RNA–Protein interactions for RNA: ENST00000568900.5

SPNS1-212, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 2

Gene SPNS1, Length 2,253 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-212ENST00000568900 ABCC11Q96J66 1382 aa28.26■■■□□ 2.11
SPNS1-212ENST00000568900 ADAMTSL3P82987 1691 aa28.25■■■□□ 2.11
SPNS1-212ENST00000568900 NPC1L1Q9UHC9 1359 aa28.24■■■□□ 2.11
SPNS1-212ENST00000568900 SRPK2P78362 688 aaKnown RBP28.24■■■□□ 2.11
SPNS1-212ENST00000568900 EID1Q9Y6B2 187 aa28.24■■■□□ 2.11
SPNS1-212ENST00000568900 SLIT1O75093 1534 aa28.24■■■□□ 2.11
SPNS1-212ENST00000568900 PLEKHG1Q9ULL1 1385 aa28.24■■■□□ 2.11
SPNS1-212ENST00000568900 WAPLQ7Z5K2 1190 aa28.23■■■□□ 2.11
SPNS1-212ENST00000568900 ARHGAP23Q9P227 1491 aa28.22■■■□□ 2.11
SPNS1-212ENST00000568900 THEMISQ8N1K5 641 aaPredicted RBP28.22■■■□□ 2.11
SPNS1-212ENST00000568900 ADAMTS13Q76LX8 1427 aa28.22■■■□□ 2.11
SPNS1-212ENST00000568900 PLEKHH1Q9ULM0 1364 aa28.21■■■□□ 2.11
SPNS1-212ENST00000568900 KNDC1Q76NI1 1749 aa28.21■■■□□ 2.11
SPNS1-212ENST00000568900 NSD3Q9BZ95 1437 aa28.2■■■□□ 2.1
SPNS1-212ENST00000568900 CEP170BQ9Y4F5 1589 aaPredicted RBP28.18■■■□□ 2.1
SPNS1-212ENST00000568900 PPP2R1AP30153 589 aa28.17■■■□□ 2.1
SPNS1-212ENST00000568900 CDK19Q9BWU1 502 aa28.16■■■□□ 2.1
SPNS1-212ENST00000568900 ATAD2Q6PL18 1390 aa28.16■■■□□ 2.1
SPNS1-212ENST00000568900 TECPR2O15040 1411 aa28.15■■■□□ 2.1
SPNS1-212ENST00000568900 ANKRD36BQ8N2N9 1353 aa28.15■■■□□ 2.1
SPNS1-212ENST00000568900 CPS1P31327 1500 aa28.14■■■□□ 2.1
SPNS1-212ENST00000568900 ZBED9Q6R2W3 1325 aa28.14■■■□□ 2.1
SPNS1-212ENST00000568900 NINLQ9Y2I6 1382 aa28.14■■■□□ 2.09
SPNS1-212ENST00000568900 SLC26A8Q96RN1 970 aa28.13■■■□□ 2.09
SPNS1-212ENST00000568900 MED14O60244 1454 aa28.12■■■□□ 2.09
SPNS1-212ENST00000568900 FAM135BQ49AJ0 1406 aa28.12■■■□□ 2.09
SPNS1-212ENST00000568900 USP32Q8NFA0 1604 aa28.11■■■□□ 2.09
SPNS1-212ENST00000568900 SIRT1Q96EB6 747 aa28.1■■■□□ 2.09
SPNS1-212ENST00000568900 A0A1W2PP64 1363 aa28.08■■■□□ 2.09
SPNS1-212ENST00000568900 ZNF142P52746 1687 aaPredicted RBP28.07■■■□□ 2.08
SPNS1-212ENST00000568900 ROBO2Q9HCK4 1378 aa28.07■■■□□ 2.08
SPNS1-212ENST00000568900 CGNL1Q0VF96 1302 aa28.06■■■□□ 2.08
SPNS1-212ENST00000568900 SETD1BQ9UPS6 1966 aaKnown RBP28.05■■■□□ 2.08
SPNS1-212ENST00000568900 TBX22Q9Y458 520 aa28.04■■■□□ 2.08
SPNS1-212ENST00000568900 PTPRUQ92729 1446 aa28.04■■■□□ 2.08
SPNS1-212ENST00000568900 SENP3-EIF4A1A0A087X0R7 540 aa28.04■■■□□ 2.08
SPNS1-212ENST00000568900 WASLO00401 505 aaPredicted RBP28.04■■■□□ 2.08
SPNS1-212ENST00000568900 TERF2IPQ9NYB0 399 aa28.04■■■□□ 2.08
SPNS1-212ENST00000568900 DIP2AQ14689 1571 aa28.03■■■□□ 2.08
SPNS1-212ENST00000568900 MORC1Q86VD1 984 aa28.03■■■□□ 2.08
SPNS1-212ENST00000568900 CD163L1Q9NR16 1453 aa28.03■■■□□ 2.08
SPNS1-212ENST00000568900 CABP1Q9NZU7 370 aa28.02■■■□□ 2.08
SPNS1-212ENST00000568900 HDGFL2Q7Z4V5 671 aaPredicted RBP27.99■■■□□ 2.07
SPNS1-212ENST00000568900 AMOTL2Q9Y2J4 779 aa27.99■■■□□ 2.07
SPNS1-212ENST00000568900 NSD2O96028 1365 aa27.98■■■□□ 2.07
SPNS1-212ENST00000568900 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.98■■■□□ 2.07
SPNS1-212ENST00000568900 TNNT2P45379 298 aaPredicted RBP27.97■■■□□ 2.07
SPNS1-212ENST00000568900 WDR43Q15061 677 aaKnown RBP eCLIP27.95■■■□□ 2.07
SPNS1-212ENST00000568900 ANKLE2Q86XL3 938 aa27.95■■■□□ 2.07
SPNS1-212ENST00000568900 BLMP54132 1417 aaPredicted RBP27.95■■■□□ 2.06
SPNS1-212ENST00000568900 ATP7BP35670 1465 aa27.94■■■□□ 2.06
SPNS1-212ENST00000568900 INSRP06213 1382 aa27.94■■■□□ 2.06
SPNS1-212ENST00000568900 ADAMTS8Q9UP79 889 aa27.94■■■□□ 2.06
SPNS1-212ENST00000568900 ADGRB2O60241 1585 aa27.93■■■□□ 2.06
SPNS1-212ENST00000568900 NUDT16Q96DE0 195 aaKnown RBP27.93■■■□□ 2.06
SPNS1-212ENST00000568900 PPIP5K1Q6PFW1 1433 aa27.93■■■□□ 2.06
SPNS1-212ENST00000568900 PTCH1Q13635 1447 aa27.92■■■□□ 2.06
SPNS1-212ENST00000568900 XRN1Q8IZH2 1706 aaKnown RBP27.91■■■□□ 2.06
SPNS1-212ENST00000568900 GGNBP2Q9H3C7 697 aa27.89■■■□□ 2.06
SPNS1-212ENST00000568900 ANKRD26Q9UPS8 1709 aa27.89■■■□□ 2.06
SPNS1-212ENST00000568900 CCDC61Q9Y6R9 512 aa27.88■■■□□ 2.05
SPNS1-212ENST00000568900 KIF20BQ96Q89 1820 aa27.88■■■□□ 2.05
SPNS1-212ENST00000568900 NCKAP5LQ9HCH0 1330 aa27.88■■■□□ 2.05
SPNS1-212ENST00000568900 SALL2Q9Y467 1007 aaPredicted RBP27.88■■■□□ 2.05
SPNS1-212ENST00000568900 FYB1O15117 783 aa27.87■■■□□ 2.05
SPNS1-212ENST00000568900 POLR3AO14802 1390 aaPredicted RBP27.87■■■□□ 2.05
SPNS1-212ENST00000568900 PRR36Q9H6K5 1346 aa27.87■■■□□ 2.05
SPNS1-212ENST00000568900 PIK3R4Q99570 1358 aa27.86■■■□□ 2.05
SPNS1-212ENST00000568900 CDC42BPGQ6DT37 1551 aa27.85■■■□□ 2.05
SPNS1-212ENST00000568900 CPSF1Q10570 1443 aaKnown RBP27.85■■■□□ 2.05
SPNS1-212ENST00000568900 SUPT16HQ9Y5B9 1047 aaKnown RBP27.84■■■□□ 2.05
SPNS1-212ENST00000568900 KCNA6P17658 529 aa27.84■■■□□ 2.05
SPNS1-212ENST00000568900 MTHFSP49914 203 aa27.83■■■□□ 2.05
SPNS1-212ENST00000568900 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.83■■■□□ 2.05
SPNS1-212ENST00000568900 NEFLP07196 543 aa27.83■■■□□ 2.04
SPNS1-212ENST00000568900 SMG6Q86US8 1419 aaKnown RBP27.83■■■□□ 2.04
SPNS1-212ENST00000568900 ITSN1Q15811 1721 aa27.82■■■□□ 2.04
SPNS1-212ENST00000568900 NUTM2FA1L443 756 aa27.81■■■□□ 2.04
SPNS1-212ENST00000568900 FKBP8Q14318 412 aa27.81■■■□□ 2.04
SPNS1-212ENST00000568900 AKAP12Q02952 1782 aa27.81■■■□□ 2.04
SPNS1-212ENST00000568900 CHD2O14647 1828 aaKnown RBP27.8■■■□□ 2.04
SPNS1-212ENST00000568900 TOPAZ1Q8N9V7 1692 aa27.8■■■□□ 2.04
SPNS1-212ENST00000568900 MON2Q7Z3U7 1717 aa27.8■■■□□ 2.04
SPNS1-212ENST00000568900 NUDCQ9Y266 331 aa27.8■■■□□ 2.04
SPNS1-212ENST00000568900 SHPRHQ149N8 1683 aa27.8■■■□□ 2.04
SPNS1-212ENST00000568900 EDC4Q6P2E9 1401 aaKnown RBP27.8■■■□□ 2.04
SPNS1-212ENST00000568900 NPHP4O75161 1426 aaPredicted RBP27.78■■■□□ 2.04
SPNS1-212ENST00000568900 CFAP53Q96M91 514 aa27.77■■■□□ 2.04
SPNS1-212ENST00000568900 CCDC146Q8IYE0 955 aa27.75■■■□□ 2.03
SPNS1-212ENST00000568900 ZNF692Q9BU19 519 aaPredicted RBP27.73■■■□□ 2.03
SPNS1-212ENST00000568900 NKTRP30414 1462 aaKnown RBP27.72■■■□□ 2.03
SPNS1-212ENST00000568900 RGPD8O14715 1765 aaPredicted RBP27.71■■■□□ 2.03
SPNS1-212ENST00000568900 ACEP12821 1306 aa27.71■■■□□ 2.03
SPNS1-212ENST00000568900 PDE3BQ13370 1112 aa27.71■■■□□ 2.03
SPNS1-212ENST00000568900 NME9Q86XW9 330 aa27.71■■■□□ 2.03
SPNS1-212ENST00000568900 PLEKHG3A1L390 1219 aa27.7■■■□□ 2.03
SPNS1-212ENST00000568900 CDCA7LQ96GN5 454 aa27.66■■■□□ 2.02
SPNS1-212ENST00000568900 ZRANB1Q9UGI0 708 aa27.66■■■□□ 2.02
SPNS1-212ENST00000568900 NALCNQ8IZF0 1738 aa27.66■■■□□ 2.02
SPNS1-212ENST00000568900 NRKQ7Z2Y5 1582 aa27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms