RNA–Protein interactions for RNA: ENST00000567114.5

RPUSD1-208, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2 BASIC

Gene RPUSD1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-208ENST00000567114 XRN1Q8IZH2 1706 aaKnown RBP35.6■■■■□ 3.29
RPUSD1-208ENST00000567114 DMRT2Q9Y5R5 561 aa35.59■■■■□ 3.29
RPUSD1-208ENST00000567114 PTCH1Q13635 1447 aa35.59■■■■□ 3.29
RPUSD1-208ENST00000567114 CDCA8Q53HL2 280 aa35.57■■■■□ 3.29
RPUSD1-208ENST00000567114 DDX10Q13206 875 aaKnown RBP35.57■■■■□ 3.28
RPUSD1-208ENST00000567114 EVC2Q86UK5 1308 aa35.55■■■■□ 3.28
RPUSD1-208ENST00000567114 RBM33Q96EV2 1170 aaKnown RBP35.48■■■■□ 3.27
RPUSD1-208ENST00000567114 NWD1Q149M9 1564 aa35.47■■■■□ 3.27
RPUSD1-208ENST00000567114 SRPK2P78362 688 aaKnown RBP35.46■■■■□ 3.27
RPUSD1-208ENST00000567114 CDK19Q9BWU1 502 aa35.46■■■■□ 3.27
RPUSD1-208ENST00000567114 TULP4Q9NRJ4 1543 aa35.46■■■■□ 3.27
RPUSD1-208ENST00000567114 PROSER2Q86WR7 435 aaPredicted RBP35.46■■■■□ 3.27
RPUSD1-208ENST00000567114 CABP2Q9NPB3 220 aa35.46■■■■□ 3.27
RPUSD1-208ENST00000567114 DIEXFQ68CQ4 756 aaKnown RBP35.45■■■■□ 3.27
RPUSD1-208ENST00000567114 SIPA1L2Q9P2F8 1722 aaPredicted RBP35.43■■■■□ 3.26
RPUSD1-208ENST00000567114 WASLO00401 505 aaPredicted RBP35.43■■■■□ 3.26
RPUSD1-208ENST00000567114 ZNF335Q9H4Z2 1342 aaPredicted RBP35.42■■■■□ 3.26
RPUSD1-208ENST00000567114 NKTRP30414 1462 aaKnown RBP35.41■■■■□ 3.26
RPUSD1-208ENST00000567114 PUS7Q96PZ0 661 aaKnown RBP35.4■■■■□ 3.26
RPUSD1-208ENST00000567114 STRCP1A6NGW2 1772 aa35.39■■■■□ 3.26
RPUSD1-208ENST00000567114 C14orf37Q86TY3 774 aa35.39■■■■□ 3.26
RPUSD1-208ENST00000567114 TMC1Q8TDI8 760 aa35.34■■■■□ 3.25
RPUSD1-208ENST00000567114 ADGRB2O60241 1585 aa35.33■■■■□ 3.25
RPUSD1-208ENST00000567114 TMEM94Q12767 1356 aa35.31■■■■□ 3.24
RPUSD1-208ENST00000567114 ATAD2Q6PL18 1390 aa35.31■■■■□ 3.24
RPUSD1-208ENST00000567114 NUTM2FA1L443 756 aa35.29■■■■□ 3.24
RPUSD1-208ENST00000567114 SLC12A5Q9H2X9 1139 aa35.29■■■■□ 3.24
RPUSD1-208ENST00000567114 ADGRL3Q9HAR2 1447 aa35.29■■■■□ 3.24
RPUSD1-208ENST00000567114 NUDT16Q96DE0 195 aaKnown RBP35.27■■■■□ 3.24
RPUSD1-208ENST00000567114 PANK3Q9H999 370 aa35.27■■■■□ 3.24
RPUSD1-208ENST00000567114 NALCNQ8IZF0 1738 aa35.26■■■■□ 3.24
RPUSD1-208ENST00000567114 C19orf44Q9H6X5 657 aa35.24■■■■□ 3.23
RPUSD1-208ENST00000567114 MYOM1P52179 1685 aa35.23■■■■□ 3.23
RPUSD1-208ENST00000567114 CABP1Q9NZU7 370 aa35.22■■■■□ 3.23
RPUSD1-208ENST00000567114 CCDC61Q9Y6R9 512 aa35.22■■■■□ 3.23
RPUSD1-208ENST00000567114 NCOA3Q9Y6Q9 1424 aa35.22■■■■□ 3.23
RPUSD1-208ENST00000567114 PRR36Q9H6K5 1346 aa35.21■■■■□ 3.23
RPUSD1-208ENST00000567114 LRRC7Q96NW7 1537 aa35.2■■■■□ 3.23
RPUSD1-208ENST00000567114 NINLQ9Y2I6 1382 aa35.19■■■■□ 3.22
RPUSD1-208ENST00000567114 CDC42BPGQ6DT37 1551 aa35.18■■■■□ 3.22
RPUSD1-208ENST00000567114 ATP7BP35670 1465 aa35.17■■■■□ 3.22
RPUSD1-208ENST00000567114 PPIP5K1Q6PFW1 1433 aa35.16■■■■□ 3.22
RPUSD1-208ENST00000567114 ATF3P18847 181 aa35.14■■■■□ 3.22
RPUSD1-208ENST00000567114 PER1O15534 1290 aaPredicted RBP35.13■■■■□ 3.21
RPUSD1-208ENST00000567114 TERF2IPQ9NYB0 399 aa35.13■■■■□ 3.21
RPUSD1-208ENST00000567114 MSH6P52701 1360 aa35.12■■■■□ 3.21
RPUSD1-208ENST00000567114 FMN2Q9NZ56 1722 aa35.12■■■■□ 3.21
RPUSD1-208ENST00000567114 ANKARQ7Z5J8 1434 aa35.11■■■■□ 3.21
RPUSD1-208ENST00000567114 CARD14Q9BXL6 1004 aa35.1■■■■□ 3.21
RPUSD1-208ENST00000567114 KNSTRNQ9Y448 316 aa35.1■■■■□ 3.21
RPUSD1-208ENST00000567114 ANKRD36BQ8N2N9 1353 aa35.1■■■■□ 3.21
RPUSD1-208ENST00000567114 XIRP1Q702N8 1843 aaKnown RBP35.1■■■■□ 3.21
RPUSD1-208ENST00000567114 USP32Q8NFA0 1604 aa35.09■■■■□ 3.21
RPUSD1-208ENST00000567114 HDGFL2Q7Z4V5 671 aaPredicted RBP35.09■■■■□ 3.21
RPUSD1-208ENST00000567114 CADPS2Q86UW7 1296 aa35.08■■■■□ 3.21
RPUSD1-208ENST00000567114 RGPD8O14715 1765 aaPredicted RBP35.07■■■■□ 3.2
RPUSD1-208ENST00000567114 A0A1W2PP64 1363 aa35.07■■■■□ 3.2
RPUSD1-208ENST00000567114 CNGB1Q14028 1251 aaPredicted RBP35.06■■■■□ 3.2
RPUSD1-208ENST00000567114 DCCP43146 1447 aa35.06■■■■□ 3.2
RPUSD1-208ENST00000567114 PLEKHG3A1L390 1219 aa35.06■■■■□ 3.2
RPUSD1-208ENST00000567114 ANP32CO43423 234 aa35.05■■■■□ 3.2
RPUSD1-208ENST00000567114 PMFBP1Q8TBY8 1022 aa35.05■■■■□ 3.2
RPUSD1-208ENST00000567114 CD163L1Q9NR16 1453 aa35.04■■■■□ 3.2
RPUSD1-208ENST00000567114 LTBP4Q8N2S1 1624 aa35.04■■■■□ 3.2
RPUSD1-208ENST00000567114 ESCO1Q5FWF5 840 aa35.04■■■■□ 3.2
RPUSD1-208ENST00000567114 TOPAZ1Q8N9V7 1692 aa35.02■■■■□ 3.2
RPUSD1-208ENST00000567114 ACEP12821 1306 aa35.02■■■■□ 3.2
RPUSD1-208ENST00000567114 MIER1Q8N108 512 aa35.01■■■■□ 3.19
RPUSD1-208ENST00000567114 ITSN1Q15811 1721 aa35.01■■■■□ 3.19
RPUSD1-208ENST00000567114 NGDNQ8NEJ9 315 aaKnown RBP35■■■■□ 3.19
RPUSD1-208ENST00000567114 NSD3Q9BZ95 1437 aa35■■■■□ 3.19
RPUSD1-208ENST00000567114 ZNF692Q9BU19 519 aaPredicted RBP34.99■■■■□ 3.19
RPUSD1-208ENST00000567114 CPSF1Q10570 1443 aaKnown RBP34.99■■■■□ 3.19
RPUSD1-208ENST00000567114 KTN1Q86UP2 1357 aaKnown RBP34.98■■■■□ 3.19
RPUSD1-208ENST00000567114 ORAI2Q96SN7 254 aa34.98■■■■□ 3.19
RPUSD1-208ENST00000567114 PHF8Q9UPP1 1060 aa34.98■■■■□ 3.19
RPUSD1-208ENST00000567114 C1orf167Q5SNV9 1468 aa34.97■■■■□ 3.19
RPUSD1-208ENST00000567114 MST1RQ04912 1400 aa34.96■■■■□ 3.19
RPUSD1-208ENST00000567114 CC2D1BQ5T0F9 858 aaKnown RBP34.96■■■■□ 3.19
RPUSD1-208ENST00000567114 AMER1Q5JTC6 1135 aaPredicted RBP34.95■■■■□ 3.19
RPUSD1-208ENST00000567114 PRKRIP1Q9H875 184 aaPredicted RBP34.92■■■■□ 3.18
RPUSD1-208ENST00000567114 POLR3AO14802 1390 aaPredicted RBP34.92■■■■□ 3.18
RPUSD1-208ENST00000567114 CGNL1Q0VF96 1302 aa34.92■■■■□ 3.18
RPUSD1-208ENST00000567114 SLAIN2Q9P270 581 aa34.91■■■■□ 3.18
RPUSD1-208ENST00000567114 SUGP2Q8IX01 1082 aaKnown RBP eCLIP34.9■■■■□ 3.18
RPUSD1-208ENST00000567114 AKAP12Q02952 1782 aa34.87■■■■□ 3.17
RPUSD1-208ENST00000567114 EDC4Q6P2E9 1401 aaKnown RBP34.87■■■■□ 3.17
RPUSD1-208ENST00000567114 FOXO3O43524 673 aa34.85■■■■□ 3.17
RPUSD1-208ENST00000567114 NPC1L1Q9UHC9 1359 aa34.85■■■■□ 3.17
RPUSD1-208ENST00000567114 USP6P35125 1406 aa34.85■■■■□ 3.17
RPUSD1-208ENST00000567114 PSME1Q06323 249 aa34.84■■■■□ 3.17
RPUSD1-208ENST00000567114 MON2Q7Z3U7 1717 aa34.83■■■■□ 3.17
RPUSD1-208ENST00000567114 RALBP1Q15311 655 aa34.83■■■■□ 3.17
RPUSD1-208ENST00000567114 FYB1O15117 783 aa34.82■■■■□ 3.16
RPUSD1-208ENST00000567114 TTC21BQ7Z4L5 1316 aa34.8■■■■□ 3.16
RPUSD1-208ENST00000567114 GGNBP2Q9H3C7 697 aa34.79■■■■□ 3.16
RPUSD1-208ENST00000567114 BRINP3Q76B58 766 aa34.78■■■■□ 3.16
RPUSD1-208ENST00000567114 PARD3Q8TEW0 1356 aa34.78■■■■□ 3.16
RPUSD1-208ENST00000567114 NME9Q86XW9 330 aa34.77■■■■□ 3.16
RPUSD1-208ENST00000567114 NSD2O96028 1365 aa34.77■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms