RNA–Protein interactions for RNA: ENST00000566818.1

IFT140-208, Transcript of intraflagellar transport 140, humanhuman

TSL 3

Gene IFT140, Length 722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-208ENST00000566818 MEX3CQ5U5Q3 659 aaKnown RBP27.46■■□□□ 1.99
IFT140-208ENST00000566818 LRRC59Q96AG4 307 aaKnown RBP27.46■■□□□ 1.99
IFT140-208ENST00000566818 CFAP70Q5T0N1 1121 aa27.45■■□□□ 1.98
IFT140-208ENST00000566818 WAPLQ7Z5K2 1190 aa27.44■■□□□ 1.98
IFT140-208ENST00000566818 SIRT1Q96EB6 747 aa27.42■■□□□ 1.98
IFT140-208ENST00000566818 STAC3Q96MF2 364 aa27.42■■□□□ 1.98
IFT140-208ENST00000566818 ORAI2Q96SN7 254 aa27.42■■□□□ 1.98
IFT140-208ENST00000566818 PLEKHH1Q9ULM0 1364 aa27.42■■□□□ 1.98
IFT140-208ENST00000566818 DDX17Q92841 729 aaKnown RBP27.41■■□□□ 1.98
IFT140-208ENST00000566818 DCAF11Q8TEB1 546 aa27.4■■□□□ 1.98
IFT140-208ENST00000566818 DLC1Q96QB1 1528 aa27.39■■□□□ 1.98
IFT140-208ENST00000566818 FMN2Q9NZ56 1722 aa27.38■■□□□ 1.97
IFT140-208ENST00000566818 PNPLA6Q8IY17 1366 aa27.38■■□□□ 1.97
IFT140-208ENST00000566818 NUTM2BA6NNL0 878 aaPredicted RBP27.37■■□□□ 1.97
IFT140-208ENST00000566818 NUTM2EB1AL46 878 aaPredicted RBP27.37■■□□□ 1.97
IFT140-208ENST00000566818 ADGRB1O14514 1584 aa27.37■■□□□ 1.97
IFT140-208ENST00000566818 ESCO1Q5FWF5 840 aa27.37■■□□□ 1.97
IFT140-208ENST00000566818 POTEAQ6S8J7 498 aa27.37■■□□□ 1.97
IFT140-208ENST00000566818 NUTM2AQ8IVF1 878 aaPredicted RBP27.37■■□□□ 1.97
IFT140-208ENST00000566818 KDM2AQ9Y2K7 1162 aa27.37■■□□□ 1.97
IFT140-208ENST00000566818 SOS2Q07890 1332 aaPredicted RBP27.36■■□□□ 1.97
IFT140-208ENST00000566818 NPHP3Q7Z494 1330 aa27.36■■□□□ 1.97
IFT140-208ENST00000566818 ZNF772Q68DY9 489 aaPredicted RBP27.33■■□□□ 1.97
IFT140-208ENST00000566818 KIF1AQ12756 1690 aa27.33■■□□□ 1.97
IFT140-208ENST00000566818 PRAM1Q96QH2 718 aa27.32■■□□□ 1.96
IFT140-208ENST00000566818 NUTM2FA1L443 756 aa27.31■■□□□ 1.96
IFT140-208ENST00000566818 POGKQ9P215 609 aa27.31■■□□□ 1.96
IFT140-208ENST00000566818 PXDNQ92626 1479 aa27.29■■□□□ 1.96
IFT140-208ENST00000566818 ADGRB2O60241 1585 aa27.28■■□□□ 1.96
IFT140-208ENST00000566818 SAFB2Q14151 953 aaKnown RBP eCLIP27.28■■□□□ 1.96
IFT140-208ENST00000566818 COL22A1Q8NFW1 1626 aaPredicted RBP27.27■■□□□ 1.96
IFT140-208ENST00000566818 TRAK1Q9UPV9 953 aa27.26■■□□□ 1.95
IFT140-208ENST00000566818 FOXO3O43524 673 aa27.24■■□□□ 1.95
IFT140-208ENST00000566818 AFF2P51816 1311 aa27.23■■□□□ 1.95
IFT140-208ENST00000566818 ANKARQ7Z5J8 1434 aa27.23■■□□□ 1.95
IFT140-208ENST00000566818 KIAA1210Q9ULL0 1709 aa27.22■■□□□ 1.95
IFT140-208ENST00000566818 C8orf37Q96NL8 207 aa27.22■■□□□ 1.95
IFT140-208ENST00000566818 EIF3AQ14152 1382 aaKnown RBP27.22■■□□□ 1.95
IFT140-208ENST00000566818 XPCQ01831 940 aaPredicted RBP27.2■■□□□ 1.94
IFT140-208ENST00000566818 ARHGEF28Q8N1W1 1705 aaKnown RBP27.19■■□□□ 1.94
IFT140-208ENST00000566818 RGPD8O14715 1765 aaPredicted RBP27.18■■□□□ 1.94
IFT140-208ENST00000566818 ADAMTS2O95450 1211 aa27.18■■□□□ 1.94
IFT140-208ENST00000566818 PHF8Q9UPP1 1060 aa27.18■■□□□ 1.94
IFT140-208ENST00000566818 USP32Q8NFA0 1604 aa27.16■■□□□ 1.94
IFT140-208ENST00000566818 MINK1Q8N4C8 1332 aaPredicted RBP27.16■■□□□ 1.94
IFT140-208ENST00000566818 TULP4Q9NRJ4 1543 aa27.15■■□□□ 1.94
IFT140-208ENST00000566818 RXRBP28702 533 aa27.14■■□□□ 1.94
IFT140-208ENST00000566818 NGLY1Q96IV0 654 aa27.14■■□□□ 1.94
IFT140-208ENST00000566818 HIRIP3Q9BW71 556 aaPredicted RBP27.14■■□□□ 1.94
IFT140-208ENST00000566818 PSME1Q06323 249 aa27.13■■□□□ 1.93
IFT140-208ENST00000566818 KRT28Q7Z3Y7 464 aa27.13■■□□□ 1.93
IFT140-208ENST00000566818 SPATA31A3Q5VYP0 1347 aa27.12■■□□□ 1.93
IFT140-208ENST00000566818 CDK12Q9NYV4 1490 aaPredicted RBP27.12■■□□□ 1.93
IFT140-208ENST00000566818 TNS3Q68CZ2 1445 aa27.11■■□□□ 1.93
IFT140-208ENST00000566818 WASLO00401 505 aaPredicted RBP27.09■■□□□ 1.93
IFT140-208ENST00000566818 MARF1Q9Y4F3 1742 aaKnown RBP27.09■■□□□ 1.93
IFT140-208ENST00000566818 SBNO1A3KN83 1393 aa27.09■■□□□ 1.93
IFT140-208ENST00000566818 QTRT2Q9H974 415 aaKnown RBP27.06■■□□□ 1.92
IFT140-208ENST00000566818 ITSN1Q15811 1721 aa27.06■■□□□ 1.92
IFT140-208ENST00000566818 ARHGEF10O15013 1369 aa27.06■■□□□ 1.92
IFT140-208ENST00000566818 RBM6P78332 1123 aaKnown RBP27.05■■□□□ 1.92
IFT140-208ENST00000566818 PMFBP1Q8TBY8 1022 aa27.05■■□□□ 1.92
IFT140-208ENST00000566818 USP21Q9UK80 565 aa27.05■■□□□ 1.92
IFT140-208ENST00000566818 PRR36Q9H6K5 1346 aa27.04■■□□□ 1.92
IFT140-208ENST00000566818 GPRASP1Q5JY77 1395 aa27.03■■□□□ 1.92
IFT140-208ENST00000566818 FNBP4Q8N3X1 1017 aaPredicted RBP27.03■■□□□ 1.92
IFT140-208ENST00000566818 L3MBTL2Q969R5 705 aa27.03■■□□□ 1.92
IFT140-208ENST00000566818 TRPC5Q9UL62 973 aaPredicted RBP27.02■■□□□ 1.92
IFT140-208ENST00000566818 ATP7BP35670 1465 aa27.01■■□□□ 1.91
IFT140-208ENST00000566818 HAP1P54257 671 aaPredicted RBP27.01■■□□□ 1.91
IFT140-208ENST00000566818 NBPF1Q3BBV0 1214 aa27.01■■□□□ 1.91
IFT140-208ENST00000566818 SIN3AQ96ST3 1273 aa27.01■■□□□ 1.91
IFT140-208ENST00000566818 LMOD2Q6P5Q4 547 aa27■■□□□ 1.91
IFT140-208ENST00000566818 RGS12O14924 1447 aa26.99■■□□□ 1.91
IFT140-208ENST00000566818 TRPM3Q9HCF6 1732 aaPredicted RBP26.99■■□□□ 1.91
IFT140-208ENST00000566818 NEUROD1Q13562 356 aa26.99■■□□□ 1.91
IFT140-208ENST00000566818 ATRNO75882 1429 aa26.99■■□□□ 1.91
IFT140-208ENST00000566818 ABCA3Q99758 1704 aa26.98■■□□□ 1.91
IFT140-208ENST00000566818 NGDNQ8NEJ9 315 aaKnown RBP26.97■■□□□ 1.91
IFT140-208ENST00000566818 TRPM1Q7Z4N2 1603 aa26.97■■□□□ 1.91
IFT140-208ENST00000566818 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.96■■□□□ 1.91
IFT140-208ENST00000566818 CENPJQ9HC77 1338 aaPredicted RBP26.96■■□□□ 1.91
IFT140-208ENST00000566818 NUDT16Q96DE0 195 aaKnown RBP26.96■■□□□ 1.91
IFT140-208ENST00000566818 TRIM26Q12899 539 aaPredicted RBP26.95■■□□□ 1.9
IFT140-208ENST00000566818 CDK19Q9BWU1 502 aa26.95■■□□□ 1.9
IFT140-208ENST00000566818 TOPAZ1Q8N9V7 1692 aa26.95■■□□□ 1.9
IFT140-208ENST00000566818 ALS2Q96Q42 1657 aa26.95■■□□□ 1.9
IFT140-208ENST00000566818 BCL9LQ86UU0 1499 aa26.94■■□□□ 1.9
IFT140-208ENST00000566818 QRICH2Q9H0J4 1663 aa26.94■■□□□ 1.9
IFT140-208ENST00000566818 SLIT2O94813 1529 aa26.92■■□□□ 1.9
IFT140-208ENST00000566818 ROCK2O75116 1388 aaKnown RBP26.9■■□□□ 1.9
IFT140-208ENST00000566818 PLEKHG5O94827 1062 aa26.9■■□□□ 1.9
IFT140-208ENST00000566818 CABLES1Q8TDN4 633 aa26.9■■□□□ 1.9
IFT140-208ENST00000566818 PLCH1Q4KWH8 1693 aa26.89■■□□□ 1.89
IFT140-208ENST00000566818 PAK3O75914 559 aaPredicted RBP26.88■■□□□ 1.89
IFT140-208ENST00000566818 UNC5CLQ8IV45 518 aa26.88■■□□□ 1.89
IFT140-208ENST00000566818 CCDC61Q9Y6R9 512 aa26.88■■□□□ 1.89
IFT140-208ENST00000566818 NWD2Q9ULI1 1742 aa26.87■■□□□ 1.89
IFT140-208ENST00000566818 POLR3AO14802 1390 aaPredicted RBP26.86■■□□□ 1.89
IFT140-208ENST00000566818 SRPK2P78362 688 aaKnown RBP26.86■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms