RNA–Protein interactions for RNA: ENST00000566889.5

FANCA-221, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-221ENST00000566889 MFAP1P55081 439 aaKnown RBP31.53■■■□□ 2.64
FANCA-221ENST00000566889 SNX21Q969T3 373 aa31.52■■■□□ 2.64
FANCA-221ENST00000566889 PREX2Q70Z35 1606 aa31.52■■■□□ 2.64
FANCA-221ENST00000566889 SLC24A1O60721 1099 aa31.52■■■□□ 2.64
FANCA-221ENST00000566889 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.51■■■□□ 2.638e-8■□□□□ 11.2
FANCA-221ENST00000566889 CCDC173Q0VFZ6 552 aa31.5■■■□□ 2.63
FANCA-221ENST00000566889 DUOX2Q9NRD8 1548 aa31.5■■■□□ 2.63
FANCA-221ENST00000566889 WDR63Q8IWG1 891 aa31.49■■■□□ 2.63
FANCA-221ENST00000566889 TERF1P54274 439 aa31.49■■■□□ 2.63
FANCA-221ENST00000566889 SMC5Q8IY18 1101 aa31.48■■■□□ 2.63
FANCA-221ENST00000566889 CDC42BPBQ9Y5S2 1711 aa31.48■■■□□ 2.63
FANCA-221ENST00000566889 TTC37Q6PGP7 1564 aa31.47■■■□□ 2.63
FANCA-221ENST00000566889 KANK1Q14678 1352 aa31.47■■■□□ 2.63
FANCA-221ENST00000566889 MVPQ14764 893 aaKnown RBP31.47■■■□□ 2.63
FANCA-221ENST00000566889 PPP1R9BQ96SB3 815 aa31.47■■■□□ 2.63
FANCA-221ENST00000566889 GAS2L3Q86XJ1 694 aa31.46■■■□□ 2.63
FANCA-221ENST00000566889 TNPO1Q92973 898 aaKnown RBP31.46■■■□□ 2.63
FANCA-221ENST00000566889 PHF23Q9BUL5 403 aaPredicted RBP31.46■■■□□ 2.63
FANCA-221ENST00000566889 KIAA1211Q6ZU35 1233 aa31.45■■■□□ 2.62
FANCA-221ENST00000566889 RBM25P49756 843 aaKnown RBP31.44■■■□□ 2.62
FANCA-221ENST00000566889 SPHKAPQ2M3C7 1700 aa31.44■■■□□ 2.62
FANCA-221ENST00000566889 SHROOM2Q13796 1616 aa31.44■■■□□ 2.62
FANCA-221ENST00000566889 RUNDC1Q96C34 613 aa31.44■■■□□ 2.62
FANCA-221ENST00000566889 CEP152O94986 1710 aa31.44■■■□□ 2.62
FANCA-221ENST00000566889 CALD1Q05682 793 aaKnown RBP31.43■■■□□ 2.62
FANCA-221ENST00000566889 RAB3GAP1Q15042 981 aa31.43■■■□□ 2.62
FANCA-221ENST00000566889 ZSCAN30Q86W11 494 aa31.43■■■□□ 2.62
FANCA-221ENST00000566889 IQSEC2Q5JU85 1478 aa31.42■■■□□ 2.62
FANCA-221ENST00000566889 HDAC1Q13547 482 aaPredicted RBP31.41■■■□□ 2.62
FANCA-221ENST00000566889 TNNQ9UQP3 1299 aa31.41■■■□□ 2.62
FANCA-221ENST00000566889 OFD1O75665 1012 aa31.41■■■□□ 2.62
FANCA-221ENST00000566889 CCDC27Q2M243 656 aa31.4■■■□□ 2.62
FANCA-221ENST00000566889 NCBP3Q53F19 620 aaKnown RBP31.4■■■□□ 2.62
FANCA-221ENST00000566889 PDZRN4Q6ZMN7 1036 aaPredicted RBP31.4■■■□□ 2.62
FANCA-221ENST00000566889 ANP32BQ92688 251 aaKnown RBP31.39■■■□□ 2.62
FANCA-221ENST00000566889 SYCP2Q9BX26 1530 aa31.39■■■□□ 2.62
FANCA-221ENST00000566889 IBTKQ9P2D0 1353 aaPredicted RBP31.39■■■□□ 2.62
FANCA-221ENST00000566889 MAP7D2Q96T17 732 aa31.39■■■□□ 2.61
FANCA-221ENST00000566889 SHPRHQ149N8 1683 aa31.38■■■□□ 2.61
FANCA-221ENST00000566889 ZKSCAN2Q63HK3 967 aa31.37■■■□□ 2.61
FANCA-221ENST00000566889 KIAA1210Q9ULL0 1709 aa31.36■■■□□ 2.61
FANCA-221ENST00000566889 JPH4Q96JJ6 628 aa31.36■■■□□ 2.61
FANCA-221ENST00000566889 DZIP1LQ8IYY4 767 aaKnown RBP31.35■■■□□ 2.61
FANCA-221ENST00000566889 HSP90AB1P08238 724 aaKnown RBP31.34■■■□□ 2.61
FANCA-221ENST00000566889 CT47B1P0C2W7 299 aaPredicted RBP31.34■■■□□ 2.61
FANCA-221ENST00000566889 TCP11L2Q8N4U5 519 aa31.34■■■□□ 2.61
FANCA-221ENST00000566889 NASPP49321 788 aaPredicted RBP31.33■■■□□ 2.61
FANCA-221ENST00000566889 FTSJ3Q8IY81 847 aaKnown RBP31.33■■■□□ 2.61
FANCA-221ENST00000566889 MSNP26038 577 aaKnown RBP31.33■■■□□ 2.61
FANCA-221ENST00000566889 BCL2L13Q9BXK5 485 aa31.32■■■□□ 2.6
FANCA-221ENST00000566889 CARD14Q9BXL6 1004 aa31.32■■■□□ 2.6
FANCA-221ENST00000566889 HS1BP3Q53T59 392 aa31.31■■■□□ 2.6
FANCA-221ENST00000566889 ERVK-7P63135 1459 aa31.31■■■□□ 2.6
FANCA-221ENST00000566889 GOLGA6L22H0YM25 854 aa31.3■■■□□ 2.6
FANCA-221ENST00000566889 NEUROD2Q15784 382 aa31.3■■■□□ 2.6
FANCA-221ENST00000566889 TRPM2O94759 1503 aa31.29■■■□□ 2.6
FANCA-221ENST00000566889 CLEC17AQ6ZS10 378 aa31.29■■■□□ 2.6
FANCA-221ENST00000566889 CHMP7Q8WUX9 453 aaPredicted RBP31.28■■■□□ 2.6
FANCA-221ENST00000566889 DDX19BQ9UMR2 479 aa31.28■■■□□ 2.6
FANCA-221ENST00000566889 RRP7AQ9Y3A4 280 aaKnown RBP31.27■■■□□ 2.6
FANCA-221ENST00000566889 KLHL40Q2TBA0 621 aa31.25■■■□□ 2.59
FANCA-221ENST00000566889 ARHGAP5Q13017 1502 aa31.24■■■□□ 2.59
FANCA-221ENST00000566889 ARHGAP31Q2M1Z3 1444 aa31.23■■■□□ 2.59
FANCA-221ENST00000566889 RIPK4P57078 832 aa31.23■■■□□ 2.59
FANCA-221ENST00000566889 MTERF4Q7Z6M4 381 aaKnown RBP31.2■■■□□ 2.58
FANCA-221ENST00000566889 MORC1Q86VD1 984 aa31.2■■■□□ 2.58
FANCA-221ENST00000566889 K7ELQ4 463 aaPredicted RBP31.19■■■□□ 2.58
FANCA-221ENST00000566889 PTPRTO14522 1441 aa31.19■■■□□ 2.58
FANCA-221ENST00000566889 PRDM4Q9UKN5 801 aa31.18■■■□□ 2.58
FANCA-221ENST00000566889 ADGRL1O94910 1474 aa31.18■■■□□ 2.58
FANCA-221ENST00000566889 ZNF500O60304 480 aaPredicted RBP31.18■■■□□ 2.58
FANCA-221ENST00000566889 ZNF445P59923 1031 aa31.18■■■□□ 2.58
FANCA-221ENST00000566889 NUCB1Q02818 461 aa31.17■■■□□ 2.58
FANCA-221ENST00000566889 SBNO2Q9Y2G9 1366 aa31.16■■■□□ 2.58
FANCA-221ENST00000566889 NEURL4Q96JN8 1562 aa31.16■■■□□ 2.58
FANCA-221ENST00000566889 ERCC6Q03468 1493 aa31.16■■■□□ 2.58
FANCA-221ENST00000566889 KIF16BQ96L93 1317 aa31.16■■■□□ 2.58
FANCA-221ENST00000566889 KIF2CQ99661 725 aa31.16■■■□□ 2.58
FANCA-221ENST00000566889 NOL7Q9UMY1 257 aaKnown RBP31.16■■■□□ 2.58
FANCA-221ENST00000566889 DDX49Q9Y6V7 483 aaKnown RBP31.16■■■□□ 2.58
FANCA-221ENST00000566889 ZNF518AQ6AHZ1 1483 aa31.15■■■□□ 2.58
FANCA-221ENST00000566889 BMP2KLQ5H9B9 411 aa31.15■■■□□ 2.58
FANCA-221ENST00000566889 CLTCL1P53675 1640 aa31.14■■■□□ 2.58
FANCA-221ENST00000566889 TRIM27P14373 513 aa31.14■■■□□ 2.58
FANCA-221ENST00000566889 CFAP53Q96M91 514 aa31.14■■■□□ 2.58
FANCA-221ENST00000566889 SMC4Q9NTJ3 1288 aa31.14■■■□□ 2.58
FANCA-221ENST00000566889 ITPRIPQ8IWB1 547 aa31.13■■■□□ 2.57
FANCA-221ENST00000566889 ATF7IPQ6VMQ6 1270 aa31.13■■■□□ 2.57
FANCA-221ENST00000566889 MYO3AQ8NEV4 1616 aa31.13■■■□□ 2.57
FANCA-221ENST00000566889 ADGRB2O60241 1585 aa31.11■■■□□ 2.57
FANCA-221ENST00000566889 BAG4O95429 457 aaKnown RBP31.11■■■□□ 2.57
FANCA-221ENST00000566889 NSD3Q9BZ95 1437 aa31.11■■■□□ 2.57
FANCA-221ENST00000566889 SSFA2P28290 1259 aa31.1■■■□□ 2.57
FANCA-221ENST00000566889 RBM10P98175 930 aaKnown RBP31.1■■■□□ 2.57
FANCA-221ENST00000566889 R3HCC1Q9Y3T6 440 aaKnown RBP31.1■■■□□ 2.57
FANCA-221ENST00000566889 CSPP1Q1MSJ5 1256 aa31.1■■■□□ 2.57
FANCA-221ENST00000566889 ZBTB40Q9NUA8 1239 aa31.1■■■□□ 2.57
FANCA-221ENST00000566889 CFAP74Q9C0B2 1584 aa31.09■■■□□ 2.57
FANCA-221ENST00000566889 PDLIM2Q96JY6 352 aa31.09■■■□□ 2.57
FANCA-221ENST00000566889 MCM5P33992 734 aa31.09■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms