RNA–Protein interactions for RNA: ENST00000568459.5

PKM-220, Transcript of pyruvate kinase M1/2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKM, Length 1,806 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-220ENST00000568459 CCDC144AA2RUR9 1427 aa19.47■□□□□ 0.71
PKM-220ENST00000568459 NRXN3Q9Y4C0 1643 aa19.47■□□□□ 0.71
PKM-220ENST00000568459 USP47Q96K76 1375 aa19.46■□□□□ 0.71
PKM-220ENST00000568459 NCOA3Q9Y6Q9 1424 aa19.45■□□□□ 0.7
PKM-220ENST00000568459 FAM135BQ49AJ0 1406 aa19.43■□□□□ 0.7
PKM-220ENST00000568459 PTPRUQ92729 1446 aa19.43■□□□□ 0.7
PKM-220ENST00000568459 PPLO60437 1756 aa19.42■□□□□ 0.7
PKM-220ENST00000568459 METP08581 1390 aa19.42■□□□□ 0.7
PKM-220ENST00000568459 RGL3Q3MIN7 710 aa19.41■□□□□ 0.7
PKM-220ENST00000568459 SLAIN2Q9P270 581 aa19.41■□□□□ 0.7
PKM-220ENST00000568459 C19orf44Q9H6X5 657 aa19.41■□□□□ 0.7
PKM-220ENST00000568459 B4GALNT3Q6L9W6 998 aa19.4■□□□□ 0.7
PKM-220ENST00000568459 LRPPRCP42704 1394 aaKnown RBP19.39■□□□□ 0.69
PKM-220ENST00000568459 ATF3P18847 181 aa19.39■□□□□ 0.69
PKM-220ENST00000568459 XRN1Q8IZH2 1706 aaKnown RBP19.38■□□□□ 0.69
PKM-220ENST00000568459 ROBO1Q9Y6N7 1651 aa19.38■□□□□ 0.69
PKM-220ENST00000568459 CADPS2Q86UW7 1296 aa19.38■□□□□ 0.69
PKM-220ENST00000568459 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.38■□□□□ 0.69
PKM-220ENST00000568459 BRD4O60885 1362 aaPredicted RBP19.38■□□□□ 0.69
PKM-220ENST00000568459 PNISRQ8TF01 805 aaKnown RBP19.37■□□□□ 0.69
PKM-220ENST00000568459 INSRP06213 1382 aa19.35■□□□□ 0.69
PKM-220ENST00000568459 RALBP1Q15311 655 aa19.34■□□□□ 0.69
PKM-220ENST00000568459 SETD1AO15047 1707 aaKnown RBP19.33■□□□□ 0.68
PKM-220ENST00000568459 ADGRF5Q8IZF2 1346 aa19.33■□□□□ 0.68
PKM-220ENST00000568459 NOP58Q9Y2X3 529 aaKnown RBP19.32■□□□□ 0.68
PKM-220ENST00000568459 IFT172Q9UG01 1749 aa19.32■□□□□ 0.68
PKM-220ENST00000568459 MED1Q15648 1581 aaPredicted RBP19.31■□□□□ 0.68
PKM-220ENST00000568459 DCCP43146 1447 aa19.3■□□□□ 0.68
PKM-220ENST00000568459 CCDC136Q96JN2 1154 aa19.3■□□□□ 0.68
PKM-220ENST00000568459 MYBBP1AQ9BQG0 1328 aaKnown RBP19.29■□□□□ 0.68
PKM-220ENST00000568459 PHLPP1O60346 1717 aa19.29■□□□□ 0.68
PKM-220ENST00000568459 PDE3BQ13370 1112 aa19.28■□□□□ 0.68
PKM-220ENST00000568459 ILDR2Q71H61 639 aa19.28■□□□□ 0.68
PKM-220ENST00000568459 TMC1Q8TDI8 760 aa19.28■□□□□ 0.68
PKM-220ENST00000568459 PHF23Q9BUL5 403 aaPredicted RBP19.27■□□□□ 0.68
PKM-220ENST00000568459 PTCH1Q13635 1447 aa19.27■□□□□ 0.67
PKM-220ENST00000568459 ADGRL3Q9HAR2 1447 aa19.27■□□□□ 0.67
PKM-220ENST00000568459 LAMC1P11047 1609 aa19.26■□□□□ 0.67
PKM-220ENST00000568459 ROBO2Q9HCK4 1378 aa19.25■□□□□ 0.67
PKM-220ENST00000568459 ANP32AP39687 249 aaKnown RBP19.25■□□□□ 0.67
PKM-220ENST00000568459 NALCNQ8IZF0 1738 aa19.25■□□□□ 0.67
PKM-220ENST00000568459 IPO9Q96P70 1041 aaKnown RBP19.24■□□□□ 0.67
PKM-220ENST00000568459 CARD11Q9BXL7 1154 aa19.24■□□□□ 0.67
PKM-220ENST00000568459 PIK3C2GO75747 1445 aa19.23■□□□□ 0.67
PKM-220ENST00000568459 BRINP3Q76B58 766 aa19.23■□□□□ 0.67
PKM-220ENST00000568459 STK26Q9P289 416 aa19.23■□□□□ 0.67
PKM-220ENST00000568459 PRAG1Q86YV5 1406 aa19.23■□□□□ 0.67
PKM-220ENST00000568459 TMEM132EQ6IEE7 984 aa19.22■□□□□ 0.67
PKM-220ENST00000568459 MST1RQ04912 1400 aa19.22■□□□□ 0.67
PKM-220ENST00000568459 PARD3Q8TEW0 1356 aa19.21■□□□□ 0.67
PKM-220ENST00000568459 C14orf93Q9H972 538 aaKnown RBP19.21■□□□□ 0.67
PKM-220ENST00000568459 TRPM1Q7Z4N2 1603 aa19.2■□□□□ 0.66
PKM-220ENST00000568459 GPRASP1Q5JY77 1395 aa19.2■□□□□ 0.66
PKM-220ENST00000568459 JCADQ9P266 1359 aa19.2■□□□□ 0.66
PKM-220ENST00000568459 MYOM2P54296 1465 aa19.2■□□□□ 0.66
PKM-220ENST00000568459 AHDC1Q5TGY3 1603 aaPredicted RBP19.19■□□□□ 0.66
PKM-220ENST00000568459 COL16A1Q07092 1604 aaPredicted RBP19.19■□□□□ 0.66
PKM-220ENST00000568459 NLRP13Q86W25 1043 aa19.18■□□□□ 0.66
PKM-220ENST00000568459 ABCC11Q96J66 1382 aa19.18■□□□□ 0.66
PKM-220ENST00000568459 TCERG1O14776 1098 aaKnown RBP19.18■□□□□ 0.66
PKM-220ENST00000568459 CFAP70Q5T0N1 1121 aa19.18■□□□□ 0.66
PKM-220ENST00000568459 NRXN1Q9ULB1 1477 aa19.17■□□□□ 0.66
PKM-220ENST00000568459 RRP1P56182 461 aaKnown RBP19.17■□□□□ 0.66
PKM-220ENST00000568459 KDM2AQ9Y2K7 1162 aa19.17■□□□□ 0.66
PKM-220ENST00000568459 ASXL1Q8IXJ9 1541 aa19.17■□□□□ 0.66
PKM-220ENST00000568459 MS4A1P11836 297 aa19.16■□□□□ 0.66
PKM-220ENST00000568459 WAPLQ7Z5K2 1190 aa19.16■□□□□ 0.66
PKM-220ENST00000568459 DCAF11Q8TEB1 546 aa19.16■□□□□ 0.66
PKM-220ENST00000568459 STAC3Q96MF2 364 aa19.16■□□□□ 0.66
PKM-220ENST00000568459 TECPR2O15040 1411 aa19.16■□□□□ 0.66
PKM-220ENST00000568459 YTHDC2Q9H6S0 1430 aaKnown RBP19.16■□□□□ 0.66
PKM-220ENST00000568459 DEKP35659 375 aaKnown RBP19.16■□□□□ 0.66
PKM-220ENST00000568459 KNDC1Q76NI1 1749 aa19.15■□□□□ 0.66
PKM-220ENST00000568459 ST20-MTHFSA0A0A6YYL1 179 aa19.15■□□□□ 0.66
PKM-220ENST00000568459 C1orf167Q5SNV9 1468 aa19.14■□□□□ 0.66
PKM-220ENST00000568459 SOCS7O14512 581 aa19.14■□□□□ 0.65
PKM-220ENST00000568459 SIRT1Q96EB6 747 aa19.14■□□□□ 0.65
PKM-220ENST00000568459 ZBTB47Q9UFB7 747 aaPredicted RBP19.13■□□□□ 0.65
PKM-220ENST00000568459 NHSL1Q5SYE7 1610 aa19.13■□□□□ 0.65
PKM-220ENST00000568459 SPATA31A6Q5VVP1 1343 aa19.12■□□□□ 0.65
PKM-220ENST00000568459 LRRC59Q96AG4 307 aaKnown RBP19.11■□□□□ 0.65
PKM-220ENST00000568459 BLMP54132 1417 aaPredicted RBP19.11■□□□□ 0.65
PKM-220ENST00000568459 ORAI2Q96SN7 254 aa19.11■□□□□ 0.65
PKM-220ENST00000568459 RCAN3Q9UKA8 241 aa19.11■□□□□ 0.65
PKM-220ENST00000568459 SHPRHQ149N8 1683 aa19.11■□□□□ 0.65
PKM-220ENST00000568459 PAK3O75914 559 aaPredicted RBP19.1■□□□□ 0.65
PKM-220ENST00000568459 DDX17Q92841 729 aaKnown RBP19.1■□□□□ 0.65
PKM-220ENST00000568459 POLR3GLQ9BT43 218 aa19.1■□□□□ 0.65
PKM-220ENST00000568459 CDC42BPGQ6DT37 1551 aa19.1■□□□□ 0.65
PKM-220ENST00000568459 PER1O15534 1290 aaPredicted RBP19.09■□□□□ 0.65
PKM-220ENST00000568459 PLEKHH1Q9ULM0 1364 aa19.09■□□□□ 0.65
PKM-220ENST00000568459 RGS17Q9UGC6 210 aaPredicted RBP19.09■□□□□ 0.65
PKM-220ENST00000568459 ESCO1Q5FWF5 840 aa19.08■□□□□ 0.64
PKM-220ENST00000568459 MEX3CQ5U5Q3 659 aaKnown RBP19.07■□□□□ 0.64
PKM-220ENST00000568459 POGKQ9P215 609 aa19.07■□□□□ 0.64
PKM-220ENST00000568459 NUTM2FA1L443 756 aa19.06■□□□□ 0.64
PKM-220ENST00000568459 PRAM1Q96QH2 718 aa19.06■□□□□ 0.64
PKM-220ENST00000568459 USP35Q9P2H5 1018 aa19.06■□□□□ 0.64
PKM-220ENST00000568459 NUTM2BA6NNL0 878 aaPredicted RBP19.05■□□□□ 0.64
PKM-220ENST00000568459 NUTM2EB1AL46 878 aaPredicted RBP19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms