RNA–Protein interactions for RNA: ENST00000569270.5

CHTF18-218, Transcript of chromosome transmission fidelity factor 18, humanhuman

TSL 5

Gene CHTF18, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTF18-218ENST00000569270 ESCO1Q5FWF5 840 aa28.55■■■□□ 2.16
CHTF18-218ENST00000569270 TECPR2O15040 1411 aa28.54■■■□□ 2.16
CHTF18-218ENST00000569270 SOS2Q07890 1332 aaPredicted RBP28.54■■■□□ 2.16
CHTF18-218ENST00000569270 AFF2P51816 1311 aa28.53■■■□□ 2.16
CHTF18-218ENST00000569270 C8orf37Q96NL8 207 aa28.53■■■□□ 2.16
CHTF18-218ENST00000569270 PLEKHH1Q9ULM0 1364 aa28.52■■■□□ 2.16
CHTF18-218ENST00000569270 NUTM2FA1L443 756 aa28.52■■■□□ 2.16
CHTF18-218ENST00000569270 C14orf93Q9H972 538 aaKnown RBP28.51■■■□□ 2.15
CHTF18-218ENST00000569270 ADAMTS2O95450 1211 aa28.5■■■□□ 2.15
CHTF18-218ENST00000569270 RXRBP28702 533 aa28.5■■■□□ 2.15
CHTF18-218ENST00000569270 CFAP70Q5T0N1 1121 aa28.5■■■□□ 2.15
CHTF18-218ENST00000569270 YTHDC2Q9H6S0 1430 aaKnown RBP28.5■■■□□ 2.15
CHTF18-218ENST00000569270 CDC42BPGQ6DT37 1551 aa28.49■■■□□ 2.15
CHTF18-218ENST00000569270 IFT172Q9UG01 1749 aa28.48■■■□□ 2.15
CHTF18-218ENST00000569270 NPHP3Q7Z494 1330 aa28.46■■■□□ 2.15
CHTF18-218ENST00000569270 FOXO3O43524 673 aa28.46■■■□□ 2.15
CHTF18-218ENST00000569270 XPCQ01831 940 aaPredicted RBP28.45■■■□□ 2.14
CHTF18-218ENST00000569270 MYOM2P54296 1465 aa28.45■■■□□ 2.14
CHTF18-218ENST00000569270 NGLY1Q96IV0 654 aa28.44■■■□□ 2.14
CHTF18-218ENST00000569270 NRXN1Q9ULB1 1477 aa28.44■■■□□ 2.14
CHTF18-218ENST00000569270 DHX57Q6P158 1386 aaKnown RBP28.43■■■□□ 2.14
CHTF18-218ENST00000569270 LAMC1P11047 1609 aa28.43■■■□□ 2.14
CHTF18-218ENST00000569270 SIRT1Q96EB6 747 aa28.42■■■□□ 2.14
CHTF18-218ENST00000569270 QTRT2Q9H974 415 aaKnown RBP28.4■■■□□ 2.14
CHTF18-218ENST00000569270 SAFB2Q14151 953 aaKnown RBP eCLIP28.39■■■□□ 2.14
CHTF18-218ENST00000569270 PRAM1Q96QH2 718 aa28.39■■■□□ 2.14
CHTF18-218ENST00000569270 KDM2AQ9Y2K7 1162 aa28.38■■■□□ 2.13
CHTF18-218ENST00000569270 HRCP23327 699 aa28.37■■■□□ 2.13
CHTF18-218ENST00000569270 PXDNQ92626 1479 aa28.37■■■□□ 2.13
CHTF18-218ENST00000569270 KNDC1Q76NI1 1749 aa28.36■■■□□ 2.13
CHTF18-218ENST00000569270 DCAF11Q8TEB1 546 aa28.35■■■□□ 2.13
CHTF18-218ENST00000569270 RBM6P78332 1123 aaKnown RBP28.34■■■□□ 2.13
CHTF18-218ENST00000569270 POGKQ9P215 609 aa28.34■■■□□ 2.13
CHTF18-218ENST00000569270 USP21Q9UK80 565 aa28.33■■■□□ 2.13
CHTF18-218ENST00000569270 CDK12Q9NYV4 1490 aaPredicted RBP28.33■■■□□ 2.13
CHTF18-218ENST00000569270 UPF1Q92900 1129 aaKnown RBP eCLIP28.31■■■□□ 2.12
CHTF18-218ENST00000569270 TRAK1Q9UPV9 953 aa28.3■■■□□ 2.12
CHTF18-218ENST00000569270 KRT28Q7Z3Y7 464 aa28.29■■■□□ 2.12
CHTF18-218ENST00000569270 FNBP4Q8N3X1 1017 aaPredicted RBP28.29■■■□□ 2.12
CHTF18-218ENST00000569270 PHF8Q9UPP1 1060 aa28.29■■■□□ 2.12
CHTF18-218ENST00000569270 RGS12O14924 1447 aa28.26■■■□□ 2.12
CHTF18-218ENST00000569270 FMN2Q9NZ56 1722 aa28.26■■■□□ 2.12
CHTF18-218ENST00000569270 COL22A1Q8NFW1 1626 aaPredicted RBP28.26■■■□□ 2.11
CHTF18-218ENST00000569270 SPATA31A3Q5VYP0 1347 aa28.26■■■□□ 2.11
CHTF18-218ENST00000569270 TRPC5Q9UL62 973 aaPredicted RBP28.26■■■□□ 2.11
CHTF18-218ENST00000569270 ADGRB1O14514 1584 aa28.24■■■□□ 2.11
CHTF18-218ENST00000569270 DLC1Q96QB1 1528 aa28.24■■■□□ 2.11
CHTF18-218ENST00000569270 STAC3Q96MF2 364 aa28.24■■■□□ 2.11
CHTF18-218ENST00000569270 HIRIP3Q9BW71 556 aaPredicted RBP28.23■■■□□ 2.11
CHTF18-218ENST00000569270 PSME1Q06323 249 aa28.22■■■□□ 2.11
CHTF18-218ENST00000569270 MINK1Q8N4C8 1332 aaPredicted RBP28.21■■■□□ 2.11
CHTF18-218ENST00000569270 PLEKHG5O94827 1062 aa28.2■■■□□ 2.1
CHTF18-218ENST00000569270 PMFBP1Q8TBY8 1022 aa28.2■■■□□ 2.1
CHTF18-218ENST00000569270 KIF1AQ12756 1690 aa28.19■■■□□ 2.1
CHTF18-218ENST00000569270 ATRNO75882 1429 aa28.18■■■□□ 2.1
CHTF18-218ENST00000569270 HAP1P54257 671 aaPredicted RBP28.17■■■□□ 2.1
CHTF18-218ENST00000569270 LMOD2Q6P5Q4 547 aa28.17■■■□□ 2.1
CHTF18-218ENST00000569270 ANKARQ7Z5J8 1434 aa28.17■■■□□ 2.1
CHTF18-218ENST00000569270 TNS3Q68CZ2 1445 aa28.16■■■□□ 2.1
CHTF18-218ENST00000569270 BCL9LQ86UU0 1499 aa28.15■■■□□ 2.1
CHTF18-218ENST00000569270 CABLES1Q8TDN4 633 aa28.15■■■□□ 2.1
CHTF18-218ENST00000569270 SBNO1A3KN83 1393 aa28.13■■■□□ 2.09
CHTF18-218ENST00000569270 WASLO00401 505 aaPredicted RBP28.12■■■□□ 2.09
CHTF18-218ENST00000569270 PRR36Q9H6K5 1346 aa28.12■■■□□ 2.09
CHTF18-218ENST00000569270 ADGRB2O60241 1585 aa28.11■■■□□ 2.09
CHTF18-218ENST00000569270 EIF3AQ14152 1382 aaKnown RBP28.11■■■□□ 2.09
CHTF18-218ENST00000569270 GJD4Q96KN9 370 aaPredicted RBP28.1■■■□□ 2.09
CHTF18-218ENST00000569270 UNC5CLQ8IV45 518 aa28.09■■■□□ 2.09
CHTF18-218ENST00000569270 ARHGEF10O15013 1369 aa28.09■■■□□ 2.09
CHTF18-218ENST00000569270 ATAD2Q6PL18 1390 aa28.07■■■□□ 2.08
CHTF18-218ENST00000569270 USP32Q8NFA0 1604 aa28.07■■■□□ 2.08
CHTF18-218ENST00000569270 GPRASP1Q5JY77 1395 aa28.06■■■□□ 2.08
CHTF18-218ENST00000569270 SLIT2O94813 1529 aa28.05■■■□□ 2.08
CHTF18-218ENST00000569270 TULP4Q9NRJ4 1543 aa28.05■■■□□ 2.08
CHTF18-218ENST00000569270 NGDNQ8NEJ9 315 aaKnown RBP28.04■■■□□ 2.08
CHTF18-218ENST00000569270 RGPD8O14715 1765 aaPredicted RBP28.03■■■□□ 2.08
CHTF18-218ENST00000569270 NBPF1Q3BBV0 1214 aa28■■■□□ 2.07
CHTF18-218ENST00000569270 NUDT16Q96DE0 195 aaKnown RBP28■■■□□ 2.07
CHTF18-218ENST00000569270 PAK3O75914 559 aaPredicted RBP27.99■■■□□ 2.07
CHTF18-218ENST00000569270 CDK19Q9BWU1 502 aa27.99■■■□□ 2.07
CHTF18-218ENST00000569270 RALGAPBQ86X10 1494 aa27.99■■■□□ 2.07
CHTF18-218ENST00000569270 FAM83GA6ND36 823 aa27.98■■■□□ 2.07
CHTF18-218ENST00000569270 CCDC9Q9Y3X0 531 aaKnown RBP27.97■■■□□ 2.07
CHTF18-218ENST00000569270 MARF1Q9Y4F3 1742 aaKnown RBP27.97■■■□□ 2.07
CHTF18-218ENST00000569270 VPS72Q15906 364 aa27.96■■■□□ 2.07
CHTF18-218ENST00000569270 ATP7BP35670 1465 aa27.94■■■□□ 2.06
CHTF18-218ENST00000569270 ARHGEF28Q8N1W1 1705 aaKnown RBP27.92■■■□□ 2.06
CHTF18-218ENST00000569270 GLI3P10071 1580 aa27.91■■■□□ 2.06
CHTF18-218ENST00000569270 SEPT12Q8IYM1 358 aa27.9■■■□□ 2.06
CHTF18-218ENST00000569270 L3MBTL2Q969R5 705 aa27.9■■■□□ 2.06
CHTF18-218ENST00000569270 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.89■■■□□ 2.06
CHTF18-218ENST00000569270 SIN3AQ96ST3 1273 aa27.89■■■□□ 2.06
CHTF18-218ENST00000569270 BTG4Q9NY30 223 aa27.89■■■□□ 2.06
CHTF18-218ENST00000569270 CCDC61Q9Y6R9 512 aa27.89■■■□□ 2.06
CHTF18-218ENST00000569270 TRPM3Q9HCF6 1732 aaPredicted RBP27.89■■■□□ 2.05
CHTF18-218ENST00000569270 NEUROD1Q13562 356 aa27.86■■■□□ 2.05
CHTF18-218ENST00000569270 ACEP12821 1306 aa27.86■■■□□ 2.05
CHTF18-218ENST00000569270 CENPJQ9HC77 1338 aaPredicted RBP27.86■■■□□ 2.05
CHTF18-218ENST00000569270 ABCA3Q99758 1704 aa27.85■■■□□ 2.05
CHTF18-218ENST00000569270 SRPK2P78362 688 aaKnown RBP27.85■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms