.46
EDC3-216ENST00000569561 SPATA31A6Q5VVP1 1343 aa24.16■■□□□ 1.46
EDC3-216ENST00000569561 KIAA1210Q9ULL0 1709 aa24.15■■□□□ 1.46
EDC3-216ENST00000569561 TRAK1Q9UPV9 953 aa24.14■■□□□ 1.45
EDC3-216ENST00000569561 L3MBTL2Q969R5 705 aa24.13■■□□□ 1.45
EDC3-216ENST00000569561 PNPLA6Q8IY17 1366 aa24.12■■□□□ 1.45
EDC3-216ENST00000569561 LRRC59Q96AG4 307 aaKnown RBP24.11■■□□□ 1.45
EDC3-216ENST00000569561 PHF23Q9BUL5 403 aaPredicted RBP24.11■■□□□ 1.45
EDC3-216ENST00000569561 PXDNQ92626 1479 aa24.11■■□□□ 1.45
EDC3-216ENST00000569561 ARHGEF28Q8N1W1 1705 aaKnown RBP24.1■■□□□ 1.45
EDC3-216ENST00000569561 SAFB2Q14151 953 aaKnown RBP eCLIP24.1■■□□□ 1.45
EDC3-216ENST00000569561 ESCO1Q5FWF5 840 aa24.1■■□□□ 1.45
EDC3-216ENST00000569561 NUTM2FA1L443 756 aa24.09■■□□□ 1.45
EDC3-216ENST00000569561 POGKQ9P215 609 aa24.09■■□□□ 1.45
EDC3-216ENST00000569561 NBPF1Q3BBV0 1214 aa24.08■■□□□ 1.45
EDC3-216ENST00000569561 ANKARQ7Z5J8 1434 aa24.07■■□□□ 1.44
EDC3-216ENST00000569561 NPHP3Q7Z494 1330 aa24.07■■□□□ 1.44
EDC3-216ENST00000569561 USP32Q8NFA0 1604 aa24.06■■□□□ 1.44
EDC3-216ENST00000569561 KIF1AQ12756 1690 aa24.05■■□□□ 1.44
EDC3-216ENST00000569561 FOXO3O43524 673 aa24.04■■□□□ 1.44
EDC3-216ENST00000569561 NEUROD1Q13562 356 aa24.04■■□□□ 1.44
EDC3-216ENST00000569561 MINK1Q8N4C8 1332 aaPredicted RBP24.03■■□□□ 1.44
EDC3-216ENST00000569561 TULP4Q9NRJ4 1543 aa24.02■■□□□ 1.44
EDC3-216ENST00000569561 HIRIP3Q9BW71 556 aaPredicted RBP24.02■■□□□ 1.44
EDC3-216ENST00000569561 PRR36Q9H6K5 1346 aa24.02■■□□□ 1.44
EDC3-216ENST00000569561 COL22A1Q8NFW1 1626 aaPredicted RBP24.01■■□□□ 1.43
EDC3-216ENST00000569561 WASLO00401 505 aaPredicted RBP24■■□□□ 1.43
EDC3-216ENST00000569561 SOCS7O14512 581 aa24■■□□□ 1.43
EDC3-216ENST00000569561 POTEAQ6S8J7 498 aa24■■□□□ 1.43
EDC3-216ENST00000569561 TRPM1Q7Z4N2 1603 aa23.99■■□□□ 1.43
EDC3-216ENST00000569561 PHF8Q9UPP1 1060 aa23.99■■□□□ 1.43
EDC3-216ENST00000569561 RGPD8O14715 1765 aaPredicted RBP23.98■■□□□ 1.43
EDC3-216ENST00000569561 XPCQ01831 940 aaPredicted RBP23.98■■□□□ 1.43
EDC3-216ENST00000569561 EIF3AQ14152 1382 aaKnown RBP23.98■■□□□ 1.43
EDC3-216ENST00000569561 ATP7BP35670 1465 aa23.96■■□□□ 1.43
EDC3-216ENST00000569561 NUTM2BA6NNL0 878 aaPredicted RBP23.96■■□□□ 1.43
EDC3-216ENST00000569561 NUTM2EB1AL46 878 aaPredicted RBP23.96■■□□□ 1.43
EDC3-216ENST00000569561 NUTM2AQ8IVF1 878 aaPredicted RBP23.96■■□□□ 1.43
EDC3-216ENST00000569561 NBPF8Q3BBV2 869 aa23.95■■□□□ 1.42
EDC3-216ENST00000569561 GPRASP1Q5JY77 1395 aa23.94■■□□□ 1.42
EDC3-216ENST00000569561 SPATA31A3Q5VYP0 1347 aa23.94■■□□□ 1.42
EDC3-216ENST00000569561 MEX3CQ5U5Q3 659 aaKnown RBP23.93■■□□□ 1.42
EDC3-216ENST00000569561 KRT28Q7Z3Y7 464 aa23.92■■□□□ 1.42
EDC3-216ENST00000569561 SBNO1A3KN83 1393 aa23.91■■□□□ 1.42
EDC3-216ENST00000569561 TNS3Q68CZ2 1445 aa23.91■■□□□ 1.42
EDC3-216ENST00000569561 CENPJQ9HC77 1338 aaPredicted RBP23.9■■□□□ 1.42
EDC3-216ENST00000569561 PMFBP1Q8TBY8 1022 aa23.9■■□□□ 1.42
EDC3-216ENST00000569561 ROCK2O75116 1388 aaKnown RBP23.89■■□□□ 1.41
EDC3-216ENST00000569561 ZNF772Q68DY9 489 aaPredicted RBP23.88■■□□□ 1.41
EDC3-216ENST00000569561 CDK19Q9BWU1 502 aa23.88■■□□□ 1.41
EDC3-216ENST00000569561 TONSLQ96HA7 1378 aa23.88■■□□□ 1.41
EDC3-216ENST00000569561 TOPAZ1Q8N9V7 1692 aa23.87■■□□□ 1.41
EDC3-216ENST00000569561 NUDT16Q96DE0 195 aaKnown RBP23.87■■□□□ 1.41
EDC3-216ENST00000569561 TRPM3Q9HCF6 1732 aaPredicted RBP23.87■■□□□ 1.41
EDC3-216ENST00000569561 RALGAPBQ86X10 1494 aa23.87■■□□□ 1.41
EDC3-216ENST00000569561 AFF2P51816 1311 aa23.86■■□□□ 1.41
EDC3-216ENST00000569561 PSME1Q06323 249 aa23.85■■□□□ 1.41
EDC3-216ENST00000569561 C8orf37Q96NL8 207 aa23.85■■□□□ 1.41
EDC3-216ENST00000569561 QRICH2Q9H0J4 1663 aa23.85■■□□□ 1.41
EDC3-216ENST00000569561 ADAMTS2O95450 1211 aa23.84■■□□□ 1.41
EDC3-216ENST00000569561 ITSN1Q15811 1721 aa23.83■■□□□ 1.41
EDC3-216ENST00000569561 POLR3AO14802 1390 aaPredicted RBP23.82■■□□□ 1.4
EDC3-216ENST00000569561 ARHGEF10O15013 1369 aa23.81■■□□□ 1.4
EDC3-216ENST00000569561 ALS2Q96Q42 1657 aa23.81■■□□□ 1.4
EDC3-216ENST00000569561 FNBP4Q8N3X1 1017 aaPredicted RBP23.81■■□□□ 1.4
EDC3-216ENST00000569561 PLEKHG3A1L390 1219 aa23.8■■□□□ 1.4
EDC3-216ENST00000569561 CCDC61Q9Y6R9 512 aa23.8■■□□□ 1.4
EDC3-216ENST00000569561 PCGF6Q9BYE7 350 aa23.78■■□□□ 1.4
EDC3-216ENST00000569561 ABCA3Q99758 1704 aa23.77■■□□□ 1.4
EDC3-216ENST00000569561 MARF1Q9Y4F3 1742 aaKnown RBP23.77■■□□□ 1.4
EDC3-216ENST00000569561 NGDNQ8NEJ9 315 aaKnown RBP23.77■■□□□ 1.4
EDC3-216ENST00000569561 NGLY1Q96IV0 654 aa23.77■■□□□ 1.4
EDC3-216ENST00000569561 SBNO2Q9Y2G9 1366 aa23.77■■□□□ 1.4
EDC3-216ENST00000569561 CABP2Q9NPB3 220 aa23.76■■□□□ 1.39
EDC3-216ENST00000569561 CLSPNQ9HAW4 1339 aa23.76■■□□□ 1.39
EDC3-216ENST00000569561 BCL9LQ86UU0 1499 aa23.75■■□□□ 1.39
EDC3-216ENST00000569561 CDK12Q9NYV4 1490 aaPredicted RBP23.75■■□□□ 1.39
EDC3-216ENST00000569561 SLIT2O94813 1529 aa23.74■■□□□ 1.39
EDC3-216ENST00000569561 CABLES1Q8TDN4 633 aa23.74■■□□□ 1.39
EDC3-216ENST00000569561 CARD11Q9BXL7 1154 aa23.74■■□□□ 1.39
EDC3-216ENST00000569561 ACEP12821 1306 aa23.74■■□□□ 1.39
EDC3-216ENST00000569561 ATRNO75882 1429 aa23.74■■□□□ 1.39
EDC3-216ENST00000569561 PPIP5K1Q6PFW1 1433 aa23.74■■□□□ 1.39
EDC3-216ENST00000569561 SRPK2P78362 688 aaKnown RBP23.73■■□□□ 1.39
EDC3-216ENST00000569561 RXRBP28702 533 aa23.72■■□□□ 1.39
EDC3-216ENST00000569561 QTRT2Q9H974 415 aaKnown RBP23.72■■□□□ 1.39
EDC3-216ENST00000569561 USP21Q9UK80 565 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms