RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 KLHL34Q8N239 644 aa8.52□□□□□ -1.05
CNOT1-216ENST00000569240 KIF18AQ8NI77 898 aa8.52□□□□□ -1.05
CNOT1-216ENST00000569240 A6NNZ2 444 aa8.51□□□□□ -1.05
CNOT1-216ENST00000569240 TUBB8Q3ZCM7 444 aa8.51□□□□□ -1.05
CNOT1-216ENST00000569240 CCDC91Q7Z6B0 441 aa8.51□□□□□ -1.05
CNOT1-216ENST00000569240 LUC7LQ9NQ29 371 aaKnown RBP8.51□□□□□ -1.05
CNOT1-216ENST00000569240 PAIP2Q9BPZ3 127 aaKnown RBP8.51□□□□□ -1.05
CNOT1-216ENST00000569240 DACH1Q9UI36 760 aa8.51□□□□□ -1.05
CNOT1-216ENST00000569240 CARMIL1Q5VZK9 1371 aa8.51□□□□□ -1.05
CNOT1-216ENST00000569240 OLFM4Q6UX06 510 aa8.51□□□□□ -1.05
CNOT1-216ENST00000569240 BICD2Q8TD16 824 aa8.51□□□□□ -1.05
CNOT1-216ENST00000569240 RTF1Q92541 710 aaKnown RBP8.51□□□□□ -1.05
CNOT1-216ENST00000569240 SRRTQ9BXP5 876 aaKnown RBP8.51□□□□□ -1.05
CNOT1-216ENST00000569240 NAP1L2Q9ULW6 460 aaPredicted RBP8.51□□□□□ -1.05
CNOT1-216ENST00000569240 GTF2A1P52655 376 aaPredicted RBP8.51□□□□□ -1.05
CNOT1-216ENST00000569240 PSMA5P28066 241 aa8.5□□□□□ -1.05
CNOT1-216ENST00000569240 DYDC1Q8WWB3 177 aa8.5□□□□□ -1.05
CNOT1-216ENST00000569240 USP47Q96K76 1375 aa8.5□□□□□ -1.05
CNOT1-216ENST00000569240 ZSCAN12O43309 604 aa8.5□□□□□ -1.05
CNOT1-216ENST00000569240 ERLIN2O94905 339 aa8.5□□□□□ -1.05
CNOT1-216ENST00000569240 U2AF1L5P0DN76 240 aaPredicted RBP8.5□□□□□ -1.05
CNOT1-216ENST00000569240 U2AF1Q01081 240 aaKnown RBP eCLIP8.5□□□□□ -1.054e-7■■□□□ 13.9
CNOT1-216ENST00000569240 TPRNQ4KMQ1 711 aa8.5□□□□□ -1.05
CNOT1-216ENST00000569240 TRIM6-TRIM34B2RNG4 842 aa8.5□□□□□ -1.05
CNOT1-216ENST00000569240 UTP14CQ5TAP6 766 aaKnown RBP8.5□□□□□ -1.05
CNOT1-216ENST00000569240 SOGA1O94964 1423 aa8.49□□□□□ -1.05
CNOT1-216ENST00000569240 GSDMDP57764 484 aa8.49□□□□□ -1.05
CNOT1-216ENST00000569240 RRBP1Q9P2E9 1410 aaKnown RBP8.49□□□□□ -1.05
CNOT1-216ENST00000569240 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.49□□□□□ -1.053e-6■□□□□ 9.8
CNOT1-216ENST00000569240 KLHL40Q2TBA0 621 aa8.49□□□□□ -1.05
CNOT1-216ENST00000569240 FILIP1LQ4L180 1135 aa8.49□□□□□ -1.05
CNOT1-216ENST00000569240 SH3BGRP55822 239 aaPredicted RBP8.49□□□□□ -1.05
CNOT1-216ENST00000569240 OGFRQ9NZT2 677 aa8.49□□□□□ -1.05
CNOT1-216ENST00000569240 CCDC171Q6TFL3 1326 aa8.49□□□□□ -1.05
CNOT1-216ENST00000569240 ATAD2Q6PL18 1390 aa8.49□□□□□ -1.05
CNOT1-216ENST00000569240 ANKRD45Q5TZF3 282 aa8.49□□□□□ -1.05
CNOT1-216ENST00000569240 TERF2IPQ9NYB0 399 aa8.49□□□□□ -1.05
CNOT1-216ENST00000569240 RGL3Q3MIN7 710 aa8.48□□□□□ -1.05
CNOT1-216ENST00000569240 HIP1O00291 1037 aa8.48□□□□□ -1.05
CNOT1-216ENST00000569240 HDGFP51858 240 aaKnown RBP8.48□□□□□ -1.05
CNOT1-216ENST00000569240 ZNF396Q96N95 335 aaPredicted RBP8.48□□□□□ -1.05
CNOT1-216ENST00000569240 PKD2Q13563 968 aa8.48□□□□□ -1.05
CNOT1-216ENST00000569240 KINO60870 393 aaKnown RBP8.48□□□□□ -1.05
CNOT1-216ENST00000569240 JMYQ8N9B5 988 aa8.48□□□□□ -1.05
CNOT1-216ENST00000569240 CCDC83Q8IWF9 413 aa8.48□□□□□ -1.05
CNOT1-216ENST00000569240 ZSCAN31Q96LW9 406 aaPredicted RBP8.48□□□□□ -1.05
CNOT1-216ENST00000569240 ANKRD1Q15327 319 aa8.48□□□□□ -1.05
CNOT1-216ENST00000569240 NOL10Q9BSC4 688 aaKnown RBP8.48□□□□□ -1.05
CNOT1-216ENST00000569240 HSP90AB3PQ58FF7 597 aa8.47□□□□□ -1.05
CNOT1-216ENST00000569240 SMTNL1A8MU46 457 aa8.47□□□□□ -1.05
CNOT1-216ENST00000569240 CUX1P39880 1505 aa8.47□□□□□ -1.05
CNOT1-216ENST00000569240 PTPN14Q15678 1187 aa8.47□□□□□ -1.05
CNOT1-216ENST00000569240 DNAAF4Q8WXU2 420 aa8.47□□□□□ -1.05
CNOT1-216ENST00000569240 CTAGE5O15320 804 aa8.47□□□□□ -1.05
CNOT1-216ENST00000569240 AKNAQ7Z591 1439 aa8.46□□□□□ -1.05
CNOT1-216ENST00000569240 ERC2O15083 957 aa8.46□□□□□ -1.05
CNOT1-216ENST00000569240 CEP57L1Q8IYX8 460 aa8.46□□□□□ -1.05
CNOT1-216ENST00000569240 ZKSCAN5Q9Y2L8 839 aa8.46□□□□□ -1.05
CNOT1-216ENST00000569240 NPM1P06748 294 aaKnown RBP eCLIP8.46□□□□□ -1.06
CNOT1-216ENST00000569240 TRIM29Q14134 588 aa8.46□□□□□ -1.06
CNOT1-216ENST00000569240 RASSF4Q9H2L5 321 aa8.46□□□□□ -1.06
CNOT1-216ENST00000569240 KRT85P78386 507 aa8.46□□□□□ -1.06
CNOT1-216ENST00000569240 RUNDC1Q96C34 613 aa8.46□□□□□ -1.06
CNOT1-216ENST00000569240 COG6Q9Y2V7 657 aa8.46□□□□□ -1.06
CNOT1-216ENST00000569240 ZBTB7CA1YPR0 619 aa8.45□□□□□ -1.06
CNOT1-216ENST00000569240 POGKQ9P215 609 aa8.45□□□□□ -1.06
CNOT1-216ENST00000569240 POLA1P09884 1462 aaPredicted RBP8.45□□□□□ -1.06
CNOT1-216ENST00000569240 CCDC183Q5T5S1 534 aa8.45□□□□□ -1.06
CNOT1-216ENST00000569240 ZNF622Q969S3 477 aaKnown RBP eCLIP8.45□□□□□ -1.066e-7■□□□□ 9.1
CNOT1-216ENST00000569240 LRRCC1Q9C099 1032 aa8.45□□□□□ -1.06
CNOT1-216ENST00000569240 PATL2C9JE40 543 aaKnown RBP8.45□□□□□ -1.06
CNOT1-216ENST00000569240 PRPF40AO75400 957 aaKnown RBP8.45□□□□□ -1.06
CNOT1-216ENST00000569240 FOXD4L1Q9NU39 408 aa8.45□□□□□ -1.06
CNOT1-216ENST00000569240 SLC26A8Q96RN1 970 aa8.44□□□□□ -1.06
CNOT1-216ENST00000569240 CRACR2AQ9BSW2 395 aa8.44□□□□□ -1.06
CNOT1-216ENST00000569240 PPP4R3BQ5MIZ7 849 aa8.44□□□□□ -1.06
CNOT1-216ENST00000569240 KANK4Q5T7N3 995 aaPredicted RBP8.44□□□□□ -1.06
CNOT1-216ENST00000569240 KCNH8Q96L42 1107 aa8.44□□□□□ -1.06
CNOT1-216ENST00000569240 LIG1P18858 919 aa8.44□□□□□ -1.06
CNOT1-216ENST00000569240 NF2P35240 595 aa8.44□□□□□ -1.06
CNOT1-216ENST00000569240 A0A1B0GUL7 405 aa8.44□□□□□ -1.06
CNOT1-216ENST00000569240 NUTM1Q86Y26 1132 aa8.44□□□□□ -1.06
CNOT1-216ENST00000569240 SYNE3Q6ZMZ3 975 aa8.44□□□□□ -1.06
CNOT1-216ENST00000569240 ANKRD18AQ8IVF6 992 aa8.44□□□□□ -1.06
CNOT1-216ENST00000569240 A0A1B0GUA9 196 aa8.43□□□□□ -1.06
CNOT1-216ENST00000569240 SMC2O95347 1197 aa8.43□□□□□ -1.06
CNOT1-216ENST00000569240 TDO2P48775 406 aa8.43□□□□□ -1.06
CNOT1-216ENST00000569240 SRCIN1Q9C0H9 1055 aa8.43□□□□□ -1.06
CNOT1-216ENST00000569240 CFAP45Q9UL16 551 aa8.43□□□□□ -1.06
CNOT1-216ENST00000569240 DHX16O60231 1041 aaKnown RBP8.43□□□□□ -1.06
CNOT1-216ENST00000569240 CBX1P83916 185 aa8.43□□□□□ -1.06
CNOT1-216ENST00000569240 ZNF397Q8NF99 534 aaPredicted RBP8.43□□□□□ -1.06
CNOT1-216ENST00000569240 SDF4Q9BRK5 362 aa8.43□□□□□ -1.06
CNOT1-216ENST00000569240 KIF3BO15066 747 aa8.43□□□□□ -1.06
CNOT1-216ENST00000569240 NUP155O75694 1391 aa8.43□□□□□ -1.06
CNOT1-216ENST00000569240 ZNHIT6Q9NWK9 470 aaKnown RBP8.43□□□□□ -1.06
CNOT1-216ENST00000569240 SAFBQ15424 915 aaKnown RBP eCLIP8.43□□□□□ -1.06
CNOT1-216ENST00000569240 CCDC50Q8IVM0 306 aa8.43□□□□□ -1.06
CNOT1-216ENST00000569240 CCDC146Q8IYE0 955 aa8.43□□□□□ -1.06
CNOT1-216ENST00000569240 PPP6R1Q9UPN7 881 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 182 ms