RNA–Protein interactions for RNA: ENST00000568883.5

PKM-222, Transcript of pyruvate kinase M1/2, humanhuman

TSL 5 BASIC

Gene PKM, Length 1,863 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-222ENST00000568883 ZC3H13Q5T200 1668 aaKnown RBP16.5■□□□□ 0.23
PKM-222ENST00000568883 CFAP53Q96M91 514 aa16.5■□□□□ 0.23
PKM-222ENST00000568883 C20orf194Q5TEA3 1177 aa16.48■□□□□ 0.23
PKM-222ENST00000568883 DDRGK1Q96HY6 314 aa16.48■□□□□ 0.23
PKM-222ENST00000568883 PIK3C2BO00750 1634 aa16.48■□□□□ 0.23
PKM-222ENST00000568883 PAK3O75914 559 aaPredicted RBP16.48■□□□□ 0.23
PKM-222ENST00000568883 ZFYVE9O95405 1425 aa16.48■□□□□ 0.23
PKM-222ENST00000568883 NCBP3Q53F19 620 aaKnown RBP16.47■□□□□ 0.23
PKM-222ENST00000568883 SLC52A1Q9NWF4 448 aa16.47■□□□□ 0.23
PKM-222ENST00000568883 DIP2CQ9Y2E4 1556 aa16.46■□□□□ 0.23
PKM-222ENST00000568883 RUNDC1Q96C34 613 aa16.46■□□□□ 0.23
PKM-222ENST00000568883 GLI2P10070 1586 aa16.46■□□□□ 0.23
PKM-222ENST00000568883 ANKRD36BQ8N2N9 1353 aa16.46■□□□□ 0.23
PKM-222ENST00000568883 PDE3AQ14432 1141 aa16.45■□□□□ 0.22
PKM-222ENST00000568883 RTL5Q5HYW3 569 aaPredicted RBP16.45■□□□□ 0.22
PKM-222ENST00000568883 NPM2Q86SE8 214 aaKnown RBP16.45■□□□□ 0.22
PKM-222ENST00000568883 SLC12A5Q9H2X9 1139 aa16.45■□□□□ 0.22
PKM-222ENST00000568883 NEXMIFQ5QGS0 1516 aa16.45■□□□□ 0.22
PKM-222ENST00000568883 AAMPQ13685 434 aa16.44■□□□□ 0.22
PKM-222ENST00000568883 TMEM132EQ6IEE7 984 aa16.44■□□□□ 0.22
PKM-222ENST00000568883 WWC1Q8IX03 1113 aa16.44■□□□□ 0.22
PKM-222ENST00000568883 WDR63Q8IWG1 891 aa16.42■□□□□ 0.22
PKM-222ENST00000568883 RAPGEF3O95398 923 aa16.42■□□□□ 0.22
PKM-222ENST00000568883 CCDC27Q2M243 656 aa16.42■□□□□ 0.22
PKM-222ENST00000568883 CANXP27824 592 aaKnown RBP16.41■□□□□ 0.22
PKM-222ENST00000568883 SPINK5Q9NQ38 1064 aaPredicted RBP16.41■□□□□ 0.22
PKM-222ENST00000568883 FAM161AQ3B820 660 aa16.4■□□□□ 0.22
PKM-222ENST00000568883 IQSEC2Q5JU85 1478 aa16.4■□□□□ 0.22
PKM-222ENST00000568883 TULP4Q9NRJ4 1543 aa16.4■□□□□ 0.22
PKM-222ENST00000568883 SHPRHQ149N8 1683 aa16.39■□□□□ 0.21
PKM-222ENST00000568883 ARHGEF28Q8N1W1 1705 aaKnown RBP16.39■□□□□ 0.21
PKM-222ENST00000568883 NBR1Q14596 966 aa16.39■□□□□ 0.21
PKM-222ENST00000568883 SIGLEC1Q9BZZ2 1709 aa16.39■□□□□ 0.21
PKM-222ENST00000568883 ATAD2Q6PL18 1390 aa16.38■□□□□ 0.21
PKM-222ENST00000568883 MTHFSP49914 203 aa16.38■□□□□ 0.21
PKM-222ENST00000568883 PHF23Q9BUL5 403 aaPredicted RBP16.38■□□□□ 0.21
PKM-222ENST00000568883 BCAR3O75815 825 aa16.37■□□□□ 0.21
PKM-222ENST00000568883 IDI1Q13907 227 aa16.37■□□□□ 0.21
PKM-222ENST00000568883 TCP11L2Q8N4U5 519 aa16.37■□□□□ 0.21
PKM-222ENST00000568883 RICTORQ6R327 1708 aa16.37■□□□□ 0.21
PKM-222ENST00000568883 PPM1GO15355 546 aaPredicted RBP16.37■□□□□ 0.21
PKM-222ENST00000568883 TNNT2P45379 298 aaPredicted RBP16.37■□□□□ 0.21
PKM-222ENST00000568883 MYH16Q9H6N6 1097 aa16.37■□□□□ 0.21
PKM-222ENST00000568883 USP35Q9P2H5 1018 aa16.36■□□□□ 0.21
PKM-222ENST00000568883 ABCC11Q96J66 1382 aa16.35■□□□□ 0.21
PKM-222ENST00000568883 TERF2IPQ9NYB0 399 aa16.35■□□□□ 0.21
PKM-222ENST00000568883 CT47B1P0C2W7 299 aaPredicted RBP16.34■□□□□ 0.21
PKM-222ENST00000568883 DEKP35659 375 aaKnown RBP16.34■□□□□ 0.21
PKM-222ENST00000568883 CLUAP1Q96AJ1 413 aa16.34■□□□□ 0.21
PKM-222ENST00000568883 DAXXQ9UER7 740 aaPredicted RBP16.34■□□□□ 0.21
PKM-222ENST00000568883 PPP6R1Q9UPN7 881 aa16.33■□□□□ 0.21
PKM-222ENST00000568883 DMRT2Q9Y5R5 561 aa16.33■□□□□ 0.21
PKM-222ENST00000568883 MAPK8IP3Q9UPT6 1336 aa16.33■□□□□ 0.21
PKM-222ENST00000568883 MED14O60244 1454 aa16.33■□□□□ 0.2
PKM-222ENST00000568883 SRPK2P78362 688 aaKnown RBP16.33■□□□□ 0.2
PKM-222ENST00000568883 CABP2Q9NPB3 220 aa16.33■□□□□ 0.2
PKM-222ENST00000568883 YEATS2Q9ULM3 1422 aa16.32■□□□□ 0.2
PKM-222ENST00000568883 NUTM2DQ5VT03 806 aaPredicted RBP16.32■□□□□ 0.2
PKM-222ENST00000568883 CFAP65Q6ZU64 1925 aaKnown RBP16.32■□□□□ 0.2
PKM-222ENST00000568883 U2AF1L5P0DN76 240 aaPredicted RBP16.31■□□□□ 0.2
PKM-222ENST00000568883 RARSP54136 660 aaKnown RBP16.31■□□□□ 0.2
PKM-222ENST00000568883 U2AF1Q01081 240 aaKnown RBP eCLIP16.31■□□□□ 0.22e-6■□□□□ 9
PKM-222ENST00000568883 NEUROD2Q15784 382 aa16.31■□□□□ 0.2
PKM-222ENST00000568883 PMFBP1Q8TBY8 1022 aa16.31■□□□□ 0.2
PKM-222ENST00000568883 PNNQ9H307 717 aaKnown RBP16.31■□□□□ 0.2
PKM-222ENST00000568883 TMEM131LA2VDJ0 1609 aa16.31■□□□□ 0.2
PKM-222ENST00000568883 PREX1Q8TCU6 1659 aa16.31■□□□□ 0.2
PKM-222ENST00000568883 A0A1W2PP64 1363 aa16.31■□□□□ 0.2
PKM-222ENST00000568883 C8orf34Q49A92 452 aa16.3■□□□□ 0.2
PKM-222ENST00000568883 YTHDC2Q9H6S0 1430 aaKnown RBP16.3■□□□□ 0.2
PKM-222ENST00000568883 POGKQ9P215 609 aa16.3■□□□□ 0.2
PKM-222ENST00000568883 PTPRMP28827 1452 aa16.29■□□□□ 0.2
PKM-222ENST00000568883 HDGFL2Q7Z4V5 671 aaPredicted RBP16.29■□□□□ 0.2
PKM-222ENST00000568883 RRP7AQ9Y3A4 280 aaKnown RBP16.29■□□□□ 0.2
PKM-222ENST00000568883 ADGRB2O60241 1585 aa16.29■□□□□ 0.2
PKM-222ENST00000568883 ZMYM3Q14202 1370 aa16.29■□□□□ 0.2
PKM-222ENST00000568883 RGS3P49796 1198 aa16.29■□□□□ 0.2
PKM-222ENST00000568883 FAM69CQ0P6D2 419 aa16.29■□□□□ 0.2
PKM-222ENST00000568883 SKAP1Q86WV1 359 aa16.29■□□□□ 0.2
PKM-222ENST00000568883 FRAT1Q92837 279 aaPredicted RBP16.28■□□□□ 0.2
PKM-222ENST00000568883 BCL11AQ9H165 835 aa16.28■□□□□ 0.2
PKM-222ENST00000568883 STK26Q9P289 416 aa16.28■□□□□ 0.2
PKM-222ENST00000568883 CLTCQ00610 1675 aaKnown RBP16.28■□□□□ 0.2
PKM-222ENST00000568883 COG6Q9Y2V7 657 aa16.27■□□□□ 0.2
PKM-222ENST00000568883 REREQ9P2R6 1566 aa16.27■□□□□ 0.19
PKM-222ENST00000568883 SAFB2Q14151 953 aaKnown RBP eCLIP16.27■□□□□ 0.19
PKM-222ENST00000568883 PRAM1Q96QH2 718 aa16.27■□□□□ 0.19
PKM-222ENST00000568883 STAG3Q9UJ98 1225 aa16.27■□□□□ 0.19
PKM-222ENST00000568883 PANK1Q8TE04 598 aa16.26■□□□□ 0.19
PKM-222ENST00000568883 IL16Q14005 1332 aa16.25■□□□□ 0.19
PKM-222ENST00000568883 AGLP35573 1532 aa16.25■□□□□ 0.19
PKM-222ENST00000568883 IGHDP01880 384 aa16.24■□□□□ 0.19
PKM-222ENST00000568883 NEFMP07197 916 aa16.24■□□□□ 0.19
PKM-222ENST00000568883 MINK1Q8N4C8 1332 aaPredicted RBP16.23■□□□□ 0.19
PKM-222ENST00000568883 RWDD1Q9H446 243 aaPredicted RBP16.23■□□□□ 0.19
PKM-222ENST00000568883 DLC1Q96QB1 1528 aa16.23■□□□□ 0.19
PKM-222ENST00000568883 ALKQ9UM73 1620 aa16.23■□□□□ 0.19
PKM-222ENST00000568883 U2SURPO15042 1029 aaKnown RBP16.22■□□□□ 0.19
PKM-222ENST00000568883 ZKSCAN2Q63HK3 967 aa16.22■□□□□ 0.19
PKM-222ENST00000568883 GGNBP2Q9H3C7 697 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms