RNA–Protein interactions for RNA: ENST00000564070.1

SPSB3-205, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 3

Gene SPSB3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-205ENST00000564070 LRP6O75581 1613 aa23.23■■□□□ 1.31
SPSB3-205ENST00000564070 AHDC1Q5TGY3 1603 aaPredicted RBP23.22■■□□□ 1.31
SPSB3-205ENST00000564070 SIRT1Q96EB6 747 aa23.21■■□□□ 1.31
SPSB3-205ENST00000564070 CDC42BPGQ6DT37 1551 aa23.2■■□□□ 1.3
SPSB3-205ENST00000564070 DLC1Q96QB1 1528 aa23.2■■□□□ 1.3
SPSB3-205ENST00000564070 DDX17Q92841 729 aaKnown RBP23.2■■□□□ 1.3
SPSB3-205ENST00000564070 SIN3AQ96ST3 1273 aa23.2■■□□□ 1.3
SPSB3-205ENST00000564070 WAPLQ7Z5K2 1190 aa23.18■■□□□ 1.3
SPSB3-205ENST00000564070 KIAA1210Q9ULL0 1709 aa23.18■■□□□ 1.3
SPSB3-205ENST00000564070 PLEKHH1Q9ULM0 1364 aa23.17■■□□□ 1.3
SPSB3-205ENST00000564070 SPATA31A6Q5VVP1 1343 aa23.16■■□□□ 1.3
SPSB3-205ENST00000564070 NUTM2BA6NNL0 878 aaPredicted RBP23.15■■□□□ 1.3
SPSB3-205ENST00000564070 NUTM2EB1AL46 878 aaPredicted RBP23.15■■□□□ 1.3
SPSB3-205ENST00000564070 NEUROD1Q13562 356 aa23.15■■□□□ 1.3
SPSB3-205ENST00000564070 NUTM2AQ8IVF1 878 aaPredicted RBP23.15■■□□□ 1.3
SPSB3-205ENST00000564070 L3MBTL2Q969R5 705 aa23.15■■□□□ 1.3
SPSB3-205ENST00000564070 C1orf167Q5SNV9 1468 aa23.15■■□□□ 1.3
SPSB3-205ENST00000564070 MEX3CQ5U5Q3 659 aaKnown RBP23.14■■□□□ 1.29
SPSB3-205ENST00000564070 SHPRHQ149N8 1683 aa23.13■■□□□ 1.29
SPSB3-205ENST00000564070 PRAM1Q96QH2 718 aa23.11■■□□□ 1.29
SPSB3-205ENST00000564070 NHSL1Q5SYE7 1610 aa23.11■■□□□ 1.29
SPSB3-205ENST00000564070 TRAK1Q9UPV9 953 aa23.1■■□□□ 1.29
SPSB3-205ENST00000564070 FMN2Q9NZ56 1722 aa23.08■■□□□ 1.29
SPSB3-205ENST00000564070 ORAI2Q96SN7 254 aa23.08■■□□□ 1.29
SPSB3-205ENST00000564070 PCGF6Q9BYE7 350 aa23.08■■□□□ 1.29
SPSB3-205ENST00000564070 POGKQ9P215 609 aa23.08■■□□□ 1.29
SPSB3-205ENST00000564070 ARHGEF28Q8N1W1 1705 aaKnown RBP23.08■■□□□ 1.28
SPSB3-205ENST00000564070 ADGRB2O60241 1585 aa23.07■■□□□ 1.28
SPSB3-205ENST00000564070 SAFB2Q14151 953 aaKnown RBP eCLIP23.05■■□□□ 1.28
SPSB3-205ENST00000564070 LRRC59Q96AG4 307 aaKnown RBP23.05■■□□□ 1.28
SPSB3-205ENST00000564070 TRPM1Q7Z4N2 1603 aa23.04■■□□□ 1.28
SPSB3-205ENST00000564070 TONSLQ96HA7 1378 aa23.03■■□□□ 1.28
SPSB3-205ENST00000564070 NBPF1Q3BBV0 1214 aa23.03■■□□□ 1.28
SPSB3-205ENST00000564070 ZNF772Q68DY9 489 aaPredicted RBP23.03■■□□□ 1.28
SPSB3-205ENST00000564070 PNPLA6Q8IY17 1366 aa23.02■■□□□ 1.28
SPSB3-205ENST00000564070 AFF2P51816 1311 aa23.01■■□□□ 1.27
SPSB3-205ENST00000564070 ESCO1Q5FWF5 840 aa23■■□□□ 1.27
SPSB3-205ENST00000564070 KIF1AQ12756 1690 aa22.98■■□□□ 1.27
SPSB3-205ENST00000564070 NUTM2FA1L443 756 aa22.98■■□□□ 1.27
SPSB3-205ENST00000564070 C8orf37Q96NL8 207 aa22.98■■□□□ 1.27
SPSB3-205ENST00000564070 ANKARQ7Z5J8 1434 aa22.98■■□□□ 1.27
SPSB3-205ENST00000564070 MINK1Q8N4C8 1332 aaPredicted RBP22.97■■□□□ 1.27
SPSB3-205ENST00000564070 EIF3AQ14152 1382 aaKnown RBP22.97■■□□□ 1.27
SPSB3-205ENST00000564070 RXRBP28702 533 aa22.96■■□□□ 1.27
SPSB3-205ENST00000564070 SOS2Q07890 1332 aaPredicted RBP22.96■■□□□ 1.27
SPSB3-205ENST00000564070 ROCK2O75116 1388 aaKnown RBP22.95■■□□□ 1.26
SPSB3-205ENST00000564070 ADAMTS2O95450 1211 aa22.95■■□□□ 1.26
SPSB3-205ENST00000564070 NPHP3Q7Z494 1330 aa22.95■■□□□ 1.26
SPSB3-205ENST00000564070 HIRIP3Q9BW71 556 aaPredicted RBP22.95■■□□□ 1.26
SPSB3-205ENST00000564070 CLSPNQ9HAW4 1339 aa22.95■■□□□ 1.26
SPSB3-205ENST00000564070 USP32Q8NFA0 1604 aa22.94■■□□□ 1.26
SPSB3-205ENST00000564070 TULP4Q9NRJ4 1543 aa22.94■■□□□ 1.26
SPSB3-205ENST00000564070 WASLO00401 505 aaPredicted RBP22.93■■□□□ 1.26
SPSB3-205ENST00000564070 NBPF8Q3BBV2 869 aa22.93■■□□□ 1.26
SPSB3-205ENST00000564070 RGPD8O14715 1765 aaPredicted RBP22.93■■□□□ 1.26
SPSB3-205ENST00000564070 PXDNQ92626 1479 aa22.92■■□□□ 1.26
SPSB3-205ENST00000564070 GPRASP1Q5JY77 1395 aa22.91■■□□□ 1.26
SPSB3-205ENST00000564070 XPCQ01831 940 aaPredicted RBP22.91■■□□□ 1.26
SPSB3-205ENST00000564070 CENPJQ9HC77 1338 aaPredicted RBP22.9■■□□□ 1.26
SPSB3-205ENST00000564070 FOXO3O43524 673 aa22.9■■□□□ 1.26
SPSB3-205ENST00000564070 UPF1Q92900 1129 aaKnown RBP eCLIP22.9■■□□□ 1.26
SPSB3-205ENST00000564070 QTRT2Q9H974 415 aaKnown RBP22.9■■□□□ 1.26
SPSB3-205ENST00000564070 RALGAPBQ86X10 1494 aa22.9■■□□□ 1.26
SPSB3-205ENST00000564070 PHF8Q9UPP1 1060 aa22.89■■□□□ 1.25
SPSB3-205ENST00000564070 QRICH2Q9H0J4 1663 aa22.89■■□□□ 1.25
SPSB3-205ENST00000564070 NGLY1Q96IV0 654 aa22.88■■□□□ 1.25
SPSB3-205ENST00000564070 PRR36Q9H6K5 1346 aa22.86■■□□□ 1.25
SPSB3-205ENST00000564070 ATP7BP35670 1465 aa22.85■■□□□ 1.25
SPSB3-205ENST00000564070 ITSN1Q15811 1721 aa22.85■■□□□ 1.25
SPSB3-205ENST00000564070 COL22A1Q8NFW1 1626 aaPredicted RBP22.85■■□□□ 1.25
SPSB3-205ENST00000564070 CDK19Q9BWU1 502 aa22.84■■□□□ 1.25
SPSB3-205ENST00000564070 TIMELESSQ9UNS1 1208 aa22.83■■□□□ 1.25
SPSB3-205ENST00000564070 RGS12O14924 1447 aa22.82■■□□□ 1.24
SPSB3-205ENST00000564070 CDK12Q9NYV4 1490 aaPredicted RBP22.82■■□□□ 1.24
SPSB3-205ENST00000564070 RBM6P78332 1123 aaKnown RBP22.82■■□□□ 1.24
SPSB3-205ENST00000564070 CARD11Q9BXL7 1154 aa22.82■■□□□ 1.24
SPSB3-205ENST00000564070 TOPAZ1Q8N9V7 1692 aa22.81■■□□□ 1.24
SPSB3-205ENST00000564070 KRT28Q7Z3Y7 464 aa22.81■■□□□ 1.24
SPSB3-205ENST00000564070 PMFBP1Q8TBY8 1022 aa22.81■■□□□ 1.24
SPSB3-205ENST00000564070 NUDT16Q96DE0 195 aaKnown RBP22.81■■□□□ 1.24
SPSB3-205ENST00000564070 PSME1Q06323 249 aa22.8■■□□□ 1.24
SPSB3-205ENST00000564070 USP21Q9UK80 565 aa22.8■■□□□ 1.24
SPSB3-205ENST00000564070 CCER1Q8TC90 406 aaPredicted RBP22.79■■□□□ 1.24
SPSB3-205ENST00000564070 SPATA31A3Q5VYP0 1347 aa22.79■■□□□ 1.24
SPSB3-205ENST00000564070 SBNO1A3KN83 1393 aa22.78■■□□□ 1.24
SPSB3-205ENST00000564070 TNS3Q68CZ2 1445 aa22.78■■□□□ 1.24
SPSB3-205ENST00000564070 FNBP4Q8N3X1 1017 aaPredicted RBP22.77■■□□□ 1.24
SPSB3-205ENST00000564070 SRPK2P78362 688 aaKnown RBP22.76■■□□□ 1.23
SPSB3-205ENST00000564070 CCDC61Q9Y6R9 512 aa22.76■■□□□ 1.23
SPSB3-205ENST00000564070 SBNO2Q9Y2G9 1366 aa22.76■■□□□ 1.23
SPSB3-205ENST00000564070 TRPM3Q9HCF6 1732 aaPredicted RBP22.75■■□□□ 1.23
SPSB3-205ENST00000564070 EVC2Q86UK5 1308 aa22.75■■□□□ 1.23
SPSB3-205ENST00000564070 NGDNQ8NEJ9 315 aaKnown RBP22.74■■□□□ 1.23
SPSB3-205ENST00000564070 TRPC5Q9UL62 973 aaPredicted RBP22.73■■□□□ 1.23
SPSB3-205ENST00000564070 POLR3AO14802 1390 aaPredicted RBP22.73■■□□□ 1.23
SPSB3-205ENST00000564070 ARHGEF10O15013 1369 aa22.73■■□□□ 1.23
SPSB3-205ENST00000564070 CABP2Q9NPB3 220 aa22.72■■□□□ 1.23
SPSB3-205ENST00000564070 ATRNO75882 1429 aa22.72■■□□□ 1.23
SPSB3-205ENST00000564070 PLEKHG3A1L390 1219 aa22.71■■□□□ 1.23
SPSB3-205ENST00000564070 PLEKHG5O94827 1062 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms