RNA–Protein interactions for RNA: ENST00000565413.1

E4F1-207, Transcript of E4F transcription factor 1, humanhuman

TSL 3

Gene E4F1, Length 940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-207ENST00000565413 IFT172Q9UG01 1749 aa29.33■■■□□ 2.29
E4F1-207ENST00000565413 CDK12Q9NYV4 1490 aaPredicted RBP29.32■■■□□ 2.28
E4F1-207ENST00000565413 ESCO1Q5FWF5 840 aa29.32■■■□□ 2.28
E4F1-207ENST00000565413 NGLY1Q96IV0 654 aa29.32■■■□□ 2.28
E4F1-207ENST00000565413 NPHP3Q7Z494 1330 aa29.31■■■□□ 2.28
E4F1-207ENST00000565413 ADAMTS2O95450 1211 aa29.31■■■□□ 2.28
E4F1-207ENST00000565413 LRPPRCP42704 1394 aaKnown RBP29.3■■■□□ 2.28
E4F1-207ENST00000565413 TECPR2O15040 1411 aa29.28■■■□□ 2.28
E4F1-207ENST00000565413 QTRT2Q9H974 415 aaKnown RBP29.28■■■□□ 2.28
E4F1-207ENST00000565413 PIK3C2GO75747 1445 aa29.28■■■□□ 2.28
E4F1-207ENST00000565413 ABCC11Q96J66 1382 aa29.26■■■□□ 2.28
E4F1-207ENST00000565413 RBM6P78332 1123 aaKnown RBP29.26■■■□□ 2.27
E4F1-207ENST00000565413 TMEM132EQ6IEE7 984 aa29.25■■■□□ 2.27
E4F1-207ENST00000565413 WAPLQ7Z5K2 1190 aa29.25■■■□□ 2.27
E4F1-207ENST00000565413 KNDC1Q76NI1 1749 aa29.25■■■□□ 2.27
E4F1-207ENST00000565413 UPF1Q92900 1129 aaKnown RBP eCLIP29.24■■■□□ 2.27
E4F1-207ENST00000565413 YTHDC2Q9H6S0 1430 aaKnown RBP29.21■■■□□ 2.27
E4F1-207ENST00000565413 NUTM2FA1L443 756 aa29.2■■■□□ 2.26
E4F1-207ENST00000565413 FOXO3O43524 673 aa29.2■■■□□ 2.26
E4F1-207ENST00000565413 USP21Q9UK80 565 aa29.19■■■□□ 2.26
E4F1-207ENST00000565413 COL22A1Q8NFW1 1626 aaPredicted RBP29.19■■■□□ 2.26
E4F1-207ENST00000565413 DHX57Q6P158 1386 aaKnown RBP29.17■■■□□ 2.26
E4F1-207ENST00000565413 PXDNQ92626 1479 aa29.17■■■□□ 2.26
E4F1-207ENST00000565413 PLEKHH1Q9ULM0 1364 aa29.16■■■□□ 2.26
E4F1-207ENST00000565413 XPCQ01831 940 aaPredicted RBP29.16■■■□□ 2.26
E4F1-207ENST00000565413 C14orf93Q9H972 538 aaKnown RBP29.16■■■□□ 2.26
E4F1-207ENST00000565413 TRPC5Q9UL62 973 aaPredicted RBP29.16■■■□□ 2.26
E4F1-207ENST00000565413 MYOM2P54296 1465 aa29.16■■■□□ 2.26
E4F1-207ENST00000565413 RAB3GAP2Q9H2M9 1393 aa29.15■■■□□ 2.26
E4F1-207ENST00000565413 RGS12O14924 1447 aa29.15■■■□□ 2.26
E4F1-207ENST00000565413 SIRT1Q96EB6 747 aa29.15■■■□□ 2.26
E4F1-207ENST00000565413 FMN2Q9NZ56 1722 aa29.14■■■□□ 2.25
E4F1-207ENST00000565413 KIF1AQ12756 1690 aa29.12■■■□□ 2.25
E4F1-207ENST00000565413 FNBP4Q8N3X1 1017 aaPredicted RBP29.12■■■□□ 2.25
E4F1-207ENST00000565413 NRXN1Q9ULB1 1477 aa29.11■■■□□ 2.25
E4F1-207ENST00000565413 CFAP70Q5T0N1 1121 aa29.1■■■□□ 2.25
E4F1-207ENST00000565413 POGKQ9P215 609 aa29.07■■■□□ 2.24
E4F1-207ENST00000565413 MARF1Q9Y4F3 1742 aaKnown RBP29.06■■■□□ 2.24
E4F1-207ENST00000565413 PSME1Q06323 249 aa29.05■■■□□ 2.24
E4F1-207ENST00000565413 PRAM1Q96QH2 718 aa29.05■■■□□ 2.24
E4F1-207ENST00000565413 ATAD2Q6PL18 1390 aa29.04■■■□□ 2.24
E4F1-207ENST00000565413 SAFB2Q14151 953 aaKnown RBP eCLIP29.04■■■□□ 2.24
E4F1-207ENST00000565413 KRT28Q7Z3Y7 464 aa29.04■■■□□ 2.24
E4F1-207ENST00000565413 PHF8Q9UPP1 1060 aa29.04■■■□□ 2.24
E4F1-207ENST00000565413 ATRNO75882 1429 aa29.03■■■□□ 2.24
E4F1-207ENST00000565413 SPATA31A3Q5VYP0 1347 aa29.03■■■□□ 2.24
E4F1-207ENST00000565413 HAP1P54257 671 aaPredicted RBP29.03■■■□□ 2.24
E4F1-207ENST00000565413 DLC1Q96QB1 1528 aa28.99■■■□□ 2.23
E4F1-207ENST00000565413 RGPD8O14715 1765 aaPredicted RBP28.99■■■□□ 2.23
E4F1-207ENST00000565413 STAC3Q96MF2 364 aa28.97■■■□□ 2.23
E4F1-207ENST00000565413 KDM2AQ9Y2K7 1162 aa28.97■■■□□ 2.23
E4F1-207ENST00000565413 BCL9LQ86UU0 1499 aa28.97■■■□□ 2.23
E4F1-207ENST00000565413 TNS3Q68CZ2 1445 aa28.96■■■□□ 2.23
E4F1-207ENST00000565413 DCAF11Q8TEB1 546 aa28.96■■■□□ 2.23
E4F1-207ENST00000565413 LMOD2Q6P5Q4 547 aa28.95■■■□□ 2.22
E4F1-207ENST00000565413 ANKARQ7Z5J8 1434 aa28.94■■■□□ 2.22
E4F1-207ENST00000565413 EIF3AQ14152 1382 aaKnown RBP28.94■■■□□ 2.22
E4F1-207ENST00000565413 GJD4Q96KN9 370 aaPredicted RBP28.94■■■□□ 2.22
E4F1-207ENST00000565413 TRAK1Q9UPV9 953 aa28.94■■■□□ 2.22
E4F1-207ENST00000565413 ARHGEF10O15013 1369 aa28.93■■■□□ 2.22
E4F1-207ENST00000565413 HRCP23327 699 aa28.93■■■□□ 2.22
E4F1-207ENST00000565413 UNC5CLQ8IV45 518 aa28.93■■■□□ 2.22
E4F1-207ENST00000565413 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.92■■■□□ 2.22
E4F1-207ENST00000565413 USP32Q8NFA0 1604 aa28.92■■■□□ 2.22
E4F1-207ENST00000565413 EP400Q96L91 3159 aa28.92■■■□□ 2.22
E4F1-207ENST00000565413 SBNO1A3KN83 1393 aa28.91■■■□□ 2.22
E4F1-207ENST00000565413 ADGRB1O14514 1584 aa28.91■■■□□ 2.22
E4F1-207ENST00000565413 ADGRB2O60241 1585 aa28.91■■■□□ 2.22
E4F1-207ENST00000565413 PLEKHG5O94827 1062 aa28.89■■■□□ 2.22
E4F1-207ENST00000565413 PMFBP1Q8TBY8 1022 aa28.89■■■□□ 2.22
E4F1-207ENST00000565413 HIRIP3Q9BW71 556 aaPredicted RBP28.88■■■□□ 2.21
E4F1-207ENST00000565413 SLIT2O94813 1529 aa28.88■■■□□ 2.21
E4F1-207ENST00000565413 MINK1Q8N4C8 1332 aaPredicted RBP28.87■■■□□ 2.21
E4F1-207ENST00000565413 GPRASP1Q5JY77 1395 aa28.87■■■□□ 2.21
E4F1-207ENST00000565413 CCDC125Q86Z20 511 aa28.85■■■□□ 2.21
E4F1-207ENST00000565413 CABLES1Q8TDN4 633 aa28.85■■■□□ 2.21
E4F1-207ENST00000565413 RALGAPBQ86X10 1494 aa28.83■■■□□ 2.21
E4F1-207ENST00000565413 CCDC9Q9Y3X0 531 aaKnown RBP28.82■■■□□ 2.2
E4F1-207ENST00000565413 TULP4Q9NRJ4 1543 aa28.81■■■□□ 2.2
E4F1-207ENST00000565413 WASLO00401 505 aaPredicted RBP28.81■■■□□ 2.2
E4F1-207ENST00000565413 NWD2Q9ULI1 1742 aa28.8■■■□□ 2.2
E4F1-207ENST00000565413 NGDNQ8NEJ9 315 aaKnown RBP28.79■■■□□ 2.2
E4F1-207ENST00000565413 ABCA3Q99758 1704 aa28.78■■■□□ 2.2
E4F1-207ENST00000565413 PLCH1Q4KWH8 1693 aa28.78■■■□□ 2.2
E4F1-207ENST00000565413 VPS72Q15906 364 aa28.78■■■□□ 2.2
E4F1-207ENST00000565413 GLI3P10071 1580 aa28.78■■■□□ 2.2
E4F1-207ENST00000565413 SRCAPQ6ZRS2 3230 aa28.77■■■□□ 2.2
E4F1-207ENST00000565413 PAK3O75914 559 aaPredicted RBP28.74■■■□□ 2.19
E4F1-207ENST00000565413 ZRANB1Q9UGI0 708 aa28.74■■■□□ 2.19
E4F1-207ENST00000565413 TRPM3Q9HCF6 1732 aaPredicted RBP28.74■■■□□ 2.19
E4F1-207ENST00000565413 PRR36Q9H6K5 1346 aa28.73■■■□□ 2.19
E4F1-207ENST00000565413 ITSN1Q15811 1721 aa28.73■■■□□ 2.19
E4F1-207ENST00000565413 ARHGEF28Q8N1W1 1705 aaKnown RBP28.73■■■□□ 2.19
E4F1-207ENST00000565413 SEPT12Q8IYM1 358 aa28.72■■■□□ 2.19
E4F1-207ENST00000565413 A0A0G2JS52 829 aa28.71■■■□□ 2.19
E4F1-207ENST00000565413 MYT1Q01538 1121 aa28.71■■■□□ 2.19
E4F1-207ENST00000565413 FAM83GA6ND36 823 aa28.7■■■□□ 2.18
E4F1-207ENST00000565413 SF3B2Q13435 895 aaKnown RBP28.7■■■□□ 2.18
E4F1-207ENST00000565413 ALS2Q96Q42 1657 aa28.7■■■□□ 2.18
E4F1-207ENST00000565413 BLMP54132 1417 aaPredicted RBP28.69■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms