RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 WAPLQ7Z5K2 1190 aa11.93□□□□□ -0.5
HDGFL3-205ENST00000568129 DISP3Q9P2K9 1392 aa11.92□□□□□ -0.5
HDGFL3-205ENST00000568129 PLEKHH1Q9ULM0 1364 aa11.92□□□□□ -0.5
HDGFL3-205ENST00000568129 RGPD8O14715 1765 aaPredicted RBP11.92□□□□□ -0.5
HDGFL3-205ENST00000568129 STK26Q9P289 416 aa11.92□□□□□ -0.5
HDGFL3-205ENST00000568129 KDM2AQ9Y2K7 1162 aa11.92□□□□□ -0.5
HDGFL3-205ENST00000568129 JCADQ9P266 1359 aa11.92□□□□□ -0.5
HDGFL3-205ENST00000568129 ARHGEF28Q8N1W1 1705 aaKnown RBP11.91□□□□□ -0.5
HDGFL3-205ENST00000568129 ADGRB2O60241 1585 aa11.91□□□□□ -0.5
HDGFL3-205ENST00000568129 SOS2Q07890 1332 aaPredicted RBP11.89□□□□□ -0.51
HDGFL3-205ENST00000568129 L3MBTL2Q969R5 705 aa11.88□□□□□ -0.51
HDGFL3-205ENST00000568129 ORAI2Q96SN7 254 aa11.88□□□□□ -0.51
HDGFL3-205ENST00000568129 SIN3AQ96ST3 1273 aa11.88□□□□□ -0.51
HDGFL3-205ENST00000568129 SPATA31A6Q5VVP1 1343 aa11.87□□□□□ -0.51
HDGFL3-205ENST00000568129 ILDR2Q71H61 639 aa11.87□□□□□ -0.51
HDGFL3-205ENST00000568129 LRRC59Q96AG4 307 aaKnown RBP11.87□□□□□ -0.51
HDGFL3-205ENST00000568129 PRAM1Q96QH2 718 aa11.87□□□□□ -0.51
HDGFL3-205ENST00000568129 RGS17Q9UGC6 210 aaPredicted RBP11.87□□□□□ -0.51
HDGFL3-205ENST00000568129 KIF1AQ12756 1690 aa11.87□□□□□ -0.51
HDGFL3-205ENST00000568129 TRPM1Q7Z4N2 1603 aa11.86□□□□□ -0.51
HDGFL3-205ENST00000568129 USP32Q8NFA0 1604 aa11.86□□□□□ -0.51
HDGFL3-205ENST00000568129 PXDNQ92626 1479 aa11.85□□□□□ -0.51
HDGFL3-205ENST00000568129 NBPF1Q3BBV0 1214 aa11.85□□□□□ -0.51
HDGFL3-205ENST00000568129 TRAK1Q9UPV9 953 aa11.85□□□□□ -0.51
HDGFL3-205ENST00000568129 COL22A1Q8NFW1 1626 aaPredicted RBP11.85□□□□□ -0.51
HDGFL3-205ENST00000568129 ANKARQ7Z5J8 1434 aa11.85□□□□□ -0.51
HDGFL3-205ENST00000568129 LRP6O75581 1613 aa11.83□□□□□ -0.52
HDGFL3-205ENST00000568129 PNPLA6Q8IY17 1366 aa11.83□□□□□ -0.52
HDGFL3-205ENST00000568129 DDX17Q92841 729 aaKnown RBP11.83□□□□□ -0.52
HDGFL3-205ENST00000568129 POGKQ9P215 609 aa11.83□□□□□ -0.52
HDGFL3-205ENST00000568129 NPHP3Q7Z494 1330 aa11.83□□□□□ -0.52
HDGFL3-205ENST00000568129 ESCO1Q5FWF5 840 aa11.82□□□□□ -0.52
HDGFL3-205ENST00000568129 TULP4Q9NRJ4 1543 aa11.81□□□□□ -0.52
HDGFL3-205ENST00000568129 WASLO00401 505 aaPredicted RBP11.81□□□□□ -0.52
HDGFL3-205ENST00000568129 GPRASP1Q5JY77 1395 aa11.8□□□□□ -0.52
HDGFL3-205ENST00000568129 ITSN1Q15811 1721 aa11.8□□□□□ -0.52
HDGFL3-205ENST00000568129 MARF1Q9Y4F3 1742 aaKnown RBP11.8□□□□□ -0.52
HDGFL3-205ENST00000568129 NEUROD1Q13562 356 aa11.8□□□□□ -0.52
HDGFL3-205ENST00000568129 EIF3AQ14152 1382 aaKnown RBP11.79□□□□□ -0.52
HDGFL3-205ENST00000568129 FOXO3O43524 673 aa11.79□□□□□ -0.52
HDGFL3-205ENST00000568129 SAFB2Q14151 953 aaKnown RBP eCLIP11.79□□□□□ -0.52
HDGFL3-205ENST00000568129 NBPF8Q3BBV2 869 aa11.79□□□□□ -0.52
HDGFL3-205ENST00000568129 PHF8Q9UPP1 1060 aa11.79□□□□□ -0.52
HDGFL3-205ENST00000568129 TRPM3Q9HCF6 1732 aaPredicted RBP11.79□□□□□ -0.52
HDGFL3-205ENST00000568129 PRR36Q9H6K5 1346 aa11.79□□□□□ -0.52
HDGFL3-205ENST00000568129 TOPAZ1Q8N9V7 1692 aa11.78□□□□□ -0.52
HDGFL3-205ENST00000568129 NUTM2FA1L443 756 aa11.78□□□□□ -0.52
HDGFL3-205ENST00000568129 SPATA31A3Q5VYP0 1347 aa11.78□□□□□ -0.52
HDGFL3-205ENST00000568129 MINK1Q8N4C8 1332 aaPredicted RBP11.78□□□□□ -0.52
HDGFL3-205ENST00000568129 SBNO1A3KN83 1393 aa11.78□□□□□ -0.52
HDGFL3-205ENST00000568129 QRICH2Q9H0J4 1663 aa11.78□□□□□ -0.52
HDGFL3-205ENST00000568129 PHF23Q9BUL5 403 aaPredicted RBP11.77□□□□□ -0.53
HDGFL3-205ENST00000568129 CLSPNQ9HAW4 1339 aa11.77□□□□□ -0.53
HDGFL3-205ENST00000568129 ATP7BP35670 1465 aa11.76□□□□□ -0.53
HDGFL3-205ENST00000568129 ALS2Q96Q42 1657 aa11.76□□□□□ -0.53
HDGFL3-205ENST00000568129 SOCS7O14512 581 aa11.76□□□□□ -0.53
HDGFL3-205ENST00000568129 POTEAQ6S8J7 498 aa11.76□□□□□ -0.53
HDGFL3-205ENST00000568129 KRT28Q7Z3Y7 464 aa11.76□□□□□ -0.53
HDGFL3-205ENST00000568129 HIRIP3Q9BW71 556 aaPredicted RBP11.76□□□□□ -0.53
HDGFL3-205ENST00000568129 PSME1Q06323 249 aa11.75□□□□□ -0.53
HDGFL3-205ENST00000568129 CDK19Q9BWU1 502 aa11.75□□□□□ -0.53
HDGFL3-205ENST00000568129 CENPJQ9HC77 1338 aaPredicted RBP11.75□□□□□ -0.53
HDGFL3-205ENST00000568129 RALGAPBQ86X10 1494 aa11.75□□□□□ -0.53
HDGFL3-205ENST00000568129 PLEKHG3A1L390 1219 aa11.74□□□□□ -0.53
HDGFL3-205ENST00000568129 NUDT16Q96DE0 195 aaKnown RBP11.74□□□□□ -0.53
HDGFL3-205ENST00000568129 TIMELESSQ9UNS1 1208 aa11.74□□□□□ -0.53
HDGFL3-205ENST00000568129 POLR3AO14802 1390 aaPredicted RBP11.74□□□□□ -0.53
HDGFL3-205ENST00000568129 ROCK2O75116 1388 aaKnown RBP11.73□□□□□ -0.53
HDGFL3-205ENST00000568129 TNS3Q68CZ2 1445 aa11.73□□□□□ -0.53
HDGFL3-205ENST00000568129 ZNF772Q68DY9 489 aaPredicted RBP11.73□□□□□ -0.53
HDGFL3-205ENST00000568129 FNBP4Q8N3X1 1017 aaPredicted RBP11.73□□□□□ -0.53
HDGFL3-205ENST00000568129 TONSLQ96HA7 1378 aa11.73□□□□□ -0.53
HDGFL3-205ENST00000568129 ABCA3Q99758 1704 aa11.73□□□□□ -0.53
HDGFL3-205ENST00000568129 SBNO2Q9Y2G9 1366 aa11.73□□□□□ -0.53
HDGFL3-205ENST00000568129 CCDC61Q9Y6R9 512 aa11.73□□□□□ -0.53
HDGFL3-205ENST00000568129 CRYBG1Q9Y4K1 1723 aa11.72□□□□□ -0.53
HDGFL3-205ENST00000568129 XPCQ01831 940 aaPredicted RBP11.72□□□□□ -0.53
HDGFL3-205ENST00000568129 PMFBP1Q8TBY8 1022 aa11.72□□□□□ -0.53
HDGFL3-205ENST00000568129 NUTM2BA6NNL0 878 aaPredicted RBP11.71□□□□□ -0.53
HDGFL3-205ENST00000568129 NUTM2EB1AL46 878 aaPredicted RBP11.71□□□□□ -0.53
HDGFL3-205ENST00000568129 NUTM2AQ8IVF1 878 aaPredicted RBP11.71□□□□□ -0.53
HDGFL3-205ENST00000568129 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.71□□□□□ -0.54
HDGFL3-205ENST00000568129 ARHGEF10O15013 1369 aa11.7□□□□□ -0.54
HDGFL3-205ENST00000568129 MEX3CQ5U5Q3 659 aaKnown RBP11.7□□□□□ -0.54
HDGFL3-205ENST00000568129 PCGF6Q9BYE7 350 aa11.7□□□□□ -0.54
HDGFL3-205ENST00000568129 BRD4O60885 1362 aaPredicted RBP11.69□□□□□ -0.54
HDGFL3-205ENST00000568129 AFF2P51816 1311 aa11.69□□□□□ -0.54
HDGFL3-205ENST00000568129 CDK12Q9NYV4 1490 aaPredicted RBP11.69□□□□□ -0.54
HDGFL3-205ENST00000568129 NWD2Q9ULI1 1742 aa11.69□□□□□ -0.54
HDGFL3-205ENST00000568129 PUS7Q96PZ0 661 aaKnown RBP11.68□□□□□ -0.54
HDGFL3-205ENST00000568129 AKAP12Q02952 1782 aa11.68□□□□□ -0.54
HDGFL3-205ENST00000568129 BCL9LQ86UU0 1499 aa11.68□□□□□ -0.54
HDGFL3-205ENST00000568129 ACEP12821 1306 aa11.67□□□□□ -0.54
HDGFL3-205ENST00000568129 EVC2Q86UK5 1308 aa11.67□□□□□ -0.54
HDGFL3-205ENST00000568129 SLIT2O94813 1529 aa11.67□□□□□ -0.54
HDGFL3-205ENST00000568129 NGDNQ8NEJ9 315 aaKnown RBP11.67□□□□□ -0.54
HDGFL3-205ENST00000568129 C8orf37Q96NL8 207 aa11.67□□□□□ -0.54
HDGFL3-205ENST00000568129 CARD11Q9BXL7 1154 aa11.67□□□□□ -0.54
HDGFL3-205ENST00000568129 ADAMTS2O95450 1211 aa11.66□□□□□ -0.54
HDGFL3-205ENST00000568129 NGLY1Q96IV0 654 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms