RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 CDC42BPGQ6DT37 1551 aa19.94■□□□□ 0.78
HERPUD1-210ENST00000565966 C1orf167Q5SNV9 1468 aa19.93■□□□□ 0.78
HERPUD1-210ENST00000565966 TRAK1Q9UPV9 953 aa19.93■□□□□ 0.78
HERPUD1-210ENST00000565966 AHDC1Q5TGY3 1603 aaPredicted RBP19.93■□□□□ 0.78
HERPUD1-210ENST00000565966 PRAM1Q96QH2 718 aa19.92■□□□□ 0.78
HERPUD1-210ENST00000565966 POGKQ9P215 609 aa19.92■□□□□ 0.78
HERPUD1-210ENST00000565966 COL16A1Q07092 1604 aaPredicted RBP19.91■□□□□ 0.78
HERPUD1-210ENST00000565966 DISP3Q9P2K9 1392 aa19.9■□□□□ 0.78
HERPUD1-210ENST00000565966 NHSL1Q5SYE7 1610 aa19.9■□□□□ 0.78
HERPUD1-210ENST00000565966 ARHGEF28Q8N1W1 1705 aaKnown RBP19.88■□□□□ 0.77
HERPUD1-210ENST00000565966 FMN2Q9NZ56 1722 aa19.88■□□□□ 0.77
HERPUD1-210ENST00000565966 MED1Q15648 1581 aaPredicted RBP19.88■□□□□ 0.77
HERPUD1-210ENST00000565966 SAFB2Q14151 953 aaKnown RBP eCLIP19.88■□□□□ 0.77
HERPUD1-210ENST00000565966 ORAI2Q96SN7 254 aa19.88■□□□□ 0.77
HERPUD1-210ENST00000565966 RGPD8O14715 1765 aaPredicted RBP19.87■□□□□ 0.77
HERPUD1-210ENST00000565966 JCADQ9P266 1359 aa19.86■□□□□ 0.77
HERPUD1-210ENST00000565966 NBPF1Q3BBV0 1214 aa19.86■□□□□ 0.77
HERPUD1-210ENST00000565966 TONSLQ96HA7 1378 aa19.85■□□□□ 0.77
HERPUD1-210ENST00000565966 CLSPNQ9HAW4 1339 aa19.85■□□□□ 0.77
HERPUD1-210ENST00000565966 ESCO1Q5FWF5 840 aa19.85■□□□□ 0.77
HERPUD1-210ENST00000565966 NUTM2FA1L443 756 aa19.84■□□□□ 0.77
HERPUD1-210ENST00000565966 DDX17Q92841 729 aaKnown RBP19.83■□□□□ 0.77
HERPUD1-210ENST00000565966 TRPM1Q7Z4N2 1603 aa19.83■□□□□ 0.76
HERPUD1-210ENST00000565966 SHPRHQ149N8 1683 aa19.82■□□□□ 0.76
HERPUD1-210ENST00000565966 LRRC59Q96AG4 307 aaKnown RBP19.82■□□□□ 0.76
HERPUD1-210ENST00000565966 ADGRB2O60241 1585 aa19.82■□□□□ 0.76
HERPUD1-210ENST00000565966 MINK1Q8N4C8 1332 aaPredicted RBP19.8■□□□□ 0.76
HERPUD1-210ENST00000565966 CCER1Q8TC90 406 aaPredicted RBP19.8■□□□□ 0.76
HERPUD1-210ENST00000565966 HIRIP3Q9BW71 556 aaPredicted RBP19.8■□□□□ 0.76
HERPUD1-210ENST00000565966 NBPF8Q3BBV2 869 aa19.79■□□□□ 0.76
HERPUD1-210ENST00000565966 SOS2Q07890 1332 aaPredicted RBP19.78■□□□□ 0.76
HERPUD1-210ENST00000565966 NPHP3Q7Z494 1330 aa19.78■□□□□ 0.76
HERPUD1-210ENST00000565966 KIF1AQ12756 1690 aa19.78■□□□□ 0.76
HERPUD1-210ENST00000565966 SPATA31A6Q5VVP1 1343 aa19.77■□□□□ 0.76
HERPUD1-210ENST00000565966 WASLO00401 505 aaPredicted RBP19.77■□□□□ 0.76
HERPUD1-210ENST00000565966 FOXO3O43524 673 aa19.77■□□□□ 0.76
HERPUD1-210ENST00000565966 PHF23Q9BUL5 403 aaPredicted RBP19.77■□□□□ 0.76
HERPUD1-210ENST00000565966 USP32Q8NFA0 1604 aa19.76■□□□□ 0.75
HERPUD1-210ENST00000565966 ROCK2O75116 1388 aaKnown RBP19.75■□□□□ 0.75
HERPUD1-210ENST00000565966 EIF3AQ14152 1382 aaKnown RBP19.75■□□□□ 0.75
HERPUD1-210ENST00000565966 ANKARQ7Z5J8 1434 aa19.75■□□□□ 0.75
HERPUD1-210ENST00000565966 PHF8Q9UPP1 1060 aa19.74■□□□□ 0.75
HERPUD1-210ENST00000565966 CENPJQ9HC77 1338 aaPredicted RBP19.73■□□□□ 0.75
HERPUD1-210ENST00000565966 TULP4Q9NRJ4 1543 aa19.72■□□□□ 0.75
HERPUD1-210ENST00000565966 TIMELESSQ9UNS1 1208 aa19.72■□□□□ 0.75
HERPUD1-210ENST00000565966 PXDNQ92626 1479 aa19.72■□□□□ 0.75
HERPUD1-210ENST00000565966 QRICH2Q9H0J4 1663 aa19.71■□□□□ 0.75
HERPUD1-210ENST00000565966 PNPLA6Q8IY17 1366 aa19.71■□□□□ 0.75
HERPUD1-210ENST00000565966 ITSN1Q15811 1721 aa19.71■□□□□ 0.75
HERPUD1-210ENST00000565966 XPCQ01831 940 aaPredicted RBP19.7■□□□□ 0.74
HERPUD1-210ENST00000565966 CDK19Q9BWU1 502 aa19.7■□□□□ 0.74
HERPUD1-210ENST00000565966 GPRASP1Q5JY77 1395 aa19.7■□□□□ 0.74
HERPUD1-210ENST00000565966 KRT28Q7Z3Y7 464 aa19.69■□□□□ 0.74
HERPUD1-210ENST00000565966 PMFBP1Q8TBY8 1022 aa19.69■□□□□ 0.74
HERPUD1-210ENST00000565966 PRR36Q9H6K5 1346 aa19.69■□□□□ 0.74
HERPUD1-210ENST00000565966 LRP6O75581 1613 aa19.69■□□□□ 0.74
HERPUD1-210ENST00000565966 RALGAPBQ86X10 1494 aa19.68■□□□□ 0.74
HERPUD1-210ENST00000565966 NUTM2BA6NNL0 878 aaPredicted RBP19.68■□□□□ 0.74
HERPUD1-210ENST00000565966 NUTM2EB1AL46 878 aaPredicted RBP19.68■□□□□ 0.74
HERPUD1-210ENST00000565966 PSME1Q06323 249 aa19.68■□□□□ 0.74
HERPUD1-210ENST00000565966 ILDR2Q71H61 639 aa19.68■□□□□ 0.74
HERPUD1-210ENST00000565966 NUTM2AQ8IVF1 878 aaPredicted RBP19.68■□□□□ 0.74
HERPUD1-210ENST00000565966 NUDT16Q96DE0 195 aaKnown RBP19.68■□□□□ 0.74
HERPUD1-210ENST00000565966 MEX3CQ5U5Q3 659 aaKnown RBP19.67■□□□□ 0.74
HERPUD1-210ENST00000565966 COL22A1Q8NFW1 1626 aaPredicted RBP19.66■□□□□ 0.74
HERPUD1-210ENST00000565966 CARD11Q9BXL7 1154 aa19.66■□□□□ 0.74
HERPUD1-210ENST00000565966 RGS17Q9UGC6 210 aaPredicted RBP19.66■□□□□ 0.74
HERPUD1-210ENST00000565966 ATP7BP35670 1465 aa19.65■□□□□ 0.74
HERPUD1-210ENST00000565966 SPATA31A3Q5VYP0 1347 aa19.64■□□□□ 0.73
HERPUD1-210ENST00000565966 CCDC61Q9Y6R9 512 aa19.63■□□□□ 0.73
HERPUD1-210ENST00000565966 SBNO1A3KN83 1393 aa19.62■□□□□ 0.73
HERPUD1-210ENST00000565966 SRPK2P78362 688 aaKnown RBP19.62■□□□□ 0.73
HERPUD1-210ENST00000565966 NGDNQ8NEJ9 315 aaKnown RBP19.62■□□□□ 0.73
HERPUD1-210ENST00000565966 TOPAZ1Q8N9V7 1692 aa19.62■□□□□ 0.73
HERPUD1-210ENST00000565966 EVC2Q86UK5 1308 aa19.6■□□□□ 0.73
HERPUD1-210ENST00000565966 CABP2Q9NPB3 220 aa19.6■□□□□ 0.73
HERPUD1-210ENST00000565966 TNS3Q68CZ2 1445 aa19.59■□□□□ 0.73
HERPUD1-210ENST00000565966 TRPM3Q9HCF6 1732 aaPredicted RBP19.59■□□□□ 0.73
HERPUD1-210ENST00000565966 MARF1Q9Y4F3 1742 aaKnown RBP19.59■□□□□ 0.73
HERPUD1-210ENST00000565966 PLEKHG3A1L390 1219 aa19.59■□□□□ 0.73
HERPUD1-210ENST00000565966 ADAMTS2O95450 1211 aa19.58■□□□□ 0.72
HERPUD1-210ENST00000565966 ZNF772Q68DY9 489 aaPredicted RBP19.58■□□□□ 0.72
HERPUD1-210ENST00000565966 POTEAQ6S8J7 498 aa19.57■□□□□ 0.72
HERPUD1-210ENST00000565966 C8orf37Q96NL8 207 aa19.57■□□□□ 0.72
HERPUD1-210ENST00000565966 ARHGEF10O15013 1369 aa19.57■□□□□ 0.72
HERPUD1-210ENST00000565966 ACEP12821 1306 aa19.56■□□□□ 0.72
HERPUD1-210ENST00000565966 LMOD2Q6P5Q4 547 aa19.56■□□□□ 0.72
HERPUD1-210ENST00000565966 POLR3AO14802 1390 aaPredicted RBP19.56■□□□□ 0.72
HERPUD1-210ENST00000565966 SBNO2Q9Y2G9 1366 aa19.56■□□□□ 0.72
HERPUD1-210ENST00000565966 ALS2Q96Q42 1657 aa19.56■□□□□ 0.72
HERPUD1-210ENST00000565966 PPIP5K1Q6PFW1 1433 aa19.55■□□□□ 0.72
HERPUD1-210ENST00000565966 AFF2P51816 1311 aa19.54■□□□□ 0.72
HERPUD1-210ENST00000565966 NGLY1Q96IV0 654 aa19.54■□□□□ 0.72
HERPUD1-210ENST00000565966 PAK3O75914 559 aaPredicted RBP19.53■□□□□ 0.72
HERPUD1-210ENST00000565966 CABP1Q9NZU7 370 aa19.52■□□□□ 0.72
HERPUD1-210ENST00000565966 ABCA3Q99758 1704 aa19.51■□□□□ 0.71
HERPUD1-210ENST00000565966 HAP1P54257 671 aaPredicted RBP19.5■□□□□ 0.71
HERPUD1-210ENST00000565966 CABLES1Q8TDN4 633 aa19.5■□□□□ 0.71
HERPUD1-210ENST00000565966 ATAD2Q6PL18 1390 aa19.49■□□□□ 0.71
HERPUD1-210ENST00000565966 ST20-MTHFSA0A0A6YYL1 179 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms