RNA–Protein interactions for RNA: ENST00000565550.1

SPSB3-207, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 898 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-207ENST00000565550 LRPPRCP42704 1394 aaKnown RBP28.01■■■□□ 2.07
SPSB3-207ENST00000565550 ADAMTS2O95450 1211 aa28.01■■■□□ 2.07
SPSB3-207ENST00000565550 ESCO1Q5FWF5 840 aa28.01■■■□□ 2.07
SPSB3-207ENST00000565550 LAMC1P11047 1609 aa27.99■■■□□ 2.07
SPSB3-207ENST00000565550 ABCC11Q96J66 1382 aa27.99■■■□□ 2.07
SPSB3-207ENST00000565550 TECPR2O15040 1411 aa27.98■■■□□ 2.07
SPSB3-207ENST00000565550 PIK3C2GO75747 1445 aa27.98■■■□□ 2.07
SPSB3-207ENST00000565550 NGLY1Q96IV0 654 aa27.97■■■□□ 2.07
SPSB3-207ENST00000565550 QTRT2Q9H974 415 aaKnown RBP27.97■■■□□ 2.07
SPSB3-207ENST00000565550 IFT172Q9UG01 1749 aa27.96■■■□□ 2.07
SPSB3-207ENST00000565550 NUTM2FA1L443 756 aa27.96■■■□□ 2.07
SPSB3-207ENST00000565550 PLEKHH1Q9ULM0 1364 aa27.96■■■□□ 2.07
SPSB3-207ENST00000565550 UPF1Q92900 1129 aaKnown RBP eCLIP27.95■■■□□ 2.06
SPSB3-207ENST00000565550 CDC42BPGQ6DT37 1551 aa27.94■■■□□ 2.06
SPSB3-207ENST00000565550 NPHP3Q7Z494 1330 aa27.94■■■□□ 2.06
SPSB3-207ENST00000565550 FOXO3O43524 673 aa27.94■■■□□ 2.06
SPSB3-207ENST00000565550 C14orf93Q9H972 538 aaKnown RBP27.94■■■□□ 2.06
SPSB3-207ENST00000565550 YTHDC2Q9H6S0 1430 aaKnown RBP27.92■■■□□ 2.06
SPSB3-207ENST00000565550 CDK12Q9NYV4 1490 aaPredicted RBP27.92■■■□□ 2.06
SPSB3-207ENST00000565550 RAB3GAP2Q9H2M9 1393 aa27.92■■■□□ 2.06
SPSB3-207ENST00000565550 RBM6P78332 1123 aaKnown RBP27.92■■■□□ 2.06
SPSB3-207ENST00000565550 XPCQ01831 940 aaPredicted RBP27.91■■■□□ 2.06
SPSB3-207ENST00000565550 CFAP70Q5T0N1 1121 aa27.9■■■□□ 2.06
SPSB3-207ENST00000565550 SIRT1Q96EB6 747 aa27.89■■■□□ 2.06
SPSB3-207ENST00000565550 USP21Q9UK80 565 aa27.87■■■□□ 2.05
SPSB3-207ENST00000565550 PXDNQ92626 1479 aa27.86■■■□□ 2.05
SPSB3-207ENST00000565550 NRXN1Q9ULB1 1477 aa27.85■■■□□ 2.05
SPSB3-207ENST00000565550 KNDC1Q76NI1 1749 aa27.85■■■□□ 2.05
SPSB3-207ENST00000565550 DHX57Q6P158 1386 aaKnown RBP27.85■■■□□ 2.05
SPSB3-207ENST00000565550 FNBP4Q8N3X1 1017 aaPredicted RBP27.84■■■□□ 2.05
SPSB3-207ENST00000565550 RGS12O14924 1447 aa27.83■■■□□ 2.05
SPSB3-207ENST00000565550 MYOM2P54296 1465 aa27.83■■■□□ 2.04
SPSB3-207ENST00000565550 COL22A1Q8NFW1 1626 aaPredicted RBP27.81■■■□□ 2.04
SPSB3-207ENST00000565550 TRPC5Q9UL62 973 aaPredicted RBP27.81■■■□□ 2.04
SPSB3-207ENST00000565550 PRAM1Q96QH2 718 aa27.8■■■□□ 2.04
SPSB3-207ENST00000565550 SAFB2Q14151 953 aaKnown RBP eCLIP27.79■■■□□ 2.04
SPSB3-207ENST00000565550 KRT28Q7Z3Y7 464 aa27.77■■■□□ 2.04
SPSB3-207ENST00000565550 FMN2Q9NZ56 1722 aa27.77■■■□□ 2.04
SPSB3-207ENST00000565550 SPATA31A3Q5VYP0 1347 aa27.76■■■□□ 2.03
SPSB3-207ENST00000565550 POGKQ9P215 609 aa27.75■■■□□ 2.03
SPSB3-207ENST00000565550 PHF8Q9UPP1 1060 aa27.75■■■□□ 2.03
SPSB3-207ENST00000565550 KDM2AQ9Y2K7 1162 aa27.75■■■□□ 2.03
SPSB3-207ENST00000565550 ATRNO75882 1429 aa27.73■■■□□ 2.03
SPSB3-207ENST00000565550 DCAF11Q8TEB1 546 aa27.72■■■□□ 2.03
SPSB3-207ENST00000565550 HRCP23327 699 aa27.71■■■□□ 2.03
SPSB3-207ENST00000565550 TRAK1Q9UPV9 953 aa27.71■■■□□ 2.03
SPSB3-207ENST00000565550 BCL9LQ86UU0 1499 aa27.7■■■□□ 2.03
SPSB3-207ENST00000565550 KIF1AQ12756 1690 aa27.69■■■□□ 2.02
SPSB3-207ENST00000565550 PSME1Q06323 249 aa27.69■■■□□ 2.02
SPSB3-207ENST00000565550 DLC1Q96QB1 1528 aa27.67■■■□□ 2.02
SPSB3-207ENST00000565550 ADGRB1O14514 1584 aa27.66■■■□□ 2.02
SPSB3-207ENST00000565550 PMFBP1Q8TBY8 1022 aa27.65■■■□□ 2.02
SPSB3-207ENST00000565550 GJD4Q96KN9 370 aaPredicted RBP27.65■■■□□ 2.02
SPSB3-207ENST00000565550 HIRIP3Q9BW71 556 aaPredicted RBP27.65■■■□□ 2.02
SPSB3-207ENST00000565550 RGPD8O14715 1765 aaPredicted RBP27.64■■■□□ 2.02
SPSB3-207ENST00000565550 STAC3Q96MF2 364 aa27.64■■■□□ 2.02
SPSB3-207ENST00000565550 ATAD2Q6PL18 1390 aa27.63■■■□□ 2.01
SPSB3-207ENST00000565550 PLEKHG5O94827 1062 aa27.63■■■□□ 2.01
SPSB3-207ENST00000565550 HAP1P54257 671 aaPredicted RBP27.63■■■□□ 2.01
SPSB3-207ENST00000565550 LMOD2Q6P5Q4 547 aa27.63■■■□□ 2.01
SPSB3-207ENST00000565550 UNC5CLQ8IV45 518 aa27.63■■■□□ 2.01
SPSB3-207ENST00000565550 CABLES1Q8TDN4 633 aa27.63■■■□□ 2.01
SPSB3-207ENST00000565550 TNS3Q68CZ2 1445 aa27.63■■■□□ 2.01
SPSB3-207ENST00000565550 TRIM26Q12899 539 aaPredicted RBP27.62■■■□□ 2.01
SPSB3-207ENST00000565550 MINK1Q8N4C8 1332 aaPredicted RBP27.62■■■□□ 2.01
SPSB3-207ENST00000565550 MARF1Q9Y4F3 1742 aaKnown RBP27.61■■■□□ 2.01
SPSB3-207ENST00000565550 ANKARQ7Z5J8 1434 aa27.61■■■□□ 2.01
SPSB3-207ENST00000565550 SBNO1A3KN83 1393 aa27.6■■■□□ 2.01
SPSB3-207ENST00000565550 SLIT2O94813 1529 aa27.59■■■□□ 2.01
SPSB3-207ENST00000565550 WASLO00401 505 aaPredicted RBP27.56■■■□□ 2
SPSB3-207ENST00000565550 PRR36Q9H6K5 1346 aa27.56■■■□□ 2
SPSB3-207ENST00000565550 ARHGEF10O15013 1369 aa27.56■■■□□ 2
SPSB3-207ENST00000565550 ADGRB2O60241 1585 aa27.56■■■□□ 2
SPSB3-207ENST00000565550 USP32Q8NFA0 1604 aa27.56■■■□□ 2
SPSB3-207ENST00000565550 RALGAPBQ86X10 1494 aa27.52■■■□□ 2
SPSB3-207ENST00000565550 EIF3AQ14152 1382 aaKnown RBP27.52■■■□□ 2
SPSB3-207ENST00000565550 GPRASP1Q5JY77 1395 aa27.5■■□□□ 1.99
SPSB3-207ENST00000565550 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.5■■□□□ 1.99
SPSB3-207ENST00000565550 FAM83GA6ND36 823 aa27.49■■□□□ 1.99
SPSB3-207ENST00000565550 VPS72Q15906 364 aa27.49■■□□□ 1.99
SPSB3-207ENST00000565550 TULP4Q9NRJ4 1543 aa27.48■■□□□ 1.99
SPSB3-207ENST00000565550 NGDNQ8NEJ9 315 aaKnown RBP27.48■■□□□ 1.99
SPSB3-207ENST00000565550 GLI3P10071 1580 aa27.48■■□□□ 1.99
SPSB3-207ENST00000565550 CCDC125Q86Z20 511 aa27.46■■□□□ 1.99
SPSB3-207ENST00000565550 CCDC9Q9Y3X0 531 aaKnown RBP27.46■■□□□ 1.99
SPSB3-207ENST00000565550 SEPT12Q8IYM1 358 aa27.44■■□□□ 1.98
SPSB3-207ENST00000565550 NUDT16Q96DE0 195 aaKnown RBP27.44■■□□□ 1.98
SPSB3-207ENST00000565550 PAK3O75914 559 aaPredicted RBP27.43■■□□□ 1.98
SPSB3-207ENST00000565550 TRPM3Q9HCF6 1732 aaPredicted RBP27.41■■□□□ 1.98
SPSB3-207ENST00000565550 ONECUT3O60422 494 aaPredicted RBP27.41■■□□□ 1.98
SPSB3-207ENST00000565550 CDK19Q9BWU1 502 aa27.41■■□□□ 1.98
SPSB3-207ENST00000565550 ABCA3Q99758 1704 aa27.41■■□□□ 1.98
SPSB3-207ENST00000565550 BTG4Q9NY30 223 aa27.4■■□□□ 1.98
SPSB3-207ENST00000565550 NBPF1Q3BBV0 1214 aa27.39■■□□□ 1.98
SPSB3-207ENST00000565550 ARHGEF28Q8N1W1 1705 aaKnown RBP27.38■■□□□ 1.97
SPSB3-207ENST00000565550 EP400Q96L91 3159 aa27.38■■□□□ 1.97
SPSB3-207ENST00000565550 PLCH1Q4KWH8 1693 aa27.38■■□□□ 1.97
SPSB3-207ENST00000565550 NWD2Q9ULI1 1742 aa27.38■■□□□ 1.97
SPSB3-207ENST00000565550 ATP7BP35670 1465 aa27.37■■□□□ 1.97
SPSB3-207ENST00000565550 ALS2Q96Q42 1657 aa27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms