RNA–Protein interactions for RNA: ENST00000568265.1

TAF1C-219, Transcript of TATA-box binding protein associated factor, RNA polymerase I subunit C, human

APPRIS ALT2 TSL 4

Gene TAF1C, Length 1,140 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TAF1C-219	ENST00000568265	KIAA1210	Q9ULL0	1709 aa		28.91	■■■□□ 2.22
TAF1C-219	ENST00000568265	PLEKHH1	Q9ULM0	1364 aa		28.9	■■■□□ 2.22
TAF1C-219	ENST00000568265	SIRT1	Q96EB6	747 aa		28.9	■■■□□ 2.22
TAF1C-219	ENST00000568265	STK26	Q9P289	416 aa		28.9	■■■□□ 2.22
TAF1C-219	ENST00000568265	DCAF11	Q8TEB1	546 aa		28.89	■■■□□ 2.22
TAF1C-219	ENST00000568265	ADGRB2	O60241	1585 aa		28.87	■■■□□ 2.21
TAF1C-219	ENST00000568265	WAPL	Q7Z5K2	1190 aa		28.85	■■■□□ 2.21
TAF1C-219	ENST00000568265	ARHGEF28	Q8N1W1	1705 aa	Known RBP	28.83	■■■□□ 2.21
TAF1C-219	ENST00000568265	KDM2A	Q9Y2K7	1162 aa		28.82	■■■□□ 2.2
TAF1C-219	ENST00000568265	TRIM26	Q12899	539 aa	Predicted RBP	28.8	■■■□□ 2.2
TAF1C-219	ENST00000568265	KIF1A	Q12756	1690 aa		28.79	■■■□□ 2.2
TAF1C-219	ENST00000568265	LRP6	O75581	1613 aa		28.78	■■■□□ 2.2
TAF1C-219	ENST00000568265	SPATA31A6	Q5VVP1	1343 aa		28.77	■■■□□ 2.2
TAF1C-219	ENST00000568265	PRAM1	Q96QH2	718 aa		28.75	■■■□□ 2.19
TAF1C-219	ENST00000568265	ORAI2	Q96SN7	254 aa		28.75	■■■□□ 2.19
TAF1C-219	ENST00000568265	PHF23	Q9BUL5	403 aa	Predicted RBP	28.75	■■■□□ 2.19
TAF1C-219	ENST00000568265	RGPD8	O14715	1765 aa	Predicted RBP	28.73	■■■□□ 2.19
TAF1C-219	ENST00000568265	USP32	Q8NFA0	1604 aa		28.72	■■■□□ 2.19
TAF1C-219	ENST00000568265	SOS2	Q07890	1332 aa	Predicted RBP	28.72	■■■□□ 2.19
TAF1C-219	ENST00000568265	PXDN	Q92626	1479 aa		28.72	■■■□□ 2.19
TAF1C-219	ENST00000568265	DDX17	Q92841	729 aa	Known RBP	28.71	■■■□□ 2.19
TAF1C-219	ENST00000568265	COL22A1	Q8NFW1	1626 aa	Predicted RBP	28.7	■■■□□ 2.19
TAF1C-219	ENST00000568265	PNPLA6	Q8IY17	1366 aa		28.7	■■■□□ 2.18
TAF1C-219	ENST00000568265	LRRC59	Q96AG4	307 aa	Known RBP	28.69	■■■□□ 2.18
TAF1C-219	ENST00000568265	TRAK1	Q9UPV9	953 aa		28.68	■■■□□ 2.18
TAF1C-219	ENST00000568265	ANKAR	Q7Z5J8	1434 aa		28.68	■■■□□ 2.18
TAF1C-219	ENST00000568265	RGS17	Q9UGC6	210 aa	Predicted RBP	28.67	■■■□□ 2.18
TAF1C-219	ENST00000568265	TRPM1	Q7Z4N2	1603 aa		28.67	■■■□□ 2.18
TAF1C-219	ENST00000568265	SIN3A	Q96ST3	1273 aa		28.66	■■■□□ 2.18
TAF1C-219	ENST00000568265	POGK	Q9P215	609 aa		28.66	■■■□□ 2.18
TAF1C-219	ENST00000568265	NPHP3	Q7Z494	1330 aa		28.66	■■■□□ 2.18
TAF1C-219	ENST00000568265	ESCO1	Q5FWF5	840 aa		28.65	■■■□□ 2.18
TAF1C-219	ENST00000568265	TULP4	Q9NRJ4	1543 aa		28.64	■■■□□ 2.18
TAF1C-219	ENST00000568265	SAFB2	Q14151	953 aa	Known RBP eCLIP	28.64	■■■□□ 2.18
TAF1C-219	ENST00000568265	L3MBTL2	Q969R5	705 aa		28.64	■■■□□ 2.18
TAF1C-219	ENST00000568265	EIF3A	Q14152	1382 aa	Known RBP	28.61	■■■□□ 2.17
TAF1C-219	ENST00000568265	NUTM2F	A1L443	756 aa		28.6	■■■□□ 2.17
TAF1C-219	ENST00000568265	ITSN1	Q15811	1721 aa		28.59	■■■□□ 2.17
TAF1C-219	ENST00000568265	NBPF1	Q3BBV0	1214 aa		28.56	■■■□□ 2.16
TAF1C-219	ENST00000568265	MINK1	Q8N4C8	1332 aa	Predicted RBP	28.56	■■■□□ 2.16
TAF1C-219	ENST00000568265	TOPAZ1	Q8N9V7	1692 aa		28.55	■■■□□ 2.16
TAF1C-219	ENST00000568265	ATP7B	P35670	1465 aa		28.55	■■■□□ 2.16
TAF1C-219	ENST00000568265	FOXO3	O43524	673 aa		28.55	■■■□□ 2.16
TAF1C-219	ENST00000568265	NEUROD1	Q13562	356 aa		28.54	■■■□□ 2.16
TAF1C-219	ENST00000568265	QRICH2	Q9H0J4	1663 aa		28.54	■■■□□ 2.16
TAF1C-219	ENST00000568265	HIRIP3	Q9BW71	556 aa	Predicted RBP	28.53	■■■□□ 2.16
TAF1C-219	ENST00000568265	PHF8	Q9UPP1	1060 aa		28.53	■■■□□ 2.16
TAF1C-219	ENST00000568265	TRPM3	Q9HCF6	1732 aa	Predicted RBP	28.52	■■■□□ 2.16
TAF1C-219	ENST00000568265	MARF1	Q9Y4F3	1742 aa	Known RBP	28.52	■■■□□ 2.16
TAF1C-219	ENST00000568265	WASL	O00401	505 aa	Predicted RBP	28.52	■■■□□ 2.16
TAF1C-219	ENST00000568265	PRR36	Q9H6K5	1346 aa		28.51	■■■□□ 2.15
TAF1C-219	ENST00000568265	MEX3C	Q5U5Q3	659 aa	Known RBP	28.51	■■■□□ 2.15
TAF1C-219	ENST00000568265	NUTM2B	A6NNL0	878 aa	Predicted RBP	28.49	■■■□□ 2.15
TAF1C-219	ENST00000568265	NUTM2E	B1AL46	878 aa	Predicted RBP	28.49	■■■□□ 2.15
TAF1C-219	ENST00000568265	POTEA	Q6S8J7	498 aa		28.49	■■■□□ 2.15
TAF1C-219	ENST00000568265	NUTM2A	Q8IVF1	878 aa	Predicted RBP	28.49	■■■□□ 2.15
TAF1C-219	ENST00000568265	TNS3	Q68CZ2	1445 aa		28.49	■■■□□ 2.15
TAF1C-219	ENST00000568265	XPC	Q01831	940 aa	Predicted RBP	28.48	■■■□□ 2.15
TAF1C-219	ENST00000568265	ABCA3	Q99758	1704 aa		28.48	■■■□□ 2.15
TAF1C-219	ENST00000568265	GPRASP1	Q5JY77	1395 aa		28.48	■■■□□ 2.15
TAF1C-219	ENST00000568265	SPATA31A3	Q5VYP0	1347 aa		28.46	■■■□□ 2.15
TAF1C-219	ENST00000568265	SBNO1	A3KN83	1393 aa		28.46	■■■□□ 2.15
TAF1C-219	ENST00000568265	ALS2	Q96Q42	1657 aa		28.45	■■■□□ 2.15
TAF1C-219	ENST00000568265	ROCK2	O75116	1388 aa	Known RBP	28.44	■■■□□ 2.14
TAF1C-219	ENST00000568265	TONSL	Q96HA7	1378 aa		28.44	■■■□□ 2.14
TAF1C-219	ENST00000568265	CENPJ	Q9HC77	1338 aa	Predicted RBP	28.43	■■■□□ 2.14
TAF1C-219	ENST00000568265	RALGAPB	Q86X10	1494 aa		28.43	■■■□□ 2.14
TAF1C-219	ENST00000568265	ZNF772	Q68DY9	489 aa	Predicted RBP	28.43	■■■□□ 2.14
TAF1C-219	ENST00000568265	KRT28	Q7Z3Y7	464 aa		28.42	■■■□□ 2.14
TAF1C-219	ENST00000568265	AFF2	P51816	1311 aa		28.41	■■■□□ 2.14
TAF1C-219	ENST00000568265	NBPF8	Q3BBV2	869 aa		28.4	■■■□□ 2.14
TAF1C-219	ENST00000568265	PMFBP1	Q8TBY8	1022 aa		28.39	■■■□□ 2.14
TAF1C-219	ENST00000568265	PSME1	Q06323	249 aa		28.38	■■■□□ 2.13
TAF1C-219	ENST00000568265	CRYBG1	Q9Y4K1	1723 aa		28.38	■■■□□ 2.13
TAF1C-219	ENST00000568265	ARHGEF10	O15013	1369 aa		28.37	■■■□□ 2.13
TAF1C-219	ENST00000568265	CDK19	Q9BWU1	502 aa		28.37	■■■□□ 2.13
TAF1C-219	ENST00000568265	NUDT16	Q96DE0	195 aa	Known RBP	28.36	■■■□□ 2.13
TAF1C-219	ENST00000568265	C8orf37	Q96NL8	207 aa		28.36	■■■□□ 2.13
TAF1C-219	ENST00000568265	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	28.35	■■■□□ 2.13
TAF1C-219	ENST00000568265	ADAMTS2	O95450	1211 aa		28.35	■■■□□ 2.13
TAF1C-219	ENST00000568265	POLR3A	O14802	1390 aa	Predicted RBP	28.34	■■■□□ 2.13
TAF1C-219	ENST00000568265	CDK12	Q9NYV4	1490 aa	Predicted RBP	28.34	■■■□□ 2.13
TAF1C-219	ENST00000568265	SBNO2	Q9Y2G9	1366 aa		28.3	■■■□□ 2.12
TAF1C-219	ENST00000568265	FNBP4	Q8N3X1	1017 aa	Predicted RBP	28.3	■■■□□ 2.12
TAF1C-219	ENST00000568265	CCDC61	Q9Y6R9	512 aa		28.3	■■■□□ 2.12
TAF1C-219	ENST00000568265	PLCH1	Q4KWH8	1693 aa		28.29	■■■□□ 2.12
TAF1C-219	ENST00000568265	NGLY1	Q96IV0	654 aa		28.28	■■■□□ 2.12
TAF1C-219	ENST00000568265	NWD2	Q9ULI1	1742 aa		28.27	■■■□□ 2.12
TAF1C-219	ENST00000568265	PLEKHG3	A1L390	1219 aa		28.27	■■■□□ 2.12
TAF1C-219	ENST00000568265	NGDN	Q8NEJ9	315 aa	Known RBP	28.27	■■■□□ 2.12
TAF1C-219	ENST00000568265	SLIT2	O94813	1529 aa		28.27	■■■□□ 2.12
TAF1C-219	ENST00000568265	PPIP5K1	Q6PFW1	1433 aa		28.26	■■■□□ 2.12
TAF1C-219	ENST00000568265	CLSPN	Q9HAW4	1339 aa		28.26	■■■□□ 2.11
TAF1C-219	ENST00000568265	BCL9L	Q86UU0	1499 aa		28.26	■■■□□ 2.11
TAF1C-219	ENST00000568265	ATRN	O75882	1429 aa		28.26	■■■□□ 2.11
TAF1C-219	ENST00000568265	PHRF1	Q9P1Y6	1649 aa	Known RBP	28.25	■■■□□ 2.11
TAF1C-219	ENST00000568265	SRPK2	P78362	688 aa	Known RBP	28.23	■■■□□ 2.11
TAF1C-219	ENST00000568265	ACE	P12821	1306 aa		28.22	■■■□□ 2.11
TAF1C-219	ENST00000568265	RXRB	P28702	533 aa		28.22	■■■□□ 2.11
TAF1C-219	ENST00000568265	CARD11	Q9BXL7	1154 aa		28.22	■■■□□ 2.11

Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms