RNA–Protein interactions for RNA: ENST00000565467.1

AC009041.2-205, humanhuman

TSL 1 (best)

Gene AC009041.2, Length 3,726 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.2-205ENST00000565467 COG3Q96JB2 828 aa23.53■■□□□ 1.36
AC009041.2-205ENST00000565467 RARSP54136 660 aaKnown RBP23.52■■□□□ 1.36
AC009041.2-205ENST00000565467 MIS18AQ9NYP9 233 aa23.52■■□□□ 1.36
AC009041.2-205ENST00000565467 SLC26A8Q96RN1 970 aa23.51■■□□□ 1.35
AC009041.2-205ENST00000565467 PNNQ9H307 717 aaKnown RBP23.51■■□□□ 1.35
AC009041.2-205ENST00000565467 SEC24BO95487 1268 aa23.51■■□□□ 1.35
AC009041.2-205ENST00000565467 ANP32BQ92688 251 aaKnown RBP23.51■■□□□ 1.35
AC009041.2-205ENST00000565467 KDM5BQ9UGL1 1544 aa23.5■■□□□ 1.35
AC009041.2-205ENST00000565467 SSH1Q8WYL5 1049 aa23.5■■□□□ 1.35
AC009041.2-205ENST00000565467 ADGRL1O94910 1474 aa23.5■■□□□ 1.35
AC009041.2-205ENST00000565467 AMPHP49418 695 aa23.5■■□□□ 1.35
AC009041.2-205ENST00000565467 PCDHB15Q9Y5E8 787 aa23.5■■□□□ 1.35
AC009041.2-205ENST00000565467 EMILIN1Q9Y6C2 1016 aa23.48■■□□□ 1.35
AC009041.2-205ENST00000565467 NCKAP5LQ9HCH0 1330 aa23.48■■□□□ 1.35
AC009041.2-205ENST00000565467 TRIM44Q96DX7 344 aaPredicted RBP23.47■■□□□ 1.35
AC009041.2-205ENST00000565467 ZRANB1Q9UGI0 708 aa23.47■■□□□ 1.35
AC009041.2-205ENST00000565467 OS9Q13438 667 aaPredicted RBP23.47■■□□□ 1.35
AC009041.2-205ENST00000565467 TMEM57Q8N5G2 664 aa23.47■■□□□ 1.35
AC009041.2-205ENST00000565467 GCC2Q8IWJ2 1684 aa23.46■■□□□ 1.35
AC009041.2-205ENST00000565467 FANCAO15360 1455 aa23.46■■□□□ 1.35
AC009041.2-205ENST00000565467 TMPOP42166 694 aaKnown RBP23.46■■□□□ 1.35
AC009041.2-205ENST00000565467 PLCB2Q00722 1185 aa23.46■■□□□ 1.35
AC009041.2-205ENST00000565467 NAP1L5Q96NT1 182 aaPredicted RBP23.46■■□□□ 1.35
AC009041.2-205ENST00000565467 LRPPRCP42704 1394 aaKnown RBP23.46■■□□□ 1.35
AC009041.2-205ENST00000565467 C22orf23Q9BZE7 217 aa23.45■■□□□ 1.35
AC009041.2-205ENST00000565467 DDX19BQ9UMR2 479 aa23.45■■□□□ 1.35
AC009041.2-205ENST00000565467 TRIM6-TRIM34B2RNG4 842 aa23.44■■□□□ 1.34
AC009041.2-205ENST00000565467 FAM83GA6ND36 823 aa23.44■■□□□ 1.34
AC009041.2-205ENST00000565467 NME9Q86XW9 330 aa23.44■■□□□ 1.34
AC009041.2-205ENST00000565467 PDE3AQ14432 1141 aa23.43■■□□□ 1.34
AC009041.2-205ENST00000565467 EIF2S2P20042 333 aaKnown RBP23.43■■□□□ 1.34
AC009041.2-205ENST00000565467 NUP160Q12769 1436 aa23.43■■□□□ 1.34
AC009041.2-205ENST00000565467 ITSN2Q9NZM3 1697 aa23.42■■□□□ 1.34
AC009041.2-205ENST00000565467 SCAF11Q99590 1463 aaKnown RBP23.42■■□□□ 1.34
AC009041.2-205ENST00000565467 BCORL1Q5H9F3 1711 aa23.41■■□□□ 1.34
AC009041.2-205ENST00000565467 SULT6B1Q6IMI4 303 aa23.41■■□□□ 1.34
AC009041.2-205ENST00000565467 PLCH2O75038 1416 aa23.41■■□□□ 1.34
AC009041.2-205ENST00000565467 CCDC9Q9Y3X0 531 aaKnown RBP23.4■■□□□ 1.34
AC009041.2-205ENST00000565467 MBD5Q9P267 1494 aa23.4■■□□□ 1.34
AC009041.2-205ENST00000565467 GOLGA6L22H0YM25 854 aa23.4■■□□□ 1.34
AC009041.2-205ENST00000565467 MVPQ14764 893 aaKnown RBP23.4■■□□□ 1.34
AC009041.2-205ENST00000565467 ATF7IPQ6VMQ6 1270 aa23.39■■□□□ 1.33
AC009041.2-205ENST00000565467 RILPL2Q969X0 211 aa23.38■■□□□ 1.33
AC009041.2-205ENST00000565467 CD109Q6YHK3 1445 aa23.38■■□□□ 1.33
AC009041.2-205ENST00000565467 TRIM27P14373 513 aa23.38■■□□□ 1.33
AC009041.2-205ENST00000565467 ARID3AQ99856 593 aa23.38■■□□□ 1.33
AC009041.2-205ENST00000565467 ANO8Q9HCE9 1232 aaPredicted RBP23.38■■□□□ 1.33
AC009041.2-205ENST00000565467 STAC3Q96MF2 364 aa23.37■■□□□ 1.33
AC009041.2-205ENST00000565467 USP35Q9P2H5 1018 aa23.37■■□□□ 1.33
AC009041.2-205ENST00000565467 C8orf34Q49A92 452 aa23.37■■□□□ 1.33
AC009041.2-205ENST00000565467 CASC1Q6TDU7 716 aa23.37■■□□□ 1.33
AC009041.2-205ENST00000565467 CEBPAP49715 358 aaPredicted RBP23.36■■□□□ 1.33
AC009041.2-205ENST00000565467 MCM10Q7L590 875 aa23.36■■□□□ 1.33
AC009041.2-205ENST00000565467 UHRF1BP1Q6BDS2 1440 aa23.35■■□□□ 1.33
AC009041.2-205ENST00000565467 NKTRP30414 1462 aaKnown RBP23.35■■□□□ 1.33
AC009041.2-205ENST00000565467 RNF123Q5XPI4 1314 aa23.35■■□□□ 1.33
AC009041.2-205ENST00000565467 C14orf93Q9H972 538 aaKnown RBP23.35■■□□□ 1.33
AC009041.2-205ENST00000565467 GPRASP1Q5JY77 1395 aa23.35■■□□□ 1.33
AC009041.2-205ENST00000565467 ADGRL2O95490 1459 aa23.35■■□□□ 1.33
AC009041.2-205ENST00000565467 TWISTNBQ3B726 338 aaPredicted RBP23.35■■□□□ 1.33
AC009041.2-205ENST00000565467 NGEFQ8N5V2 710 aa23.34■■□□□ 1.33
AC009041.2-205ENST00000565467 STK31Q9BXU1 1019 aa23.33■■□□□ 1.33
AC009041.2-205ENST00000565467 ZNF330Q9Y3S2 320 aaPredicted RBP23.33■■□□□ 1.33
AC009041.2-205ENST00000565467 PLA2R1Q13018 1463 aa23.33■■□□□ 1.33
AC009041.2-205ENST00000565467 ABCC10Q5T3U5 1492 aa23.33■■□□□ 1.33
AC009041.2-205ENST00000565467 MAGI2Q86UL8 1455 aa23.33■■□□□ 1.33
AC009041.2-205ENST00000565467 COL17A1Q9UMD9 1497 aaPredicted RBP23.32■■□□□ 1.32
AC009041.2-205ENST00000565467 FYB1O15117 783 aa23.32■■□□□ 1.32
AC009041.2-205ENST00000565467 KRT24Q2M2I5 525 aa23.32■■□□□ 1.32
AC009041.2-205ENST00000565467 GOLGA6L3A6NEY3 463 aa23.31■■□□□ 1.32
AC009041.2-205ENST00000565467 HDGFP51858 240 aaKnown RBP23.31■■□□□ 1.32
AC009041.2-205ENST00000565467 UGGT1Q9NYU2 1555 aa23.31■■□□□ 1.32
AC009041.2-205ENST00000565467 CALD1Q05682 793 aaKnown RBP23.3■■□□□ 1.32
AC009041.2-205ENST00000565467 WDR63Q8IWG1 891 aa23.3■■□□□ 1.32
AC009041.2-205ENST00000565467 ERCC6L2Q5T890 1561 aa23.3■■□□□ 1.32
AC009041.2-205ENST00000565467 KCNJ4P48050 445 aa23.3■■□□□ 1.32
AC009041.2-205ENST00000565467 FKBP5Q13451 457 aaPredicted RBP23.3■■□□□ 1.32
AC009041.2-205ENST00000565467 SMARCA5O60264 1052 aaPredicted RBP23.28■■□□□ 1.32
AC009041.2-205ENST00000565467 TSPYL4Q9UJ04 414 aa23.28■■□□□ 1.32
AC009041.2-205ENST00000565467 KDM5CP41229 1560 aa23.28■■□□□ 1.32
AC009041.2-205ENST00000565467 NLRP6P59044 892 aa23.28■■□□□ 1.32
AC009041.2-205ENST00000565467 KIF16BQ96L93 1317 aa23.27■■□□□ 1.32
AC009041.2-205ENST00000565467 XPCQ01831 940 aaPredicted RBP23.27■■□□□ 1.32
AC009041.2-205ENST00000565467 PHACTR3Q96KR7 559 aa23.27■■□□□ 1.32
AC009041.2-205ENST00000565467 NAP1L2Q9ULW6 460 aaPredicted RBP23.26■■□□□ 1.31
AC009041.2-205ENST00000565467 TSPYL6Q8N831 410 aa23.26■■□□□ 1.31
AC009041.2-205ENST00000565467 ASXL2Q76L83 1435 aa23.26■■□□□ 1.31
AC009041.2-205ENST00000565467 GNAI1P63096 354 aa23.26■■□□□ 1.31
AC009041.2-205ENST00000565467 CHMP4BQ9H444 224 aaKnown RBP23.25■■□□□ 1.31
AC009041.2-205ENST00000565467 EID1Q9Y6B2 187 aa23.25■■□□□ 1.31
AC009041.2-205ENST00000565467 F6X3S4 739 aa23.25■■□□□ 1.31
AC009041.2-205ENST00000565467 HAP1P54257 671 aaPredicted RBP23.25■■□□□ 1.31
AC009041.2-205ENST00000565467 SLC4A2P04920 1241 aa23.24■■□□□ 1.31
AC009041.2-205ENST00000565467 SLC52A1Q9NWF4 448 aa23.24■■□□□ 1.31
AC009041.2-205ENST00000565467 PTMAP06454 111 aaKnown RBP23.24■■□□□ 1.31
AC009041.2-205ENST00000565467 TSHZ3Q63HK5 1081 aa23.24■■□□□ 1.31
AC009041.2-205ENST00000565467 DUOX2Q9NRD8 1548 aa23.24■■□□□ 1.31
AC009041.2-205ENST00000565467 ARHGEF12Q9NZN5 1544 aa23.23■■□□□ 1.31
AC009041.2-205ENST00000565467 NUDT16Q96DE0 195 aaKnown RBP23.23■■□□□ 1.31
AC009041.2-205ENST00000565467 TBC1D2Q9BYX2 928 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms