RNA–Protein interactions for RNA: ENST00000564440.5

PKM-212, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 3,016 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-212ENST00000564440 ANKLE2Q86XL3 938 aa12.63□□□□□ -0.39
PKM-212ENST00000564440 STAG3Q9UJ98 1225 aa12.62□□□□□ -0.39
PKM-212ENST00000564440 FAM135BQ49AJ0 1406 aa12.62□□□□□ -0.39
PKM-212ENST00000564440 CDC42BPGQ6DT37 1551 aa12.62□□□□□ -0.39
PKM-212ENST00000564440 RALGAPBQ86X10 1494 aa12.61□□□□□ -0.39
PKM-212ENST00000564440 NALCNQ8IZF0 1738 aa12.61□□□□□ -0.39
PKM-212ENST00000564440 AEBP2Q6ZN18 517 aaPredicted RBP12.61□□□□□ -0.39
PKM-212ENST00000564440 CC2D1BQ5T0F9 858 aaKnown RBP12.6□□□□□ -0.39
PKM-212ENST00000564440 LRRC7Q96NW7 1537 aa12.6□□□□□ -0.39
PKM-212ENST00000564440 LTKP29376 864 aa12.59□□□□□ -0.39
PKM-212ENST00000564440 FMN2Q9NZ56 1722 aa12.59□□□□□ -0.39
PKM-212ENST00000564440 TOPAZ1Q8N9V7 1692 aa12.59□□□□□ -0.39
PKM-212ENST00000564440 PTPRUQ92729 1446 aa12.57□□□□□ -0.4
PKM-212ENST00000564440 NUTM2FA1L443 756 aa12.57□□□□□ -0.4
PKM-212ENST00000564440 VGFO15240 615 aaPredicted RBP12.57□□□□□ -0.4
PKM-212ENST00000564440 ABCC11Q96J66 1382 aa12.57□□□□□ -0.4
PKM-212ENST00000564440 LRPPRCP42704 1394 aaKnown RBP12.57□□□□□ -0.4
PKM-212ENST00000564440 CCDC7Q96M83 1385 aa12.57□□□□□ -0.4
PKM-212ENST00000564440 RBM33Q96EV2 1170 aaKnown RBP12.56□□□□□ -0.4
PKM-212ENST00000564440 EID1Q9Y6B2 187 aa12.56□□□□□ -0.4
PKM-212ENST00000564440 MSH5O43196 834 aa12.56□□□□□ -0.4
PKM-212ENST00000564440 TNNT2P45379 298 aaPredicted RBP12.56□□□□□ -0.4
PKM-212ENST00000564440 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.56□□□□□ -0.4
PKM-212ENST00000564440 PRKCSHP14314 528 aaPredicted RBP12.55□□□□□ -0.4
PKM-212ENST00000564440 ERICH6Q7L0X2 663 aa12.55□□□□□ -0.4
PKM-212ENST00000564440 ITSN1Q15811 1721 aa12.55□□□□□ -0.4
PKM-212ENST00000564440 USP54Q70EL1 1684 aa12.54□□□□□ -0.4
PKM-212ENST00000564440 C14orf93Q9H972 538 aaKnown RBP12.54□□□□□ -0.4
PKM-212ENST00000564440 PLEKHG5O94827 1062 aa12.54□□□□□ -0.4
PKM-212ENST00000564440 KIF1AQ12756 1690 aa12.54□□□□□ -0.4
PKM-212ENST00000564440 DISP3Q9P2K9 1392 aa12.54□□□□□ -0.4
PKM-212ENST00000564440 NHSL1Q5SYE7 1610 aa12.54□□□□□ -0.4
PKM-212ENST00000564440 IRX6P78412 446 aaPredicted RBP12.54□□□□□ -0.4
PKM-212ENST00000564440 FANCIQ9NVI1 1328 aa12.53□□□□□ -0.4
PKM-212ENST00000564440 SBNO2Q9Y2G9 1366 aa12.53□□□□□ -0.4
PKM-212ENST00000564440 KCNA6P17658 529 aa12.53□□□□□ -0.4
PKM-212ENST00000564440 MRS2Q9HD23 443 aa12.53□□□□□ -0.4
PKM-212ENST00000564440 HNRNPUQ00839 825 aaKnown RBP eCLIP12.52□□□□□ -0.4
PKM-212ENST00000564440 TMC1Q8TDI8 760 aa12.52□□□□□ -0.4
PKM-212ENST00000564440 QRICH2Q9H0J4 1663 aa12.52□□□□□ -0.41
PKM-212ENST00000564440 TXNDC2Q86VQ3 553 aa12.52□□□□□ -0.41
PKM-212ENST00000564440 NCKAP5LQ9HCH0 1330 aa12.52□□□□□ -0.41
PKM-212ENST00000564440 YTHDC2Q9H6S0 1430 aaKnown RBP12.51□□□□□ -0.41
PKM-212ENST00000564440 AHDC1Q5TGY3 1603 aaPredicted RBP12.5□□□□□ -0.41
PKM-212ENST00000564440 ADGRL3Q9HAR2 1447 aa12.5□□□□□ -0.41
PKM-212ENST00000564440 PANK3Q9H999 370 aa12.5□□□□□ -0.41
PKM-212ENST00000564440 USP32Q8NFA0 1604 aa12.49□□□□□ -0.41
PKM-212ENST00000564440 TESK2Q96S53 571 aa12.49□□□□□ -0.41
PKM-212ENST00000564440 PRKRIP1Q9H875 184 aaPredicted RBP12.49□□□□□ -0.41
PKM-212ENST00000564440 METP08581 1390 aa12.48□□□□□ -0.41
PKM-212ENST00000564440 HSPA2P54652 639 aa12.48□□□□□ -0.41
PKM-212ENST00000564440 MST1RQ04912 1400 aa12.48□□□□□ -0.41
PKM-212ENST00000564440 WAPLQ7Z5K2 1190 aa12.47□□□□□ -0.41
PKM-212ENST00000564440 SLC26A8Q96RN1 970 aa12.47□□□□□ -0.41
PKM-212ENST00000564440 MINK1Q8N4C8 1332 aaPredicted RBP12.47□□□□□ -0.41
PKM-212ENST00000564440 FBLN1P23142 703 aa12.46□□□□□ -0.41
PKM-212ENST00000564440 ANKARQ7Z5J8 1434 aa12.46□□□□□ -0.41
PKM-212ENST00000564440 COL22A1Q8NFW1 1626 aaPredicted RBP12.46□□□□□ -0.42
PKM-212ENST00000564440 AKAP12Q02952 1782 aa12.46□□□□□ -0.42
PKM-212ENST00000564440 CABP2Q9NPB3 220 aa12.46□□□□□ -0.42
PKM-212ENST00000564440 SLC12A5Q9H2X9 1139 aa12.45□□□□□ -0.42
PKM-212ENST00000564440 SHPRHQ149N8 1683 aa12.44□□□□□ -0.42
PKM-212ENST00000564440 ERICH6BQ5W0A0 696 aa12.43□□□□□ -0.42
PKM-212ENST00000564440 TULP4Q9NRJ4 1543 aa12.43□□□□□ -0.42
PKM-212ENST00000564440 CRYBG1Q9Y4K1 1723 aa12.43□□□□□ -0.42
PKM-212ENST00000564440 PUS7Q96PZ0 661 aaKnown RBP12.43□□□□□ -0.42
PKM-212ENST00000564440 TRPM3Q9HCF6 1732 aaPredicted RBP12.43□□□□□ -0.42
PKM-212ENST00000564440 NRKQ7Z2Y5 1582 aa12.42□□□□□ -0.42
PKM-212ENST00000564440 EIF3AQ14152 1382 aaKnown RBP12.41□□□□□ -0.42
PKM-212ENST00000564440 PPP4R2Q9NY27 417 aa12.41□□□□□ -0.42
PKM-212ENST00000564440 MON2Q7Z3U7 1717 aa12.41□□□□□ -0.42
PKM-212ENST00000564440 ROBO2Q9HCK4 1378 aa12.41□□□□□ -0.42
PKM-212ENST00000564440 TMF1P82094 1093 aa12.4□□□□□ -0.42
PKM-212ENST00000564440 MED1Q15648 1581 aaPredicted RBP12.4□□□□□ -0.42
PKM-212ENST00000564440 PRAM1Q96QH2 718 aa12.4□□□□□ -0.43
PKM-212ENST00000564440 COL16A1Q07092 1604 aaPredicted RBP12.39□□□□□ -0.43
PKM-212ENST00000564440 ROBO1Q9Y6N7 1651 aa12.39□□□□□ -0.43
PKM-212ENST00000564440 SOX12O15370 315 aa12.39□□□□□ -0.43
PKM-212ENST00000564440 MYOM1P52179 1685 aa12.38□□□□□ -0.43
PKM-212ENST00000564440 ALS2Q96Q42 1657 aa12.38□□□□□ -0.43
PKM-212ENST00000564440 SRPK2P78362 688 aaKnown RBP12.38□□□□□ -0.43
PKM-212ENST00000564440 BRD4O60885 1362 aaPredicted RBP12.38□□□□□ -0.43
PKM-212ENST00000564440 POGKQ9P215 609 aa12.38□□□□□ -0.43
PKM-212ENST00000564440 ZNF335Q9H4Z2 1342 aaPredicted RBP12.38□□□□□ -0.43
PKM-212ENST00000564440 RGPD8O14715 1765 aaPredicted RBP12.37□□□□□ -0.43
PKM-212ENST00000564440 CERKQ8TCT0 537 aa12.37□□□□□ -0.43
PKM-212ENST00000564440 ABCA3Q99758 1704 aa12.36□□□□□ -0.43
PKM-212ENST00000564440 MARF1Q9Y4F3 1742 aaKnown RBP12.36□□□□□ -0.43
PKM-212ENST00000564440 TMEM94Q12767 1356 aa12.36□□□□□ -0.43
PKM-212ENST00000564440 SLC24A1O60721 1099 aa12.36□□□□□ -0.43
PKM-212ENST00000564440 CARD14Q9BXL6 1004 aa12.35□□□□□ -0.43
PKM-212ENST00000564440 ATP7BP35670 1465 aa12.35□□□□□ -0.43
PKM-212ENST00000564440 PLEKHH1Q9ULM0 1364 aa12.35□□□□□ -0.43
PKM-212ENST00000564440 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.34□□□□□ -0.43
PKM-212ENST00000564440 CCDC146Q8IYE0 955 aa12.34□□□□□ -0.43
PKM-212ENST00000564440 AMOTL2Q9Y2J4 779 aa12.34□□□□□ -0.43
PKM-212ENST00000564440 CENPJQ9HC77 1338 aaPredicted RBP12.34□□□□□ -0.43
PKM-212ENST00000564440 PER1O15534 1290 aaPredicted RBP12.34□□□□□ -0.43
PKM-212ENST00000564440 DEKP35659 375 aaKnown RBP12.34□□□□□ -0.43
PKM-212ENST00000564440 PHRF1Q9P1Y6 1649 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms